FFCP PHASE1:Hg19::chr9:95298256..95298282,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1842|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3154|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_uc004ash.2_5end|coexpression_cluster_id=C4558|description=CAGE_peak_1_at_ECM2_5end|id=chr9:95298256..95298282,-|ontology_enrichment_celltype=CL:0000136!6.60e-10!15|ontology_enrichment_celltype_v019=CL:0000136;8.71e-10;13|ontology_enrichment_celltype_v019_2=CL:0000136,4.22e-11,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!8.45e-38!115;UBERON:0001049!2.61e-19!57;UBERON:0005068!2.61e-19!57;UBERON:0006241!2.61e-19!57;UBERON:0007135!2.61e-19!57;UBERON:0002616!2.95e-19!59;UBERON:0001017!8.74e-17!82;UBERON:0005743!6.23e-16!86;UBERON:0000955!1.40e-15!69;UBERON:0006238!1.40e-15!69;UBERON:0003080!9.99e-15!42;UBERON:0000073!1.45e-14!94;UBERON:0001016!1.45e-14!94;UBERON:0002780!4.06e-14!41;UBERON:0001890!4.06e-14!41;UBERON:0006240!4.06e-14!41;UBERON:0003075!8.62e-13!86;UBERON:0007284!8.62e-13!86;UBERON:0002346!1.27e-12!90;UBERON:0000475!4.29e-11!365;UBERON:0002020!7.72e-11!34;UBERON:0003528!7.72e-11!34;UBERON:0001893!1.15e-10!34;UBERON:0000153!1.21e-10!129;UBERON:0007811!1.21e-10!129;UBERON:0002791!2.33e-10!33;UBERON:0000924!2.44e-10!173;UBERON:0006601!2.44e-10!173;UBERON:0004121!2.62e-10!169;UBERON:0000033!6.61e-10!123;UBERON:0001869!1.47e-09!32;UBERON:0003056!1.71e-07!61;UBERON:0000062!2.34e-07!511;UBERON:0000956!4.95e-07!25;UBERON:0000203!4.95e-07!25;UBERON:0000468!9.51e-07!659|ontology_enrichment_uberon_v019=UBERON:0007023;1.77e-10;114!UBERON:0000073;1.20e-07;53!UBERON:0002616;1.20e-07;53!UBERON:0004457;1.59e-07;9!UBERON:0000042;1.59e-07;9!UBERON:0002780;1.73e-07;41!UBERON:0001890;1.73e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.99e-37,114;UBERON:0001049,1.14e-14,56;UBERON:0005068,1.14e-14,56;UBERON:0006241,1.14e-14,56;UBERON:0007135,1.14e-14,56;UBERON:0000073,1.67e-12,53;UBERON:0002616,1.67e-12,53;UBERON:0001017,5.34e-12,81;UBERON:0010314,3.52e-11,132;UBERON:0003075,6.57e-11,82;UBERON:0007284,6.57e-11,82;UBERON:0001016,6.88e-11,89;UBERON:0000955,8.35e-11,68;UBERON:0006238,8.35e-11,68;UBERON:0002346,1.82e-10,86;UBERON:0002780,4.96e-09,41;UBERON:0001890,4.96e-09,41;UBERON:0003080,4.96e-09,41;UBERON:0006240,4.96e-09,41;UBERON:0010371,5.08e-09,104;UBERON:0011216,9.04e-09,223;UBERON:0004121,3.91e-08,171;UBERON:0000924,3.91e-08,171;UBERON:0006601,3.91e-08,171;UBERON:0003076,1.92e-07,15;UBERON:0003057,1.92e-07,15|phase1_expression=26.8884001320424,26.1202639146999,35.2386010239928,5.00366491765652,14.3027550216732,8.72338524100369,0,0.631719873426831,4.17897005119742,0,0,0,0,0.990130823680373,1.98838425436749,0,0,0,0,0,0,0,0.572471974262113,0.273748850145768,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3806866313962,0,0.12786256184353,4.69870898099936,20.5548543360715,21.8718243630844,4.7717156823066,3.40644409211845,0,0,0,3.33996642519167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8849341644221,1.64619665163954,0.529636723252875,6.02356903572509,0,1.68203280042692,0,0,2.48968828319813,0,0,3.17850598054356,5.76175924479999,0,0,0,0,0,0,0,0.408308342509787,0,0.309977343527296,2.37600571456411,3.95627086845691,0,0,0.336672227908132,0,0,2.19488810440419,5.51678032438235,4.8076178850111,0.113432183160021,1.79389635688862,29.6844770457809,10.172731255659,0.300091096084402,2.06105058476878,0.515281080091258,2.41951913231067,0.843881661206331,1.75386609290158,3.02920529092937,21.539676282298,16.6495438523376,2.4850671476163,1.30977727695932,0.339121184620975,0,0,0,0,0,0,0,0,0,1.56449532329816,2.57296375277154,0,34.3632266743665,14.4375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,2.94848165003288,1.18157981336281,0,0.368965315629341,0,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.414656231081544,0.432359860250884,0.37872730027914,0,0,0,1.71072446022705,0,0,0,0,0.43596006883328,0,0,0,0,2.39344304926383,2.08014873822732,0,0,0,1.71573592389777,0,0,0,0.710783897485092,0,1.20575750823834,0,0.099972991182057,0,0,0,7.90762023122223,18.3779097334582,0,1.59259437334337,0.410952645100767,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,1.91381625495949,0,0,0,26.1332877361768,3.50119364741774,0.542530047399471,34.1072212910524,10.5273103390325,17.1895632386989,56.2278791965023,8.12554469264841,9.09630016223939,1.03473071292505,0.664225598535437,0.368738337083406,1.04260337361699,0.391602314925481,1.37257369524342,0,0,0,0,0,0,21.3372714724148,21.0242903404646,14.0330047216537,19.4771506868665,15.3512174720011,4.82561763430822,0,0,0.177561725313127,0.246381468041427,0.519254429183621,0.11621037845995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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1842 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3154 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc004ash.2_5end | |||
|coexpression_cluster_id=C4558 | |||
|description=CAGE_peak_1_at_ECM2_5end | |||
|id=chr9:95298256..95298282,- | |||
|ontology_enrichment_celltype=CL:0000136!6.60e-10!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;8.71e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.22e-11,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.45e-38!115;UBERON:0001049!2.61e-19!57;UBERON:0005068!2.61e-19!57;UBERON:0006241!2.61e-19!57;UBERON:0007135!2.61e-19!57;UBERON:0002616!2.95e-19!59;UBERON:0001017!8.74e-17!82;UBERON:0005743!6.23e-16!86;UBERON:0000955!1.40e-15!69;UBERON:0006238!1.40e-15!69;UBERON:0003080!9.99e-15!42;UBERON:0000073!1.45e-14!94;UBERON:0001016!1.45e-14!94;UBERON:0002780!4.06e-14!41;UBERON:0001890!4.06e-14!41;UBERON:0006240!4.06e-14!41;UBERON:0003075!8.62e-13!86;UBERON:0007284!8.62e-13!86;UBERON:0002346!1.27e-12!90;UBERON:0000475!4.29e-11!365;UBERON:0002020!7.72e-11!34;UBERON:0003528!7.72e-11!34;UBERON:0001893!1.15e-10!34;UBERON:0000153!1.21e-10!129;UBERON:0007811!1.21e-10!129;UBERON:0002791!2.33e-10!33;UBERON:0000924!2.44e-10!173;UBERON:0006601!2.44e-10!173;UBERON:0004121!2.62e-10!169;UBERON:0000033!6.61e-10!123;UBERON:0001869!1.47e-09!32;UBERON:0003056!1.71e-07!61;UBERON:0000062!2.34e-07!511;UBERON:0000956!4.95e-07!25;UBERON:0000203!4.95e-07!25;UBERON:0000468!9.51e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.77e-10;114!UBERON:0000073;1.20e-07;53!UBERON:0002616;1.20e-07;53!UBERON:0004457;1.59e-07;9!UBERON:0000042;1.59e-07;9!UBERON:0002780;1.73e-07;41!UBERON:0001890;1.73e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.99e-37,114;UBERON:0001049,1.14e-14,56;UBERON:0005068,1.14e-14,56;UBERON:0006241,1.14e-14,56;UBERON:0007135,1.14e-14,56;UBERON:0000073,1.67e-12,53;UBERON:0002616,1.67e-12,53;UBERON:0001017,5.34e-12,81;UBERON:0010314,3.52e-11,132;UBERON:0003075,6.57e-11,82;UBERON:0007284,6.57e-11,82;UBERON:0001016,6.88e-11,89;UBERON:0000955,8.35e-11,68;UBERON:0006238,8.35e-11,68;UBERON:0002346,1.82e-10,86;UBERON:0002780,4.96e-09,41;UBERON:0001890,4.96e-09,41;UBERON:0003080,4.96e-09,41;UBERON:0006240,4.96e-09,41;UBERON:0010371,5.08e-09,104;UBERON:0011216,9.04e-09,223;UBERON:0004121,3.91e-08,171;UBERON:0000924,3.91e-08,171;UBERON:0006601,3.91e-08,171;UBERON:0003076,1.92e-07,15;UBERON:0003057,1.92e-07,15 | |||
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| |||
|short_description=p1@ECM2 | |||
}} |
Revision as of 09:48, 14 September 2013
Short description: | p1@ECM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ECM2_5end |
Coexpression cluster: | C4558_mature_heart_mesodermal_lung_skin_diaphragm_eye |
Association with transcript: | 0bp_to_uc004ash.2_5end |
EntrezGene: | ECM2 |
HGNC: | 3154 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.22e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.99e-37 | 114 |
neural tube | 1.14e-14 | 56 |
neural rod | 1.14e-14 | 56 |
future spinal cord | 1.14e-14 | 56 |
neural keel | 1.14e-14 | 56 |
regional part of nervous system | 1.67e-12 | 53 |
regional part of brain | 1.67e-12 | 53 |
central nervous system | 5.34e-12 | 81 |
structure with developmental contribution from neural crest | 3.52e-11 | 132 |
neural plate | 6.57e-11 | 82 |
presumptive neural plate | 6.57e-11 | 82 |
nervous system | 6.88e-11 | 89 |
brain | 8.35e-11 | 68 |
future brain | 8.35e-11 | 68 |
neurectoderm | 1.82e-10 | 86 |
regional part of forebrain | 4.96e-09 | 41 |
forebrain | 4.96e-09 | 41 |
anterior neural tube | 4.96e-09 | 41 |
future forebrain | 4.96e-09 | 41 |
ecto-epithelium | 5.08e-09 | 104 |
organ system subdivision | 9.04e-09 | 223 |
ectoderm-derived structure | 3.91e-08 | 171 |
ectoderm | 3.91e-08 | 171 |
presumptive ectoderm | 3.91e-08 | 171 |
posterior neural tube | 1.92e-07 | 15 |
chordal neural plate | 1.92e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.