FFCP PHASE1:Mm9::chr7:25692325..25692345,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16801|HGNC=|MCL_coexpression_id=33|UniProt=D3YVJ9|association_with_transcript=-320bp_to_ENSMUST00000151121_5end|description=CAGE_peak_6_at_Arhgef1_5end|id=chr7:25692325..25692345,+|ontology_enrichment_celltype=CL:0000838!8.72e-12!12;CL:0000791!1.10e-11!9;CL:0000789!1.10e-11!9;CL:0002420!1.10e-11!9;CL:0002419!1.10e-11!9;CL:0000790!1.10e-11!9;CL:0000084!8.71e-11!11;CL:0000827!8.71e-11!11;CL:0000542!1.33e-10!13;CL:0000051!1.33e-10!13;CL:0000624!1.73e-10!8;CL:0002031!1.64e-09!25;CL:0000988!3.27e-08!32;CL:0002032!3.27e-08!32;CL:0000037!3.27e-08!32;CL:0000566!3.27e-08!32;CL:0000837!3.27e-08!32;CL:0000893!4.61e-08!6;CL:0002489!4.61e-08!6;CL:0000898!4.61e-08!6;CL:0000809!4.61e-08!6;CL:0000810!4.61e-08!6;CL:0000895!4.61e-08!6;CL:0000808!4.61e-08!6;CL:0000894!4.61e-08!6;CL:0000806!4.61e-08!6;CL:0000807!4.61e-08!6;CL:0000805!4.61e-08!6;CL:0002425!4.61e-08!6;CL:0002436!4.61e-08!6;CL:0002427!4.61e-08!6;CL:0002428!4.61e-08!6;CL:0002429!4.61e-08!6;CL:0002433!4.61e-08!6;CL:0002431!4.61e-08!6;CL:0002432!4.61e-08!6;CL:0000738!2.62e-07!17;CL:0002087!2.62e-07!17|ontology_enrichment_celltype_v019_2=CL:0000791,5.71e-27,9;CL:0000789,5.71e-27,9;CL:0002420,5.71e-27,9;CL:0002419,5.71e-27,9;CL:0000790,5.71e-27,9;CL:0000838,2.92e-24,12;CL:0000624,5.94e-24,8;CL:0000542,2.99e-22,13;CL:0000051,2.99e-22,13;CL:0000084,8.83e-22,11;CL:0000827,8.83e-22,11;CL:0002031,3.84e-18,25;CL:0000893,7.23e-18,6;CL:0002489,7.23e-18,6;CL:0000898,7.23e-18,6;CL:0000809,7.23e-18,6;CL:0000810,7.23e-18,6;CL:0000895,7.23e-18,6;CL:0000808,7.23e-18,6;CL:0000894,7.23e-18,6;CL:0000806,7.23e-18,6;CL:0000807,7.23e-18,6;CL:0000805,7.23e-18,6;CL:0002425,7.23e-18,6;CL:0002436,7.23e-18,6;CL:0002427,7.23e-18,6;CL:0002428,7.23e-18,6;CL:0002429,7.23e-18,6;CL:0002433,7.23e-18,6;CL:0002431,7.23e-18,6;CL:0002432,7.23e-18,6;CL:0000738,1.42e-16,17;CL:0002087,1.42e-16,17;CL:0000988,1.37e-13,32;CL:0002032,1.37e-13,32;CL:0000037,1.37e-13,32;CL:0000837,1.37e-13,32;CL:0002320,1.18e-08,46;CL:0000134,1.18e-08,46;CL:0000219,5.41e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!5.40e-21!29;UBERON:0002193!1.26e-19!48;UBERON:0002370!2.31e-19!23;UBERON:0000974!2.31e-19!23;UBERON:0004807!2.31e-19!23;UBERON:0005058!2.31e-19!23;UBERON:0003351!2.31e-19!23;UBERON:0009113!2.31e-19!23;UBERON:0003295!2.31e-19!23;UBERON:0009722!2.31e-19!23;UBERON:0005562!2.31e-19!23;UBERON:0007690!2.31e-19!23;UBERON:0002390!2.39e-18!45;UBERON:0003061!2.39e-18!45;UBERON:0006562!3.05e-18!24;UBERON:0003408!3.05e-18!24;UBERON:0001557!3.05e-18!24;UBERON:0001042!3.05e-18!24;UBERON:0008814!3.05e-18!24;UBERON:0009145!3.05e-18!24;UBERON:0000072!2.14e-15!27;UBERON:0002405!2.94e-15!70;UBERON:0000065!4.58e-14!41;UBERON:0005057!7.57e-14!51;UBERON:0001004!1.60e-13!42;UBERON:0003081!5.39e-11!88;UBERON:0000063!2.80e-10!35;UBERON:0005911!7.09e-09!69;UBERON:0002368!9.49e-09!60;UBERON:0002530!3.73e-08!65;UBERON:0003929!3.87e-08!55;UBERON:0001041!2.30e-07!92;UBERON:0000077!4.97e-07!97;UBERON:0000490!9.82e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.28e-46,29;UBERON:0005057,5.28e-46,29;UBERON:0002370,2.07e-44,23;UBERON:0000974,2.07e-44,23;UBERON:0004807,2.07e-44,23;UBERON:0005058,2.07e-44,23;UBERON:0003351,2.07e-44,23;UBERON:0009113,2.07e-44,23;UBERON:0003295,2.07e-44,23;UBERON:0009722,2.07e-44,23;UBERON:0005562,2.07e-44,23;UBERON:0007690,2.07e-44,23;UBERON:0006562,2.15e-42,24;UBERON:0003408,2.15e-42,24;UBERON:0001557,2.15e-42,24;UBERON:0001042,2.15e-42,24;UBERON:0008814,2.15e-42,24;UBERON:0009145,2.15e-42,24;UBERON:0002193,1.03e-37,48;UBERON:0002405,1.03e-37,48;UBERON:0000077,2.32e-37,35;UBERON:0000072,3.04e-37,27;UBERON:0002390,5.18e-37,45;UBERON:0003061,5.18e-37,45;UBERON:0007811,6.19e-27,36;UBERON:0000065,3.68e-23,41;UBERON:0001004,1.63e-22,42;UBERON:0000153,6.76e-22,43;UBERON:0003081,8.57e-17,87;UBERON:0003929,3.06e-16,55;UBERON:0002368,1.49e-14,60;UBERON:0001041,8.12e-14,80;UBERON:0002530,4.00e-13,65;UBERON:0000490,7.28e-13,66;UBERON:0005911,3.95e-12,69;UBERON:0000949,1.86e-11,72;UBERON:0000926,8.30e-11,120;UBERON:0004120,8.30e-11,120;UBERON:0006603,8.30e-11,120;UBERON:0002384,1.18e-08,46;UBERON:0004921,2.41e-08,114;UBERON:0001007,4.01e-08,116;UBERON:0001555,4.01e-08,116;UBERON:0007026,4.01e-08,116;UBERON:0004119,6.57e-08,118;UBERON:0000925,6.57e-08,118;UBERON:0006595,6.57e-08,118|phase1_expression=0,0,0,0,0,0,0,21.950964985068,2.81577444303333,6.08567768437183,2.39705155515707,1.67521533890206,17.1200729931206,20.5437945684644,0.333109761815663,0.809901069559304,0,2.68142840554502,3.42786084014347,2.97072756258621,0.17008658030214,0.198581902401771,0,0.799962113967033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,2.51673909086605,9.42970784614748,10.0828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,11.9111426477699,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0.660837565967596,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0.159454768657487,0.491589944147214,0.345369963731791,0,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,1.53783792718067,0,0.555583582109135,0,1.23024804948923,1.60144721244566,0.339956859987711,0.839708713941948,0.414599921413271,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5884781870117,0.405450430580328,2.46506297195585,1.81889152168913,5.19177417435696,4.17230845040656,5.7693815769585,5.75989155980851,6.96668504642219,6.62999217898499,6.04957110821043,8.08900410139945,8.37043022270866,9.93453668543336,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.50695859978048,0.188626341386076,0.0936415074698824,0,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0,0.436039249896986,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p6@Arhgef1}} | ||
|EntrezGene=16801 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|UniProt=D3YVJ9 | |||
|association_with_transcript=-320bp_to_ENSMUST00000151121_5end | |||
|description=CAGE_peak_6_at_Arhgef1_5end | |||
|id=chr7:25692325..25692345,+ | |||
|ontology_enrichment_celltype=CL:0000838!8.72e-12!12;CL:0000791!1.10e-11!9;CL:0000789!1.10e-11!9;CL:0002420!1.10e-11!9;CL:0002419!1.10e-11!9;CL:0000790!1.10e-11!9;CL:0000084!8.71e-11!11;CL:0000827!8.71e-11!11;CL:0000542!1.33e-10!13;CL:0000051!1.33e-10!13;CL:0000624!1.73e-10!8;CL:0002031!1.64e-09!25;CL:0000988!3.27e-08!32;CL:0002032!3.27e-08!32;CL:0000037!3.27e-08!32;CL:0000566!3.27e-08!32;CL:0000837!3.27e-08!32;CL:0000893!4.61e-08!6;CL:0002489!4.61e-08!6;CL:0000898!4.61e-08!6;CL:0000809!4.61e-08!6;CL:0000810!4.61e-08!6;CL:0000895!4.61e-08!6;CL:0000808!4.61e-08!6;CL:0000894!4.61e-08!6;CL:0000806!4.61e-08!6;CL:0000807!4.61e-08!6;CL:0000805!4.61e-08!6;CL:0002425!4.61e-08!6;CL:0002436!4.61e-08!6;CL:0002427!4.61e-08!6;CL:0002428!4.61e-08!6;CL:0002429!4.61e-08!6;CL:0002433!4.61e-08!6;CL:0002431!4.61e-08!6;CL:0002432!4.61e-08!6;CL:0000738!2.62e-07!17;CL:0002087!2.62e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.71e-27,9;CL:0000789,5.71e-27,9;CL:0002420,5.71e-27,9;CL:0002419,5.71e-27,9;CL:0000790,5.71e-27,9;CL:0000838,2.92e-24,12;CL:0000624,5.94e-24,8;CL:0000542,2.99e-22,13;CL:0000051,2.99e-22,13;CL:0000084,8.83e-22,11;CL:0000827,8.83e-22,11;CL:0002031,3.84e-18,25;CL:0000893,7.23e-18,6;CL:0002489,7.23e-18,6;CL:0000898,7.23e-18,6;CL:0000809,7.23e-18,6;CL:0000810,7.23e-18,6;CL:0000895,7.23e-18,6;CL:0000808,7.23e-18,6;CL:0000894,7.23e-18,6;CL:0000806,7.23e-18,6;CL:0000807,7.23e-18,6;CL:0000805,7.23e-18,6;CL:0002425,7.23e-18,6;CL:0002436,7.23e-18,6;CL:0002427,7.23e-18,6;CL:0002428,7.23e-18,6;CL:0002429,7.23e-18,6;CL:0002433,7.23e-18,6;CL:0002431,7.23e-18,6;CL:0002432,7.23e-18,6;CL:0000738,1.42e-16,17;CL:0002087,1.42e-16,17;CL:0000988,1.37e-13,32;CL:0002032,1.37e-13,32;CL:0000037,1.37e-13,32;CL:0000837,1.37e-13,32;CL:0002320,1.18e-08,46;CL:0000134,1.18e-08,46;CL:0000219,5.41e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.40e-21!29;UBERON:0002193!1.26e-19!48;UBERON:0002370!2.31e-19!23;UBERON:0000974!2.31e-19!23;UBERON:0004807!2.31e-19!23;UBERON:0005058!2.31e-19!23;UBERON:0003351!2.31e-19!23;UBERON:0009113!2.31e-19!23;UBERON:0003295!2.31e-19!23;UBERON:0009722!2.31e-19!23;UBERON:0005562!2.31e-19!23;UBERON:0007690!2.31e-19!23;UBERON:0002390!2.39e-18!45;UBERON:0003061!2.39e-18!45;UBERON:0006562!3.05e-18!24;UBERON:0003408!3.05e-18!24;UBERON:0001557!3.05e-18!24;UBERON:0001042!3.05e-18!24;UBERON:0008814!3.05e-18!24;UBERON:0009145!3.05e-18!24;UBERON:0000072!2.14e-15!27;UBERON:0002405!2.94e-15!70;UBERON:0000065!4.58e-14!41;UBERON:0005057!7.57e-14!51;UBERON:0001004!1.60e-13!42;UBERON:0003081!5.39e-11!88;UBERON:0000063!2.80e-10!35;UBERON:0005911!7.09e-09!69;UBERON:0002368!9.49e-09!60;UBERON:0002530!3.73e-08!65;UBERON:0003929!3.87e-08!55;UBERON:0001041!2.30e-07!92;UBERON:0000077!4.97e-07!97;UBERON:0000490!9.82e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.28e-46,29;UBERON:0005057,5.28e-46,29;UBERON:0002370,2.07e-44,23;UBERON:0000974,2.07e-44,23;UBERON:0004807,2.07e-44,23;UBERON:0005058,2.07e-44,23;UBERON:0003351,2.07e-44,23;UBERON:0009113,2.07e-44,23;UBERON:0003295,2.07e-44,23;UBERON:0009722,2.07e-44,23;UBERON:0005562,2.07e-44,23;UBERON:0007690,2.07e-44,23;UBERON:0006562,2.15e-42,24;UBERON:0003408,2.15e-42,24;UBERON:0001557,2.15e-42,24;UBERON:0001042,2.15e-42,24;UBERON:0008814,2.15e-42,24;UBERON:0009145,2.15e-42,24;UBERON:0002193,1.03e-37,48;UBERON:0002405,1.03e-37,48;UBERON:0000077,2.32e-37,35;UBERON:0000072,3.04e-37,27;UBERON:0002390,5.18e-37,45;UBERON:0003061,5.18e-37,45;UBERON:0007811,6.19e-27,36;UBERON:0000065,3.68e-23,41;UBERON:0001004,1.63e-22,42;UBERON:0000153,6.76e-22,43;UBERON:0003081,8.57e-17,87;UBERON:0003929,3.06e-16,55;UBERON:0002368,1.49e-14,60;UBERON:0001041,8.12e-14,80;UBERON:0002530,4.00e-13,65;UBERON:0000490,7.28e-13,66;UBERON:0005911,3.95e-12,69;UBERON:0000949,1.86e-11,72;UBERON:0000926,8.30e-11,120;UBERON:0004120,8.30e-11,120;UBERON:0006603,8.30e-11,120;UBERON:0002384,1.18e-08,46;UBERON:0004921,2.41e-08,114;UBERON:0001007,4.01e-08,116;UBERON:0001555,4.01e-08,116;UBERON:0007026,4.01e-08,116;UBERON:0004119,6.57e-08,118;UBERON:0000925,6.57e-08,118;UBERON:0006595,6.57e-08,118 | |||
|phase1_expression=0,0,0,0,0,0,0,21.950964985068,2.81577444303333,6.08567768437183,2.39705155515707,1.67521533890206,17.1200729931206,20.5437945684644,0.333109761815663,0.809901069559304,0,2.68142840554502,3.42786084014347,2.97072756258621,0.17008658030214,0.198581902401771,0,0.799962113967033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,2.51673909086605,9.42970784614748,10.0828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,11.9111426477699,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0.660837565967596,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0.159454768657487,0.491589944147214,0.345369963731791,0,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,1.53783792718067,0,0.555583582109135,0,1.23024804948923,1.60144721244566,0.339956859987711,0.839708713941948,0.414599921413271,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5884781870117,0.405450430580328,2.46506297195585,1.81889152168913,5.19177417435696,4.17230845040656,5.7693815769585,5.75989155980851,6.96668504642219,6.62999217898499,6.04957110821043,8.08900410139945,8.37043022270866,9.93453668543336,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.50695859978048,0.188626341386076,0.0936415074698824,0,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0,0.436039249896986,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p6@Arhgef1 | |||
}} |
Revision as of 12:50, 14 September 2013
Short description: | p6@Arhgef1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Arhgef1_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | -320bp_to_ENSMUST00000151121_5end |
EntrezGene: | Arhgef1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.