FFCP PHASE1:Hg19::chr11:72853171..72853188,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9873 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29114 | |||
|TSSclassifier=strong | |||
|UniProt=O94868 | |||
|association_with_transcript=-28bp_to_NM_014824,uc001oth.3,uc009ytl.2,uc010rrg.1_5end | |||
|description=CAGE_peak_6_at_FCHSD2_5end | |||
|id=chr11:72853171..72853188,- | |||
|ontology_enrichment_celltype=CL:0000542!6.89e-14!53;CL:0000051!6.89e-14!53;CL:0000838!1.68e-13!52;CL:0000738!7.34e-10!140;CL:0000037!2.51e-09!172;CL:0000566!2.51e-09!172;CL:0000988!1.64e-08!182;CL:0000236!5.05e-08!14;CL:0002087!5.34e-08!119;CL:0000945!1.10e-07!24;CL:0000826!1.10e-07!24;CL:0002031!1.44e-07!124;CL:0002032!1.48e-07!165;CL:0000837!1.48e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.28e-12;18!CL:0000789;6.28e-12;18!CL:0002419;6.28e-12;18!CL:0000542;1.06e-10;53!CL:0000084;1.96e-10;25!CL:0000236;2.49e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.68e-17,53;CL:0000051,1.68e-17,53;CL:0000838,6.97e-17,52;CL:0000738,7.17e-15,136;CL:0000037,2.98e-13,168;CL:0002087,4.78e-12,115;CL:0000988,5.30e-12,177;CL:0000791,3.59e-11,18;CL:0000789,3.59e-11,18;CL:0002420,3.59e-11,18;CL:0002419,3.59e-11,18;CL:0000790,3.59e-11,18;CL:0000236,4.92e-11,14;CL:0002032,2.17e-10,161;CL:0000837,2.17e-10,161;CL:0002031,2.29e-10,120;CL:0000084,1.55e-09,25;CL:0000827,1.55e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000790;6.28e-12;18!CL:0000051;1.06e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.19e-18!115;UBERON:0001049!9.91e-14!57;UBERON:0005068!9.91e-14!57;UBERON:0006241!9.91e-14!57;UBERON:0007135!9.91e-14!57;UBERON:0003080!4.61e-12!42;UBERON:0002780!5.08e-12!41;UBERON:0001890!5.08e-12!41;UBERON:0006240!5.08e-12!41;UBERON:0002616!8.90e-12!59;UBERON:0002020!3.65e-11!34;UBERON:0003528!3.65e-11!34;UBERON:0000955!3.93e-11!69;UBERON:0006238!3.93e-11!69;UBERON:0001893!5.54e-11!34;UBERON:0002791!9.31e-11!33;UBERON:0001017!9.93e-11!82;UBERON:0001869!1.36e-10!32;UBERON:0000073!2.33e-10!94;UBERON:0001016!2.33e-10!94;UBERON:0005743!3.89e-10!86;UBERON:0002619!1.24e-09!22;UBERON:0001950!5.85e-09!20;UBERON:0000956!7.17e-09!25;UBERON:0000203!7.17e-09!25;UBERON:0003075!5.77e-07!86;UBERON:0007284!5.77e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.03e-10;22!UBERON:0001950;3.68e-10;20!UBERON:0001869;4.97e-09;32!UBERON:0000956;1.41e-08;25!UBERON:0000203;1.41e-08;25!UBERON:0001893;1.90e-08;34!UBERON:0002780;2.20e-08;41!UBERON:0001890;2.20e-08;41!UBERON:0003528;2.42e-08;34!UBERON:0002020;2.42e-08;34!UBERON:0002791;2.91e-08;32!UBERON:0000073;5.16e-08;53!UBERON:0002616;5.16e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.58e-19,114;UBERON:0001049,3.81e-14,56;UBERON:0005068,3.81e-14,56;UBERON:0006241,3.81e-14,56;UBERON:0007135,3.81e-14,56;UBERON:0000073,2.14e-13,53;UBERON:0002616,2.14e-13,53;UBERON:0002780,1.06e-10,41;UBERON:0001890,1.06e-10,41;UBERON:0003080,1.06e-10,41;UBERON:0006240,1.06e-10,41;UBERON:0002619,2.90e-10,22;UBERON:0003528,4.55e-10,34;UBERON:0002020,4.55e-10,34;UBERON:0001950,5.20e-10,20;UBERON:0001893,7.63e-10,34;UBERON:0001869,8.63e-10,32;UBERON:0000955,2.37e-09,68;UBERON:0006238,2.37e-09,68;UBERON:0002791,6.13e-09,32;UBERON:0001017,1.06e-08,81;UBERON:0001016,1.60e-08,89;UBERON:0000956,1.88e-08,25;UBERON:0000203,1.88e-08,25;UBERON:0003075,3.62e-08,82;UBERON:0007284,3.62e-08,82;UBERON:0002346,2.59e-07,86 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0.527533956456907,0.37129905888014,0,0,0,0,0,0.369363174230364,0.612002073732759,0,0.286235987131057,0.410623275218653,0.753255837568817,0.993374274723366,0.821005894499457,1.49550484495991,0.393364276848904,0.383829398097213,1.08371286321253,0,0.6024118375565,0,0.46480320348181,0.710846162437108,1.17440175733939,2.21598163412751,2.20598892217156,1.95309783644267,2.46307021663917,0.971680998056939,1.54545340580512,0.726991193897824,0,0.242584061187816,0.232429036905685,0.411167888021826,1.23882548358041,0.575384784644301,0.768482119587302,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,1.27867425159808,0.329851300186716,0.199463657621632,0,0,0.56738522469114,0,0.502497330513487,0,0,0,1.47311054395026,0.316462387440884,0.211255286311942,1.06302149982522,0.419317291016752,1.23561494261145,0.300353785683013,1.12507910687956,0.855038231223746,0.19891667719909,0.547992461293902,3.51992488922645,8.19207916893197,3.55803701545422,2.98711155796555,5.60554381850417,2.87376219977242,3.30522436392431,1.90810750907073,5.69212969109448,2.34894875748376,3.05818582500183,1.32171328579026,0.560508562981536,1.31692042387539,3.14735632182133,3.14408610199332,1.02800749499755,1.5046784585161,2.28145586643513,2.8406868344084,1.94826728407911,0.445641827540694,2.3568472597987,3.54454231333794,3.79125409271022,1.0247305578054,1.56071217071854,1.64437904603676,1.65810010671509,1.44901542867526,2.07601188426885,2.1403266247177,3.1360657141493,1.58633079776593,1.91610246800961,1.71813722741315,0.759059076058509,2.22995790026868,1.30216690771284,0,2.86092726247768,1.15187950038977,2.49861453104692,1.18388626022008,0,2.21767417547206,1.06976078313403,2.75166367377318,0,0,0.12786256184353,0.361439152384566,1.00267582127178,0.579386075843295,0.795285947051099,0.486634870302636,0.283604451492204,0.221729397462564,0.175669571386252,1.30979075497713,0,0.370784442784429,0.649094787309367,0.870648686496336,1.46253756570752,4.29283123749616,2.28797964312051,3.71457501329565,0.198762407366705,0,0.347140501607594,0,1.25849830862972,0.550236083880135,0.208994966536811,0.258416759169329,0,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0.714397826272638,0,0.225222960966644,0,0,0.183201743930407,2.63560834872127,0,0.436094052142534,0.496971951695318,0.12663051166458,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0,0.404132016209064,0.163461903113459,0.302714855289863,0.576175924479999,0,0.624320153660641,0,0.149448680551801,0.352303495931295,0.161872944368132,0.702254033511242,0,0.245668634623536,0.619954687054593,0,1.23633464639278,0,0.718618141816238,0.168336113954066,0.500474079487857,0.831192346452549,0.438977620880838,0,0.751190294532984,0.226864366320042,0.179389635688862,0.85422955527427,0.211931901159562,0.300091096084402,0.309157587715317,0,0,0.506328996723799,0.389748020644795,0,0.276149695926898,0.646584227275248,0,0.201504196455281,0.508681776931463,0,0.272746120590835,0,0,0,0.232387885739037,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.330881918197182,0.435758888184812,0.474541238222193,0.269662616320329,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0.171567810298526,0.329250856225877,0,0.402115889646523,0.370353780634118,0.325808305310325,0,0,0.695582429850461,0,0.288732895522148,0.925971025153221,0,0.790204397959275,0,3.44703808522356,0.468008530278475,1.93220510975347,0,0.16798212819886,0.141775097242386,0,0.581267877027924,0,0.985326475791887,0.44024217006613,1.4512968087854,1.72943944100354,2.65109110195398,0.126995788584338,0,1.17217447210047,0,0.102827492703324,0,0.285826432630578,0,0.87192013766656,0.36669142910475,0.387815147273333,0,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,0,0,0.823240336780769,0,0.355391948742546,0,0.301439377059586,0,0.499864955910285,0,2.51128545716063,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0.821905290201534,0.179060963239896,1.00876629594175,2.75843064282698,2.15627574859517,2.18183161675572,0.76228387266739,0,0.773288812777695,0.167516265334349,0.637938751653163,3.74503511973591,0,1.24324654030811,0.736148950314839,0.500170521059677,0.542530047399471,0.831883446123229,0.356857977594324,0.946214490203608,0.819989904948992,0.601892199455438,2.27407504055985,0,0,0.368738337083406,0.60818530127658,0.195801157462741,0.686286847621712,1.86091223510599,1.07857100409308,2.56146138728266,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0.64341568457443,0,0,0.177561725313127,0.410635780069046,0,0.697262270759755,0,0.200506470303285,0.184161977871793,0.229628896329213,0,0.524497659837696,0.451199612907412,0.385076685522074,0,0,0.211103257785751,0,0.340187410553031,0.431831832204279,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0.877039506583738,0.261435451024901,0.256450125116389,0,0.325378394664303,0.721287081534056,0.366277859273374,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0.308097234229289,0.460511024178389,0.689182862422653,0.429680979473094,0.725083469571143,0.511359764496605,0.178064071293475,0,0.192190067365106,0.510450849978337,0,0.464845549297286,0,0,0.924100740528266,0.532306030317022,0,0.37064843820784,0.429374660225974,0.372158369359667,0,0.38126038784765,0,0,0,0,0.179872457583315,0.54907405947211,0.471249609382746,0,0,2.10629228119491,0,0,0,0.545999645631943,0.141405431953713,0,0,0.66343897524122,0,0.578775534266688,0,0.608731130888112,0,0.281695602532241,0.143411352204052,0.0982490410131212,0.35667105148125,1.06428319221179,0.211107635297664,1.31717957183961,0,0,0.0962221127255121,0.670302275535787,0,0.847294206991012,0,0,0,1.1486170010348,0.507447609232169,3.82318603571188,1.70894156152249,1.66762242820452,1.64544909234478,1.94541993357815,0.540031437238115,1.58625035258854,0.747768497892312,0.962479855263359,0.245040215981032,1.48642540100575,0.865615277858669,0.569134746787313,1.4348364545594,1.1974762285969,1.34053759092657,0.423347165447766,0.649243880549111,0.561594356226918,1.36940807419915,0.47003968731907,2.50634477090067,1.01575066680962,0.1605880751037,1.00899853595524,0.851692475380653,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0.278406173895242,0,0,0.99921590399346,1.4098700508785,1.49712432326576,0.146508179271894,2.30584991324076,0.557216921387392,0.568272293612826,0.95497793895076,0.593929361665277,0,0.994147647766298,1.1253553312841,0.222617410045812,0.329607748453519,1.47787785689595,1.79323189425963,2.76283915531148,0.755798243562828,0.102268682502155,1.10776324914963,0.311039587661807,0.359473404589307,0.537063524026827,0,0.789147245095469,4.7896618469388,1.11136990144637,0,0.649376687132959,1.99613798001194,0,0.524759999977174,0.724999575434793,0.227586896570999,1.01701460117107,0.236387681767936,1.37897349296586,0.291604613383254,0.520874984799877,1.77148277162768,1.08536794762867,3.05163472634166,1.99042667876204,1.47773809476774,1.09692698576986,0.10893846351899,0.278847488557207,1.30815439456455,0.455768223388005,0.46112780877612,0.628303510868405,0.217294743844016,1.27600463892768,0.274792780205587,0.533034776018635,1.02193298195737,0.156980256395025,0.498635045700469,0,0.392125068635479,0.167821586975843,0,0.794682894901893,1.68798451622422,0,0.282706142867882,1.08194319871046,0,0.973033209536731,1.22206028986725,0.296521128680622,0,0.104421949505455,1.41542379259422,0.802577647298789,0.468528891450678,0.364909578431332,0.19566461893209,0.728341138602278,1.18375320854817,3.62972148145992,2.75465485467441,1.5796644907122,0,0.207376382794494,0,0,0,0,0.284609546029793,1.24807205711825,0.520679215005393,0.195984794828755,0.870592065804026,1.22308667769421,1.0319161948297,0.0967563312890851,0.146178634172371,0.246346371159628,1.35784623083787,1.059073520298,0.90392296312213,0,0.19871461170299,1.2029051231617,0.586654148204409,0.400794101257669,1.70762395791482,0,0.432271251462318,0.572682980829578,0.686379991447858,0.14405479798815,0,0.235694034616795,0.951329442515298,0.732219924186332,0.611989305817931,1.15580235960608,1.20084057741958,1.36905378891993,5.10986352267889,0.429765441419957,1.05154941711726,0.279282401272254,1.60412296808179,0,0.399358000997982,0,0.223171457441873,0.604651252380536,0,1.16495949527454,0.157566364614447,0.329663433524666,0.202210631562555,0,0.508039992394707,0.795229689809303,4.08610218334727,0.482259445395058,0.275078873194468,0,0.449947783103001,0,1.57948847310864,0.670869375198532,0.315222829196793,0.944182586429966,0.211200673038813,0,0.383830394638891,0.714695326373367,1.98627591109629,2.5426853765475,0,0,0,0,0.246277562248017,1.02232813071253,0.79318464064088,0.146552233678082,0,1.29282956361551,1.98348902614035,0.684347351537318,2.11444506695002,1.38823636338003,0.628817220398664,3.72815149812476,4.46549419630756,0.592834895693833,0.121792598380896,0.638341257770182,0,0.2506898940227,0.612691153526923,0.327872630709804,0.157054096250234,3.54427271986794,1.22026264901963,1.251909307065,0,1.33114861844223,1.05563885000352,0.553394539744923,0.249960815924213,0,0.285465333544967,0.705797459094515,1.40500471742064,0.869526171664951,0.149254802886874,0,0,0.947015026375446,1.25783950876288,0,0.457680136793847,0.604923695052956,0.310874401165561,0.443565449968902,0.477890301491107,0.449803112163605,0.776314784381297,0.829412415681711,0.265841714557995,0.521745061811734,0.901545653983311,0.761610424337591,0,0.545545977607678,0.644463342254931,0,1.19428766609585,0,0.343395705182793,0,0,0.192619830407303,0.428883182749851,0,0.453411851024545,0.231522474323834,0,0.537266523244462,0.617602894321944,0.219284049578707,0.530067437837643,1.15748422962549,0.506827321959218,0.76872455576384,0.690860683462397,0,1.38258436151731,0.584580926518165,0.132864840313363,1.30852315404675,0,0.983091635014877,0.211312123358627,0,0.213383459388282,0.688859918643263,0,0.736423801007363,0,0.622077260032973,0.383683113910955,1.29389773676018,0.157265941855896,1.74735421107222,0.169732529954025,0.637724760305049,0.247871528518004,0,0.954013051960256,2.12926711503384,0,0,0.3062454773532,0.770750701157514,1.41696576325585,2.55414174491442,2.05116364240755,2.7727886584389,1.10651603942749,0.968853873791107,1.42769420259154,0.294443155503077,0.589848616738702,0.550285795565037,0.346576998451015,0,0,0.198916222116275,0.82731361184183,0,0,1.30953347240711,0.163771917510097,0.739280431085226,1.08060135389431,1.56215619722769,0.826747186004736,1.14148458349032,2.7348740450911,1.09651553371436,1.98484471355718,0.175871244359621,0.511049710558381,0.535701835878287,1.3451348888753,1.82089681270989,0.455324382702595,0.620916591138472,1.15233987555779,0,1.4953341254903,0.789273282754189,0.354581522651905,0.889851215136553,1.0989032999072,0.942693539496011,0.280272163313789,3.65263488203798,0.431855182437243,2.38875843943525,1.35805433935647,0.316027223465453,0.581207126840626,0.347716544605159,1.60342272946051,0.207216164163037,0.3414369541879,0.691259661814092,0,0.473328002922261,0.681707238073262,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,1.1598144313382,0.971421986118279,0.233939463462106,0.596852325484105,1.54596118010839,0.11294608203896,0.109940516745429,0.150962843566674,0.617393264863557,0,0.470317296361523,1.47088993052343,0.235676547101626,1.37415926980462,0.297046400327086,2.113278637917,0.679708458751268,2.16163011353663,1.80482086326016,0.799529247399431,0.535661815816973,1.05868461514708,0.0802413666891683,0,1.37618785021362,0.716697915757256,0.473314686579554,0.951880862672806,3.49080552272302,1.0580536810308,1.11598505450025,0.462175628631418,0.865253124247578,0.252332849670158,0.218531143927391,0.760191006068622,0.305966489225945,0,0.18378979906969,0,0.833565680400634,1.33982065078089,2.48750831837634,1.13776295448085,0.426467963801962,0.952257725854961,2.00225620491619,2.3588391432426,0.448527450322454,0.572824424503484,1.0105859447911,0.653150243690884,0,2.08791364345221,1.29099969706817,1.99596213927608,0.0814032686109745,0.213454691755431,0,0.988077223172456,0,0.855690109280065,1.22068853494722,1.33151354837103,3.42165449104745,0.961705476909699 | |||
|short_description=p6@FCHSD2 | |||
}} |
Revision as of 09:18, 11 January 2014
Short description: | p6@FCHSD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FCHSD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -28bp_to_NM_014824, uc001oth.3, uc009ytl.2, uc010rrg.1_5end |
EntrezGene: | FCHSD2 |
HGNC: | 29114 |
UniProt: | O94868 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.68e-17 | 53 |
common lymphoid progenitor | 1.68e-17 | 53 |
lymphoid lineage restricted progenitor cell | 6.97e-17 | 52 |
leukocyte | 7.17e-15 | 136 |
hematopoietic stem cell | 2.98e-13 | 168 |
nongranular leukocyte | 4.78e-12 | 115 |
hematopoietic cell | 5.30e-12 | 177 |
mature alpha-beta T cell | 3.59e-11 | 18 |
alpha-beta T cell | 3.59e-11 | 18 |
immature T cell | 3.59e-11 | 18 |
mature T cell | 3.59e-11 | 18 |
immature alpha-beta T cell | 3.59e-11 | 18 |
B cell | 4.92e-11 | 14 |
hematopoietic oligopotent progenitor cell | 2.17e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.17e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 2.29e-10 | 120 |
T cell | 1.55e-09 | 25 |
pro-T cell | 1.55e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.58e-19 | 114 |
neural tube | 3.81e-14 | 56 |
neural rod | 3.81e-14 | 56 |
future spinal cord | 3.81e-14 | 56 |
neural keel | 3.81e-14 | 56 |
regional part of nervous system | 2.14e-13 | 53 |
regional part of brain | 2.14e-13 | 53 |
regional part of forebrain | 1.06e-10 | 41 |
forebrain | 1.06e-10 | 41 |
anterior neural tube | 1.06e-10 | 41 |
future forebrain | 1.06e-10 | 41 |
regional part of cerebral cortex | 2.90e-10 | 22 |
brain grey matter | 4.55e-10 | 34 |
gray matter | 4.55e-10 | 34 |
neocortex | 5.20e-10 | 20 |
telencephalon | 7.63e-10 | 34 |
cerebral hemisphere | 8.63e-10 | 32 |
brain | 2.37e-09 | 68 |
future brain | 2.37e-09 | 68 |
regional part of telencephalon | 6.13e-09 | 32 |
central nervous system | 1.06e-08 | 81 |
nervous system | 1.60e-08 | 89 |
cerebral cortex | 1.88e-08 | 25 |
pallium | 1.88e-08 | 25 |
neural plate | 3.62e-08 | 82 |
presumptive neural plate | 3.62e-08 | 82 |
neurectoderm | 2.59e-07 | 86 |