FFCP PHASE1:Mm9::chr6:41503536..41503558,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=33|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:41503536..41503558,+|id=chr6:41503536..41503558,+|ontology_enrichment_celltype=CL:0000838!2.06e-15!12;CL:0000791!3.04e-15!9;CL:0000789!3.04e-15!9;CL:0002420!3.04e-15!9;CL:0002419!3.04e-15!9;CL:0000790!3.04e-15!9;CL:0000084!1.58e-14!11;CL:0000827!1.58e-14!11;CL:0000542!5.43e-14!13;CL:0000051!5.43e-14!13;CL:0000624!1.16e-13!8;CL:0002031!1.28e-11!25;CL:0000893!2.13e-10!6;CL:0002489!2.13e-10!6;CL:0000898!2.13e-10!6;CL:0000809!2.13e-10!6;CL:0000810!2.13e-10!6;CL:0000895!2.13e-10!6;CL:0000808!2.13e-10!6;CL:0000894!2.13e-10!6;CL:0000806!2.13e-10!6;CL:0000807!2.13e-10!6;CL:0000805!2.13e-10!6;CL:0002425!2.13e-10!6;CL:0002436!2.13e-10!6;CL:0002427!2.13e-10!6;CL:0002428!2.13e-10!6;CL:0002429!2.13e-10!6;CL:0002433!2.13e-10!6;CL:0002431!2.13e-10!6;CL:0002432!2.13e-10!6;CL:0000738!5.34e-10!17;CL:0002087!5.34e-10!17;CL:0000988!3.55e-08!32;CL:0002032!3.55e-08!32;CL:0000037!3.55e-08!32;CL:0000566!3.55e-08!32;CL:0000837!3.55e-08!32|ontology_enrichment_celltype_v019_2=CL:0000791,3.34e-30,9;CL:0000789,3.34e-30,9;CL:0002420,3.34e-30,9;CL:0002419,3.34e-30,9;CL:0000790,3.34e-30,9;CL:0000624,7.07e-27,8;CL:0000084,1.93e-24,11;CL:0000827,1.93e-24,11;CL:0000838,2.80e-22,12;CL:0000542,1.89e-20,13;CL:0000051,1.89e-20,13;CL:0000893,4.94e-20,6;CL:0002489,4.94e-20,6;CL:0000898,4.94e-20,6;CL:0000809,4.94e-20,6;CL:0000810,4.94e-20,6;CL:0000895,4.94e-20,6;CL:0000808,4.94e-20,6;CL:0000894,4.94e-20,6;CL:0000806,4.94e-20,6;CL:0000807,4.94e-20,6;CL:0000805,4.94e-20,6;CL:0002425,4.94e-20,6;CL:0002436,4.94e-20,6;CL:0002427,4.94e-20,6;CL:0002428,4.94e-20,6;CL:0002429,4.94e-20,6;CL:0002433,4.94e-20,6;CL:0002431,4.94e-20,6;CL:0002432,4.94e-20,6;CL:0002031,2.82e-17,25;CL:0000738,2.80e-15,17;CL:0002087,2.80e-15,17;CL:0000988,5.38e-13,32;CL:0002032,5.38e-13,32;CL:0000037,5.38e-13,32;CL:0000837,5.38e-13,32;CL:0002320,2.38e-08,46;CL:0000134,2.38e-08,46;CL:0000219,8.80e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!3.22e-26!23;UBERON:0000974!3.22e-26!23;UBERON:0004807!3.22e-26!23;UBERON:0005058!3.22e-26!23;UBERON:0003351!3.22e-26!23;UBERON:0009113!3.22e-26!23;UBERON:0003295!3.22e-26!23;UBERON:0009722!3.22e-26!23;UBERON:0005562!3.22e-26!23;UBERON:0007690!3.22e-26!23;UBERON:0004177!9.41e-26!29;UBERON:0006562!7.43e-25!24;UBERON:0003408!7.43e-25!24;UBERON:0001557!7.43e-25!24;UBERON:0001042!7.43e-25!24;UBERON:0008814!7.43e-25!24;UBERON:0009145!7.43e-25!24;UBERON:0000065!3.71e-22!41;UBERON:0001004!1.96e-21!42;UBERON:0000072!2.22e-21!27;UBERON:0002390!1.43e-20!45;UBERON:0003061!1.43e-20!45;UBERON:0002193!1.74e-20!48;UBERON:0000063!4.63e-15!35;UBERON:0005057!5.40e-14!51;UBERON:0002405!1.68e-13!70;UBERON:0005911!6.36e-12!69;UBERON:0001041!4.32e-10!92;UBERON:0003081!7.75e-10!88;UBERON:0003929!2.79e-09!55;UBERON:0000077!4.02e-09!97;UBERON:0002368!5.28e-08!60;UBERON:0002530!9.27e-08!65;UBERON:0004921!2.18e-07!126;UBERON:0004185!2.18e-07!126;UBERON:0001007!3.96e-07!128;UBERON:0001555!3.96e-07!128;UBERON:0007026!3.96e-07!128;UBERON:0004119!7.02e-07!130;UBERON:0000925!7.02e-07!130;UBERON:0006595!7.02e-07!130;UBERON:0000490!9.58e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.02e-49,23;UBERON:0000974,1.02e-49,23;UBERON:0004807,1.02e-49,23;UBERON:0005058,1.02e-49,23;UBERON:0003351,1.02e-49,23;UBERON:0009113,1.02e-49,23;UBERON:0003295,1.02e-49,23;UBERON:0009722,1.02e-49,23;UBERON:0005562,1.02e-49,23;UBERON:0007690,1.02e-49,23;UBERON:0006562,1.70e-47,24;UBERON:0003408,1.70e-47,24;UBERON:0001557,1.70e-47,24;UBERON:0001042,1.70e-47,24;UBERON:0008814,1.70e-47,24;UBERON:0009145,1.70e-47,24;UBERON:0000072,8.14e-42,27;UBERON:0004177,1.11e-38,29;UBERON:0005057,1.11e-38,29;UBERON:0002193,1.11e-32,48;UBERON:0002405,1.11e-32,48;UBERON:0002390,5.13e-32,45;UBERON:0003061,5.13e-32,45;UBERON:0000077,2.02e-31,35;UBERON:0007811,1.91e-30,36;UBERON:0000065,2.79e-26,41;UBERON:0001004,1.45e-25,42;UBERON:0000153,6.94e-25,43;UBERON:0003929,1.22e-18,55;UBERON:0002368,8.99e-17,60;UBERON:0002530,3.42e-15,65;UBERON:0000949,6.30e-15,72;UBERON:0000490,6.63e-15,66;UBERON:0003081,1.46e-14,87;UBERON:0005911,4.30e-14,69;UBERON:0001041,1.24e-11,80;UBERON:0000926,2.16e-09,120;UBERON:0004120,2.16e-09,120;UBERON:0006603,2.16e-09,120;UBERON:0002384,2.38e-08,46;UBERON:0004921,4.91e-07,114;UBERON:0001007,7.54e-07,116;UBERON:0001555,7.54e-07,116;UBERON:0007026,7.54e-07,116|phase1_expression=0,0,0,0,0,0,0,101.361808901637,11.6854639385883,10.7669682108117,7.87602653837323,7.17949430958028,72.5891094908312,49.7422089764095,0,0.809901069559304,0,2.5236973228659,1.50825876966313,1.69755860719212,0.255129870453209,0.297872853602656,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,46.423177088726,40.3312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583826711835847,0,0,0,0.438599962275997,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,0.554259570499814,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0.341741761595705,0,0,0,0.410082683163076,0.228778173206523,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.917123183446,0.810900861160657,1.64337531463724,2.85825810551149,5.90788095702689,13.7090134799073,14.6638448414362,15.0643317718069,17.770095190874,17.07032469072,12.9057516975156,16.2754660835387,28.7673406504585,41.9588078831833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0.701794825336225,0.644613162144895,0,0.441182838239031,0|short_description=p@chr6:41503536..41503558,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:41503536..41503558,+ | |||
|id=chr6:41503536..41503558,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.06e-15!12;CL:0000791!3.04e-15!9;CL:0000789!3.04e-15!9;CL:0002420!3.04e-15!9;CL:0002419!3.04e-15!9;CL:0000790!3.04e-15!9;CL:0000084!1.58e-14!11;CL:0000827!1.58e-14!11;CL:0000542!5.43e-14!13;CL:0000051!5.43e-14!13;CL:0000624!1.16e-13!8;CL:0002031!1.28e-11!25;CL:0000893!2.13e-10!6;CL:0002489!2.13e-10!6;CL:0000898!2.13e-10!6;CL:0000809!2.13e-10!6;CL:0000810!2.13e-10!6;CL:0000895!2.13e-10!6;CL:0000808!2.13e-10!6;CL:0000894!2.13e-10!6;CL:0000806!2.13e-10!6;CL:0000807!2.13e-10!6;CL:0000805!2.13e-10!6;CL:0002425!2.13e-10!6;CL:0002436!2.13e-10!6;CL:0002427!2.13e-10!6;CL:0002428!2.13e-10!6;CL:0002429!2.13e-10!6;CL:0002433!2.13e-10!6;CL:0002431!2.13e-10!6;CL:0002432!2.13e-10!6;CL:0000738!5.34e-10!17;CL:0002087!5.34e-10!17;CL:0000988!3.55e-08!32;CL:0002032!3.55e-08!32;CL:0000037!3.55e-08!32;CL:0000566!3.55e-08!32;CL:0000837!3.55e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.34e-30,9;CL:0000789,3.34e-30,9;CL:0002420,3.34e-30,9;CL:0002419,3.34e-30,9;CL:0000790,3.34e-30,9;CL:0000624,7.07e-27,8;CL:0000084,1.93e-24,11;CL:0000827,1.93e-24,11;CL:0000838,2.80e-22,12;CL:0000542,1.89e-20,13;CL:0000051,1.89e-20,13;CL:0000893,4.94e-20,6;CL:0002489,4.94e-20,6;CL:0000898,4.94e-20,6;CL:0000809,4.94e-20,6;CL:0000810,4.94e-20,6;CL:0000895,4.94e-20,6;CL:0000808,4.94e-20,6;CL:0000894,4.94e-20,6;CL:0000806,4.94e-20,6;CL:0000807,4.94e-20,6;CL:0000805,4.94e-20,6;CL:0002425,4.94e-20,6;CL:0002436,4.94e-20,6;CL:0002427,4.94e-20,6;CL:0002428,4.94e-20,6;CL:0002429,4.94e-20,6;CL:0002433,4.94e-20,6;CL:0002431,4.94e-20,6;CL:0002432,4.94e-20,6;CL:0002031,2.82e-17,25;CL:0000738,2.80e-15,17;CL:0002087,2.80e-15,17;CL:0000988,5.38e-13,32;CL:0002032,5.38e-13,32;CL:0000037,5.38e-13,32;CL:0000837,5.38e-13,32;CL:0002320,2.38e-08,46;CL:0000134,2.38e-08,46;CL:0000219,8.80e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!3.22e-26!23;UBERON:0000974!3.22e-26!23;UBERON:0004807!3.22e-26!23;UBERON:0005058!3.22e-26!23;UBERON:0003351!3.22e-26!23;UBERON:0009113!3.22e-26!23;UBERON:0003295!3.22e-26!23;UBERON:0009722!3.22e-26!23;UBERON:0005562!3.22e-26!23;UBERON:0007690!3.22e-26!23;UBERON:0004177!9.41e-26!29;UBERON:0006562!7.43e-25!24;UBERON:0003408!7.43e-25!24;UBERON:0001557!7.43e-25!24;UBERON:0001042!7.43e-25!24;UBERON:0008814!7.43e-25!24;UBERON:0009145!7.43e-25!24;UBERON:0000065!3.71e-22!41;UBERON:0001004!1.96e-21!42;UBERON:0000072!2.22e-21!27;UBERON:0002390!1.43e-20!45;UBERON:0003061!1.43e-20!45;UBERON:0002193!1.74e-20!48;UBERON:0000063!4.63e-15!35;UBERON:0005057!5.40e-14!51;UBERON:0002405!1.68e-13!70;UBERON:0005911!6.36e-12!69;UBERON:0001041!4.32e-10!92;UBERON:0003081!7.75e-10!88;UBERON:0003929!2.79e-09!55;UBERON:0000077!4.02e-09!97;UBERON:0002368!5.28e-08!60;UBERON:0002530!9.27e-08!65;UBERON:0004921!2.18e-07!126;UBERON:0004185!2.18e-07!126;UBERON:0001007!3.96e-07!128;UBERON:0001555!3.96e-07!128;UBERON:0007026!3.96e-07!128;UBERON:0004119!7.02e-07!130;UBERON:0000925!7.02e-07!130;UBERON:0006595!7.02e-07!130;UBERON:0000490!9.58e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.02e-49,23;UBERON:0000974,1.02e-49,23;UBERON:0004807,1.02e-49,23;UBERON:0005058,1.02e-49,23;UBERON:0003351,1.02e-49,23;UBERON:0009113,1.02e-49,23;UBERON:0003295,1.02e-49,23;UBERON:0009722,1.02e-49,23;UBERON:0005562,1.02e-49,23;UBERON:0007690,1.02e-49,23;UBERON:0006562,1.70e-47,24;UBERON:0003408,1.70e-47,24;UBERON:0001557,1.70e-47,24;UBERON:0001042,1.70e-47,24;UBERON:0008814,1.70e-47,24;UBERON:0009145,1.70e-47,24;UBERON:0000072,8.14e-42,27;UBERON:0004177,1.11e-38,29;UBERON:0005057,1.11e-38,29;UBERON:0002193,1.11e-32,48;UBERON:0002405,1.11e-32,48;UBERON:0002390,5.13e-32,45;UBERON:0003061,5.13e-32,45;UBERON:0000077,2.02e-31,35;UBERON:0007811,1.91e-30,36;UBERON:0000065,2.79e-26,41;UBERON:0001004,1.45e-25,42;UBERON:0000153,6.94e-25,43;UBERON:0003929,1.22e-18,55;UBERON:0002368,8.99e-17,60;UBERON:0002530,3.42e-15,65;UBERON:0000949,6.30e-15,72;UBERON:0000490,6.63e-15,66;UBERON:0003081,1.46e-14,87;UBERON:0005911,4.30e-14,69;UBERON:0001041,1.24e-11,80;UBERON:0000926,2.16e-09,120;UBERON:0004120,2.16e-09,120;UBERON:0006603,2.16e-09,120;UBERON:0002384,2.38e-08,46;UBERON:0004921,4.91e-07,114;UBERON:0001007,7.54e-07,116;UBERON:0001555,7.54e-07,116;UBERON:0007026,7.54e-07,116 | |||
|phase1_expression=0,0,0,0,0,0,0,101.361808901637,11.6854639385883,10.7669682108117,7.87602653837323,7.17949430958028,72.5891094908312,49.7422089764095,0,0.809901069559304,0,2.5236973228659,1.50825876966313,1.69755860719212,0.255129870453209,0.297872853602656,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,46.423177088726,40.3312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583826711835847,0,0,0,0.438599962275997,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,0.554259570499814,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0.341741761595705,0,0,0,0.410082683163076,0.228778173206523,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.917123183446,0.810900861160657,1.64337531463724,2.85825810551149,5.90788095702689,13.7090134799073,14.6638448414362,15.0643317718069,17.770095190874,17.07032469072,12.9057516975156,16.2754660835387,28.7673406504585,41.9588078831833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0.701794825336225,0.644613162144895,0,0.441182838239031,0 | |||
|short_description=p@chr6:41503536..41503558,+ | |||
}} |
Revision as of 09:57, 14 September 2013
Short description: | p@chr6:41503536..41503558, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:41503536..41503558, + |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.