FFCP PHASE1:Mm9::chr9:55937795..55937814,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19200|HGNC=|MCL_coexpression_id=36|UniProt=P97814|association_with_transcript=12bp_to_ENSMUST00000138646,ENSMUST00000147360,NM_011193,uc009psv.2_5end|description=CAGE_peak_3_at_Pstpip1_5end|id=chr9:55937795..55937814,+|ontology_enrichment_celltype=CL:0000988!3.87e-12!32;CL:0002032!3.87e-12!32;CL:0000037!3.87e-12!32;CL:0000566!3.87e-12!32;CL:0000837!3.87e-12!32;CL:0000738!1.02e-09!17;CL:0002087!1.02e-09!17;CL:0002031!4.91e-09!25;CL:0000542!5.07e-08!13;CL:0000051!5.07e-08!13;CL:0000838!5.47e-08!12;CL:0000084!1.29e-07!11;CL:0000827!1.29e-07!11;CL:0002320!4.32e-07!46;CL:0000134!4.32e-07!46|ontology_enrichment_celltype_v019_2=CL:0000988,1.59e-17,32;CL:0002032,1.59e-17,32;CL:0000037,1.59e-17,32;CL:0000837,1.59e-17,32;CL:0002320,2.18e-13,46;CL:0000134,2.18e-13,46;CL:0000738,2.97e-13,17;CL:0002087,2.97e-13,17;CL:0002031,3.27e-13,25;CL:0000838,6.05e-13,12;CL:0000084,2.77e-12,11;CL:0000827,2.77e-12,11;CL:0000542,1.14e-11,13;CL:0000051,1.14e-11,13;CL:0000791,1.66e-10,9;CL:0000789,1.66e-10,9;CL:0002420,1.66e-10,9;CL:0002419,1.66e-10,9;CL:0000790,1.66e-10,9;CL:0000219,3.82e-10,54;CL:0000624,2.44e-09,8;CL:0000049,1.10e-07,19;CL:0000893,5.13e-07,6;CL:0002489,5.13e-07,6;CL:0000898,5.13e-07,6;CL:0000809,5.13e-07,6;CL:0000810,5.13e-07,6;CL:0000895,5.13e-07,6;CL:0000808,5.13e-07,6;CL:0000894,5.13e-07,6;CL:0000806,5.13e-07,6;CL:0000807,5.13e-07,6;CL:0000805,5.13e-07,6;CL:0002425,5.13e-07,6;CL:0002436,5.13e-07,6;CL:0002427,5.13e-07,6;CL:0002428,5.13e-07,6;CL:0002429,5.13e-07,6;CL:0002433,5.13e-07,6;CL:0002431,5.13e-07,6;CL:0002432,5.13e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.10e-20!48;UBERON:0002390!1.76e-19!45;UBERON:0003061!1.76e-19!45;UBERON:0003081!1.62e-14!88;UBERON:0002405!1.48e-13!70;UBERON:0004177!1.39e-11!29;UBERON:0003408!3.07e-09!24;UBERON:0002370!3.97e-09!23;UBERON:0000974!3.97e-09!23;UBERON:0004807!3.97e-09!23;UBERON:0005058!3.97e-09!23;UBERON:0003351!3.97e-09!23;UBERON:0009113!3.97e-09!23;UBERON:0003295!3.97e-09!23;UBERON:0009722!3.97e-09!23;UBERON:0005562!3.97e-09!23;UBERON:0007690!3.97e-09!23;UBERON:0002371!1.01e-08!16;UBERON:0006562!2.81e-08!24;UBERON:0001557!2.81e-08!24;UBERON:0001042!2.81e-08!24;UBERON:0008814!2.81e-08!24;UBERON:0009145!2.81e-08!24;UBERON:0001474!3.22e-08!22;UBERON:0004765!3.22e-08!22;UBERON:0001434!3.22e-08!22;UBERON:0000072!1.65e-07!27;UBERON:0002204!1.76e-07!32;UBERON:0000926!1.93e-07!193;UBERON:0004120!1.93e-07!193;UBERON:0006603!1.93e-07!193;UBERON:0002384!4.32e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.86e-31,48;UBERON:0002405,3.86e-31,48;UBERON:0002390,1.64e-30,45;UBERON:0003061,1.64e-30,45;UBERON:0004177,1.64e-20,29;UBERON:0005057,1.64e-20,29;UBERON:0000077,6.61e-20,35;UBERON:0003081,8.38e-19,87;UBERON:0002370,3.94e-16,23;UBERON:0000974,3.94e-16,23;UBERON:0004807,3.94e-16,23;UBERON:0005058,3.94e-16,23;UBERON:0003351,3.94e-16,23;UBERON:0009113,3.94e-16,23;UBERON:0003295,3.94e-16,23;UBERON:0009722,3.94e-16,23;UBERON:0005562,3.94e-16,23;UBERON:0007690,3.94e-16,23;UBERON:0006562,3.43e-15,24;UBERON:0003408,3.43e-15,24;UBERON:0001557,3.43e-15,24;UBERON:0001042,3.43e-15,24;UBERON:0008814,3.43e-15,24;UBERON:0009145,3.43e-15,24;UBERON:0000926,6.95e-14,120;UBERON:0004120,6.95e-14,120;UBERON:0006603,6.95e-14,120;UBERON:0002384,2.18e-13,46;UBERON:0000072,8.38e-13,27;UBERON:0002371,2.62e-10,16;UBERON:0001474,3.28e-10,22;UBERON:0004765,3.28e-10,22;UBERON:0001434,3.28e-10,22;UBERON:0002204,4.65e-10,32;UBERON:0000065,1.01e-09,41;UBERON:0001004,2.48e-09,42;UBERON:0007811,3.99e-08,36;UBERON:0001041,1.10e-07,80;UBERON:0000490,2.41e-07,66;UBERON:0003929,9.39e-07,55|phase1_expression=0,0,0,0,0,0,0,19.3684985162364,4.646027831005,7.0219357896598,1.71217968225505,3.27065851880879,17.462474452983,20.8060557757214,0.666219523631325,2.02475267389826,0.699561878128147,7.09789872056035,6.7186072466812,7.21462408056651,0.425216450755349,4.86525660884338,4.70159620450084,0.47997726838022,1.14704640533585,0,0,0,0.570070258369122,1.00812051903972,0.665191531965914,0,0,0,0,0,0,41.016099812217,13.2827008569046,13.088093599345,40.58797267414,51.9114568568419,36.8987868303677,0.125896817975577,0.304130793658544,0,0,0,0.219686182734472,0,0.139986421625363,0,3.02008690903925,13.0565185562042,14.452033363126,0.257259436035947,0,1.03134418455488,0,0,0,0.338844532069132,0,5.39939830368839,6.92206453796882,7.104801149461,2.99600110518405,0.768436610643109,0,0,0,0.285650984403804,0,0,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0,0,0.30559649555362,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0.216491041011214,0.760079596425296,0,0.79928715803342,4.91981978929626,0.593768556259299,0,0.913396434936424,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0.494389935468748,0.289198713839823,9.73071607144862,0.647067399789637,1.98757366614354,2.42437626567611,3.72783522436244,0,0,0.255457055208591,3.35482348616577,3.59941638596045,3.55796635804581,0,0,0,0,0,0,0.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| ||
|EntrezGene=19200 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt=P97814 | |||
|association_with_transcript=12bp_to_ENSMUST00000138646,ENSMUST00000147360,NM_011193,uc009psv.2_5end | |||
|description=CAGE_peak_3_at_Pstpip1_5end | |||
|id=chr9:55937795..55937814,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.87e-12!32;CL:0002032!3.87e-12!32;CL:0000037!3.87e-12!32;CL:0000566!3.87e-12!32;CL:0000837!3.87e-12!32;CL:0000738!1.02e-09!17;CL:0002087!1.02e-09!17;CL:0002031!4.91e-09!25;CL:0000542!5.07e-08!13;CL:0000051!5.07e-08!13;CL:0000838!5.47e-08!12;CL:0000084!1.29e-07!11;CL:0000827!1.29e-07!11;CL:0002320!4.32e-07!46;CL:0000134!4.32e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.59e-17,32;CL:0002032,1.59e-17,32;CL:0000037,1.59e-17,32;CL:0000837,1.59e-17,32;CL:0002320,2.18e-13,46;CL:0000134,2.18e-13,46;CL:0000738,2.97e-13,17;CL:0002087,2.97e-13,17;CL:0002031,3.27e-13,25;CL:0000838,6.05e-13,12;CL:0000084,2.77e-12,11;CL:0000827,2.77e-12,11;CL:0000542,1.14e-11,13;CL:0000051,1.14e-11,13;CL:0000791,1.66e-10,9;CL:0000789,1.66e-10,9;CL:0002420,1.66e-10,9;CL:0002419,1.66e-10,9;CL:0000790,1.66e-10,9;CL:0000219,3.82e-10,54;CL:0000624,2.44e-09,8;CL:0000049,1.10e-07,19;CL:0000893,5.13e-07,6;CL:0002489,5.13e-07,6;CL:0000898,5.13e-07,6;CL:0000809,5.13e-07,6;CL:0000810,5.13e-07,6;CL:0000895,5.13e-07,6;CL:0000808,5.13e-07,6;CL:0000894,5.13e-07,6;CL:0000806,5.13e-07,6;CL:0000807,5.13e-07,6;CL:0000805,5.13e-07,6;CL:0002425,5.13e-07,6;CL:0002436,5.13e-07,6;CL:0002427,5.13e-07,6;CL:0002428,5.13e-07,6;CL:0002429,5.13e-07,6;CL:0002433,5.13e-07,6;CL:0002431,5.13e-07,6;CL:0002432,5.13e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.10e-20!48;UBERON:0002390!1.76e-19!45;UBERON:0003061!1.76e-19!45;UBERON:0003081!1.62e-14!88;UBERON:0002405!1.48e-13!70;UBERON:0004177!1.39e-11!29;UBERON:0003408!3.07e-09!24;UBERON:0002370!3.97e-09!23;UBERON:0000974!3.97e-09!23;UBERON:0004807!3.97e-09!23;UBERON:0005058!3.97e-09!23;UBERON:0003351!3.97e-09!23;UBERON:0009113!3.97e-09!23;UBERON:0003295!3.97e-09!23;UBERON:0009722!3.97e-09!23;UBERON:0005562!3.97e-09!23;UBERON:0007690!3.97e-09!23;UBERON:0002371!1.01e-08!16;UBERON:0006562!2.81e-08!24;UBERON:0001557!2.81e-08!24;UBERON:0001042!2.81e-08!24;UBERON:0008814!2.81e-08!24;UBERON:0009145!2.81e-08!24;UBERON:0001474!3.22e-08!22;UBERON:0004765!3.22e-08!22;UBERON:0001434!3.22e-08!22;UBERON:0000072!1.65e-07!27;UBERON:0002204!1.76e-07!32;UBERON:0000926!1.93e-07!193;UBERON:0004120!1.93e-07!193;UBERON:0006603!1.93e-07!193;UBERON:0002384!4.32e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.86e-31,48;UBERON:0002405,3.86e-31,48;UBERON:0002390,1.64e-30,45;UBERON:0003061,1.64e-30,45;UBERON:0004177,1.64e-20,29;UBERON:0005057,1.64e-20,29;UBERON:0000077,6.61e-20,35;UBERON:0003081,8.38e-19,87;UBERON:0002370,3.94e-16,23;UBERON:0000974,3.94e-16,23;UBERON:0004807,3.94e-16,23;UBERON:0005058,3.94e-16,23;UBERON:0003351,3.94e-16,23;UBERON:0009113,3.94e-16,23;UBERON:0003295,3.94e-16,23;UBERON:0009722,3.94e-16,23;UBERON:0005562,3.94e-16,23;UBERON:0007690,3.94e-16,23;UBERON:0006562,3.43e-15,24;UBERON:0003408,3.43e-15,24;UBERON:0001557,3.43e-15,24;UBERON:0001042,3.43e-15,24;UBERON:0008814,3.43e-15,24;UBERON:0009145,3.43e-15,24;UBERON:0000926,6.95e-14,120;UBERON:0004120,6.95e-14,120;UBERON:0006603,6.95e-14,120;UBERON:0002384,2.18e-13,46;UBERON:0000072,8.38e-13,27;UBERON:0002371,2.62e-10,16;UBERON:0001474,3.28e-10,22;UBERON:0004765,3.28e-10,22;UBERON:0001434,3.28e-10,22;UBERON:0002204,4.65e-10,32;UBERON:0000065,1.01e-09,41;UBERON:0001004,2.48e-09,42;UBERON:0007811,3.99e-08,36;UBERON:0001041,1.10e-07,80;UBERON:0000490,2.41e-07,66;UBERON:0003929,9.39e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,19.3684985162364,4.646027831005,7.0219357896598,1.71217968225505,3.27065851880879,17.462474452983,20.8060557757214,0.666219523631325,2.02475267389826,0.699561878128147,7.09789872056035,6.7186072466812,7.21462408056651,0.425216450755349,4.86525660884338,4.70159620450084,0.47997726838022,1.14704640533585,0,0,0,0.570070258369122,1.00812051903972,0.665191531965914,0,0,0,0,0,0,41.016099812217,13.2827008569046,13.088093599345,40.58797267414,51.9114568568419,36.8987868303677,0.125896817975577,0.304130793658544,0,0,0,0.219686182734472,0,0.139986421625363,0,3.02008690903925,13.0565185562042,14.452033363126,0.257259436035947,0,1.03134418455488,0,0,0,0.338844532069132,0,5.39939830368839,6.92206453796882,7.104801149461,2.99600110518405,0.768436610643109,0,0,0,0.285650984403804,0,0,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0,0,0.30559649555362,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0.216491041011214,0.760079596425296,0,0.79928715803342,4.91981978929626,0.593768556259299,0,0.913396434936424,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0.494389935468748,0.289198713839823,9.73071607144862,0.647067399789637,1.98757366614354,2.42437626567611,3.72783522436244,0,0,0.255457055208591,3.35482348616577,3.59941638596045,3.55796635804581,0,0,0,0,0,0,0.486723789203273,0.305518091550949,3.4833951770826,1.51633655060205,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0.189106080167819,0.175951124163949,0.657587197282725,0,0,1.85203922767149,0.199034266818493,10.5331978096985,4.37491442095016,6.81992398549422,0.207125772535502,0.469052119962192,0,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.32833492815819,0.324275238183423,0,0.439100230582101,0.134206418760372,0.210289948564127,0,1.98251269790279,0.264450566663544,0.639864751605702,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,0.380451252225118,0.949058123089023,0,1.00534083520108,0.596869416123452,0.779856348476481,0.898819408654221,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0,0,0,0,0.442830443938806,0.31399745568275,0,0,0.166845105716094,1.17935397067922,0,1.42002084971952,1.4470629585145,1.78238096246994,0.287696137450811,1.45921704097532,1.37280706594041,0,0.744281895337007,0,0.252578877947112,0.179397413521912,0,3.32555742299888,0.189491411770485,0,0,0,0,0.476087281772027,0.585400943573396,0.315270288212382,0,1.2756381492599,1.3109065177259,1.72684981865896,0.867894351489069,4.52373851817817,16.3171705145613,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0.283880170416537,0.178065603667255,0,0.659880491890142,0,0,0.302323556964751,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0.632073515871632,0,0,0.340439605753788,0,0.258717367565509,0,0,0,0.164549020602121,0,4.69343416127421,2.96564899209348,0.661585194164886,0.49465875882444,0.322928853391811,0.361877549568935,0.477489376012546,0.492422699235184,0.291480836629851,0,5.29699730473343,1.44470807574256,3.51869602002452,3.20226376907975,1.91371918809435,2.97411625168479,3.73952545986482,3.21888340344413,3.73139929271944,0.954670618015114,0.158167996790568,0.203319467126849,0.324016022465404,0,0.218362563746178,0.269728692769641,0.330613822901344,0.523511883968059,0,0.621339313086926,0,0,0,0,0,0.337912250981556,0.234714477291508,0.39061315453185,0,0.241584120826006,0,20.5407228408316,0.405450430580328,3.59488350076895,4.93699127315621,4.47566739168704,6.75516606256301,10.0964177596774,11.2244040652679,8.17828244579996,12.80274351804,14.4181444745682,16.3729239642784,13.9507170378478,19.2846888599589,0,0,0,0.503653849092235,0.579568782096571,3.19060208267009,0.549454872801795,1.07184189539533,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.419226325255965,0.183843508450014,0,0.206035057238894,0.64183841918363,0.252697211763798,0.50695859978048,0.377252682772152,0.187283014939765,0.0640251524048693,0.114870937911227,0,0,0.38581844092741,0.412085900803307,0,0,0.532427418478012,0,0.726732083161643,0.282328141245992,0.338458431566706,0.73171189149109,0,0.679020569229309,0,0.711810108745045,0.394017929502254,0.818462086339379,0.154936841185966,0.578719832943424,0,2.10538447600868,0.859484216193193,0.191288332068843,0.661774257358546,0.231867835620421 | |||
|short_description=p3@Pstpip1 | |||
}} |
Revision as of 18:16, 14 September 2013
Short description: | p3@Pstpip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pstpip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 12bp_to_ENSMUST00000138646, ENSMUST00000147360, NM_011193, uc009psv.2_5end |
EntrezGene: | Pstpip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.