FFCP PHASE1:Mm9::chrX:155897065..155897097,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=78283|HGNC=|MCL_coexpression_id=1878|UniProt=Q8C0A6,A2AG50|association_with_transcript=0bp_to_ENSMUST00000087141,ENSMUST00000156172,uc009usp.1,uc009usq.1_5end|description=CAGE_peak_3_at_Mtap7d2_5end|id=chrX:155897065..155897097,+|ontology_enrichment_celltype=CL:0000221!6.61e-11!44;CL:0000133!6.61e-11!44;CL:0002319!1.77e-10!43;CL:0000540!7.00e-10!33;CL:0000047!7.00e-10!33;CL:0000031!7.00e-10!33;CL:0000404!7.00e-10!33;CL:0000055!2.50e-09!50;CL:0000393!4.45e-09!39;CL:0000211!4.45e-09!39;CL:0000117!9.72e-07!23;CL:0000337!9.72e-07!23|ontology_enrichment_celltype_v019_2=CL:0000540,1.08e-08,33;CL:0000047,1.08e-08,33;CL:0000031,1.08e-08,33;CL:0000404,1.08e-08,33;CL:0002319,3.88e-08,43;CL:0000393,6.42e-08,39;CL:0000211,6.42e-08,39;CL:0000221,7.30e-08,44;CL:0000133,7.30e-08,44;CL:0000117,4.71e-07,23;CL:0000337,4.71e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!9.79e-22!75;UBERON:0001016!9.79e-22!75;UBERON:0004121!1.29e-21!102;UBERON:0000924!1.29e-21!102;UBERON:0006601!1.29e-21!102;UBERON:0001017!6.48e-21!73;UBERON:0005743!6.48e-21!73;UBERON:0002346!6.55e-19!71;UBERON:0003075!6.55e-19!71;UBERON:0007284!6.55e-19!71;UBERON:0000033!2.96e-17!63;UBERON:0000955!2.31e-14!50;UBERON:0006238!2.31e-14!50;UBERON:0001049!3.09e-14!52;UBERON:0005068!3.09e-14!52;UBERON:0006241!3.09e-14!52;UBERON:0007135!3.09e-14!52;UBERON:0002616!1.04e-13!49;UBERON:0003056!2.41e-11!49;UBERON:0003080!1.83e-09!40;UBERON:0002780!7.14e-09!39;UBERON:0001890!7.14e-09!39;UBERON:0006240!7.14e-09!39;UBERON:0007811!3.70e-08!86;UBERON:0004111!2.14e-07!122;UBERON:0000025!6.86e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.23e-24,75;UBERON:0001017,1.04e-23,73;UBERON:0004121,3.31e-20,95;UBERON:0000924,3.31e-20,95;UBERON:0006601,3.31e-20,95;UBERON:0002346,2.35e-19,64;UBERON:0003075,2.35e-19,64;UBERON:0007284,2.35e-19,64;UBERON:0000073,4.52e-19,54;UBERON:0000955,1.29e-17,47;UBERON:0006238,1.29e-17,47;UBERON:0010371,1.79e-17,73;UBERON:0001049,8.72e-17,52;UBERON:0005068,8.72e-17,52;UBERON:0006241,8.72e-17,52;UBERON:0007135,8.72e-17,52;UBERON:0002616,2.78e-16,46;UBERON:0010314,1.89e-15,92;UBERON:0003080,1.99e-12,40;UBERON:0003056,9.23e-12,49;UBERON:0002780,3.22e-11,39;UBERON:0001890,3.22e-11,39;UBERON:0006240,3.22e-11,39;UBERON:0001894,3.75e-09,10;UBERON:0006222,3.75e-09,10;UBERON:0002950,3.79e-08,4;UBERON:0001891,3.79e-08,4;UBERON:0009616,3.79e-08,4;UBERON:0010286,3.79e-08,4;UBERON:0004111,2.95e-07,122;UBERON:0007023,4.28e-07,51;UBERON:0000025,8.42e-07,114|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,2.34717403304412,0.218025156380447,0.219686182734472,0.777719596297134,0.699932108126813,0,0,0,0,1.28629718017973,0.286533439938757,0.515672092277442,1.01158230429799,0.528990979272033,1.26766280701236,0,0,0,0,0.7104801149461,0,0.384218305321555,0.933206510776299,1.21505344498522,1.05162480675691,0.571301968807607,1.10434270475807,0.122490799214954,0,0,2.20231761998777,1.78762273319263,3.5329502648936,0.923204014111357,0.548925861614458,0,4.4669279840221,1.12552522006336,2.29197371665215,0.589257170947335,0.996601765593721,0.372798891650601,0.302904773332736,3.77857800533928,0.579728977403356,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0.985903938436763,0,0,0,0.216491041011214,0,0,0.11418387971906,0,1.33597925158342,0.346970653532272,0,0.230615497256059,0.301445281105245,0.823120949949934,0.753999547978053,0.247194967734374,1.3013942122792,0,0.161766849947409,0,0,0,0.585561594023094,1.04723353406728,0.510914110417183,0,0,0,4.6435098215495,2.28750301409313,0.251308704225729,1.73824320192276,2.30143911597297,4.77912502486988,2.75810147215188,0.407357455401265,0.870848794270651,3.0326731012041,0,1.43132487258974,0.229902104433473,0.900310649026746,0.452114453507145,0.816437989815934,0.768682321709099,0.468508622798644,2.06962696591213,0,0.189106080167819,0,0,0.834141747676794,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.154267112887378,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0.492502392237286,0.810688095458557,1.02339991197733,0.439100230582101,0.671032093801859,2.3131894342054,0.720332286654991,0,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.252946148497029,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0,0,0.488894929326078,0,0.704070744865506,0.670025029767263,0,0,0.315270288212382,0,0,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0,0,8.83028244932856,10.3146284201139,0,0.252470927204373,1.26203287766503,1.56175497718655,2.15423397732799,0.238968797952552,0.668396022247182,0.283076530788832,0.809621403349789,0.292255857911312,0.790575555893047,3.85585579706168,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0.632073515871632,0,0,9.87274856685985,0.36012218806262,0.258717367565509,0.643011105094777,1.77340233642274,3.74574516964348,3.1264313914403,1.8267896946876,13.3762873596315,1.48282449604674,1.10264199027481,0,0.161464426695906,0,0,0,0.291480836629851,12.9797711407357,0,0,0.185194527369712,0,0,0.228778173206523,0.169978429993855,0,0,0,0,0.203319467126849,0.216010681643603,0.418176592028937,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0,0,0,0,0.405450430580328,0,0,0,0,0.360586348559907,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,0.906921534460845,0,0.0897138566094757,0,0.19318959403219,15.5776454624481,0.183151624267265,0,0,0.564751842617067,1.84130094602871,1.14579102687879,0.68741272937475,0,0,0,0.900642406448441,0,1.03552062350364,1.24544817101012,0.798049746802062,0.682934423016537,0.486213434136588,0.209613162627982,0.183843508450014,0.888986911206461,0,0.962757628775446,0.252697211763798,0,0,0.561849044819294,0.512201219238954,0.287177344778066,0.476293691283074,0.231768651889711,0,0.412085900803307,0.588795680537589,0.685738504770831,0,0,0.581385666529314,0.376437521661322,0.338458431566706,0.182927972872773,0,0.543216455383447,1.12228454331548,0.355905054372522,0.29551344712669,0.409231043169689,0.929621047115796,0.385813221962283,0.749431733813838,0.233931608445408,0.429742108096597,0.382576664137687,0.661774257358546,0.695603506861264|short_description=p3@Mtap7d2}} | ||
|EntrezGene=78283 | |||
|HGNC= | |||
|MCL_coexpression_id=1878 | |||
|UniProt=Q8C0A6,A2AG50 | |||
|association_with_transcript=0bp_to_ENSMUST00000087141,ENSMUST00000156172,uc009usp.1,uc009usq.1_5end | |||
|description=CAGE_peak_3_at_Mtap7d2_5end | |||
|id=chrX:155897065..155897097,+ | |||
|ontology_enrichment_celltype=CL:0000221!6.61e-11!44;CL:0000133!6.61e-11!44;CL:0002319!1.77e-10!43;CL:0000540!7.00e-10!33;CL:0000047!7.00e-10!33;CL:0000031!7.00e-10!33;CL:0000404!7.00e-10!33;CL:0000055!2.50e-09!50;CL:0000393!4.45e-09!39;CL:0000211!4.45e-09!39;CL:0000117!9.72e-07!23;CL:0000337!9.72e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.08e-08,33;CL:0000047,1.08e-08,33;CL:0000031,1.08e-08,33;CL:0000404,1.08e-08,33;CL:0002319,3.88e-08,43;CL:0000393,6.42e-08,39;CL:0000211,6.42e-08,39;CL:0000221,7.30e-08,44;CL:0000133,7.30e-08,44;CL:0000117,4.71e-07,23;CL:0000337,4.71e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.79e-22!75;UBERON:0001016!9.79e-22!75;UBERON:0004121!1.29e-21!102;UBERON:0000924!1.29e-21!102;UBERON:0006601!1.29e-21!102;UBERON:0001017!6.48e-21!73;UBERON:0005743!6.48e-21!73;UBERON:0002346!6.55e-19!71;UBERON:0003075!6.55e-19!71;UBERON:0007284!6.55e-19!71;UBERON:0000033!2.96e-17!63;UBERON:0000955!2.31e-14!50;UBERON:0006238!2.31e-14!50;UBERON:0001049!3.09e-14!52;UBERON:0005068!3.09e-14!52;UBERON:0006241!3.09e-14!52;UBERON:0007135!3.09e-14!52;UBERON:0002616!1.04e-13!49;UBERON:0003056!2.41e-11!49;UBERON:0003080!1.83e-09!40;UBERON:0002780!7.14e-09!39;UBERON:0001890!7.14e-09!39;UBERON:0006240!7.14e-09!39;UBERON:0007811!3.70e-08!86;UBERON:0004111!2.14e-07!122;UBERON:0000025!6.86e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.23e-24,75;UBERON:0001017,1.04e-23,73;UBERON:0004121,3.31e-20,95;UBERON:0000924,3.31e-20,95;UBERON:0006601,3.31e-20,95;UBERON:0002346,2.35e-19,64;UBERON:0003075,2.35e-19,64;UBERON:0007284,2.35e-19,64;UBERON:0000073,4.52e-19,54;UBERON:0000955,1.29e-17,47;UBERON:0006238,1.29e-17,47;UBERON:0010371,1.79e-17,73;UBERON:0001049,8.72e-17,52;UBERON:0005068,8.72e-17,52;UBERON:0006241,8.72e-17,52;UBERON:0007135,8.72e-17,52;UBERON:0002616,2.78e-16,46;UBERON:0010314,1.89e-15,92;UBERON:0003080,1.99e-12,40;UBERON:0003056,9.23e-12,49;UBERON:0002780,3.22e-11,39;UBERON:0001890,3.22e-11,39;UBERON:0006240,3.22e-11,39;UBERON:0001894,3.75e-09,10;UBERON:0006222,3.75e-09,10;UBERON:0002950,3.79e-08,4;UBERON:0001891,3.79e-08,4;UBERON:0009616,3.79e-08,4;UBERON:0010286,3.79e-08,4;UBERON:0004111,2.95e-07,122;UBERON:0007023,4.28e-07,51;UBERON:0000025,8.42e-07,114 | |||
|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,2.34717403304412,0.218025156380447,0.219686182734472,0.777719596297134,0.699932108126813,0,0,0,0,1.28629718017973,0.286533439938757,0.515672092277442,1.01158230429799,0.528990979272033,1.26766280701236,0,0,0,0,0.7104801149461,0,0.384218305321555,0.933206510776299,1.21505344498522,1.05162480675691,0.571301968807607,1.10434270475807,0.122490799214954,0,0,2.20231761998777,1.78762273319263,3.5329502648936,0.923204014111357,0.548925861614458,0,4.4669279840221,1.12552522006336,2.29197371665215,0.589257170947335,0.996601765593721,0.372798891650601,0.302904773332736,3.77857800533928,0.579728977403356,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0.985903938436763,0,0,0,0.216491041011214,0,0,0.11418387971906,0,1.33597925158342,0.346970653532272,0,0.230615497256059,0.301445281105245,0.823120949949934,0.753999547978053,0.247194967734374,1.3013942122792,0,0.161766849947409,0,0,0,0.585561594023094,1.04723353406728,0.510914110417183,0,0,0,4.6435098215495,2.28750301409313,0.251308704225729,1.73824320192276,2.30143911597297,4.77912502486988,2.75810147215188,0.407357455401265,0.870848794270651,3.0326731012041,0,1.43132487258974,0.229902104433473,0.900310649026746,0.452114453507145,0.816437989815934,0.768682321709099,0.468508622798644,2.06962696591213,0,0.189106080167819,0,0,0.834141747676794,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.154267112887378,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0.492502392237286,0.810688095458557,1.02339991197733,0.439100230582101,0.671032093801859,2.3131894342054,0.720332286654991,0,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.252946148497029,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0,0,0.488894929326078,0,0.704070744865506,0.670025029767263,0,0,0.315270288212382,0,0,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0,0,8.83028244932856,10.3146284201139,0,0.252470927204373,1.26203287766503,1.56175497718655,2.15423397732799,0.238968797952552,0.668396022247182,0.283076530788832,0.809621403349789,0.292255857911312,0.790575555893047,3.85585579706168,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0.632073515871632,0,0,9.87274856685985,0.36012218806262,0.258717367565509,0.643011105094777,1.77340233642274,3.74574516964348,3.1264313914403,1.8267896946876,13.3762873596315,1.48282449604674,1.10264199027481,0,0.161464426695906,0,0,0,0.291480836629851,12.9797711407357,0,0,0.185194527369712,0,0,0.228778173206523,0.169978429993855,0,0,0,0,0.203319467126849,0.216010681643603,0.418176592028937,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0,0,0,0,0.405450430580328,0,0,0,0,0.360586348559907,0,0.100966449948148,0,0,0.0974578807397524,0,0.116876902181569,0.906921534460845,0,0.0897138566094757,0,0.19318959403219,15.5776454624481,0.183151624267265,0,0,0.564751842617067,1.84130094602871,1.14579102687879,0.68741272937475,0,0,0,0.900642406448441,0,1.03552062350364,1.24544817101012,0.798049746802062,0.682934423016537,0.486213434136588,0.209613162627982,0.183843508450014,0.888986911206461,0,0.962757628775446,0.252697211763798,0,0,0.561849044819294,0.512201219238954,0.287177344778066,0.476293691283074,0.231768651889711,0,0.412085900803307,0.588795680537589,0.685738504770831,0,0,0.581385666529314,0.376437521661322,0.338458431566706,0.182927972872773,0,0.543216455383447,1.12228454331548,0.355905054372522,0.29551344712669,0.409231043169689,0.929621047115796,0.385813221962283,0.749431733813838,0.233931608445408,0.429742108096597,0.382576664137687,0.661774257358546,0.695603506861264 | |||
|short_description=p3@Mtap7d2 | |||
}} |
Revision as of 19:34, 14 September 2013
Short description: | p3@Mtap7d2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mtap7d2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1878 |
Association with transcript: | 0bp_to_ENSMUST00000087141, ENSMUST00000156172, uc009usp.1, uc009usq.1_5end |
EntrezGene: | Mtap7d2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.08e-08 | 33 |
neuronal stem cell | 1.08e-08 | 33 |
neuroblast | 1.08e-08 | 33 |
electrically signaling cell | 1.08e-08 | 33 |
neural cell | 3.88e-08 | 43 |
electrically responsive cell | 6.42e-08 | 39 |
electrically active cell | 6.42e-08 | 39 |
ectodermal cell | 7.30e-08 | 44 |
neurectodermal cell | 7.30e-08 | 44 |
CNS neuron (sensu Vertebrata) | 4.71e-07 | 23 |
neuroblast (sensu Vertebrata) | 4.71e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.23e-24 | 75 |
central nervous system | 1.04e-23 | 73 |
ectoderm-derived structure | 3.31e-20 | 95 |
ectoderm | 3.31e-20 | 95 |
presumptive ectoderm | 3.31e-20 | 95 |
neurectoderm | 2.35e-19 | 64 |
neural plate | 2.35e-19 | 64 |
presumptive neural plate | 2.35e-19 | 64 |
regional part of nervous system | 4.52e-19 | 54 |
brain | 1.29e-17 | 47 |
future brain | 1.29e-17 | 47 |
ecto-epithelium | 1.79e-17 | 73 |
neural tube | 8.72e-17 | 52 |
neural rod | 8.72e-17 | 52 |
future spinal cord | 8.72e-17 | 52 |
neural keel | 8.72e-17 | 52 |
regional part of brain | 2.78e-16 | 46 |
structure with developmental contribution from neural crest | 1.89e-15 | 92 |
anterior neural tube | 1.99e-12 | 40 |
pre-chordal neural plate | 9.23e-12 | 49 |
regional part of forebrain | 3.22e-11 | 39 |
forebrain | 3.22e-11 | 39 |
future forebrain | 3.22e-11 | 39 |
diencephalon | 3.75e-09 | 10 |
future diencephalon | 3.75e-09 | 10 |
regional part of midbrain | 3.79e-08 | 4 |
midbrain | 3.79e-08 | 4 |
presumptive midbrain | 3.79e-08 | 4 |
midbrain neural tube | 3.79e-08 | 4 |
anatomical conduit | 2.95e-07 | 122 |
adult organism | 4.28e-07 | 51 |
tube | 8.42e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.