FFCP PHASE1:Hg19::chr11:73388527..73388572,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=5870 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9786 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=181bp_to_AF052130_5end | |||
|description=CAGE_peak_6_at_RAB6A_5end | |||
|id=chr11:73388527..73388572,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002231;1.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,1.41e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.19e-12!115;UBERON:0001049!3.79e-11!57;UBERON:0005068!3.79e-11!57;UBERON:0006241!3.79e-11!57;UBERON:0007135!3.79e-11!57;UBERON:0002780!4.54e-10!41;UBERON:0001890!4.54e-10!41;UBERON:0006240!4.54e-10!41;UBERON:0001017!5.58e-10!82;UBERON:0003080!2.15e-09!42;UBERON:0005743!2.51e-09!86;UBERON:0000073!5.99e-09!94;UBERON:0001016!5.99e-09!94;UBERON:0002616!6.67e-09!59;UBERON:0000955!1.92e-08!69;UBERON:0006238!1.92e-08!69;UBERON:0002619!3.22e-08!22;UBERON:0001869!4.04e-08!32;UBERON:0002020!4.19e-08!34;UBERON:0003528!4.19e-08!34;UBERON:0001893!5.95e-08!34;UBERON:0002791!9.70e-08!33;UBERON:0000956!2.73e-07!25;UBERON:0000203!2.73e-07!25;UBERON:0001950!4.34e-07!20;UBERON:0003101!7.70e-07!22;UBERON:0000079!7.70e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.58e-14;22!UBERON:0000956;6.45e-12;25!UBERON:0000203;6.45e-12;25!UBERON:0001950;2.65e-11;20!UBERON:0002791;1.60e-10;32!UBERON:0001869;3.33e-10;32!UBERON:0003528;3.52e-10;34!UBERON:0002020;3.52e-10;34!UBERON:0003937;1.68e-09;12!UBERON:0005399;1.68e-09;12!UBERON:0001893;1.47e-08;34!UBERON:0002367;3.14e-08;11!UBERON:0010147;3.14e-08;11!UBERON:0002780;2.34e-07;41!UBERON:0001890;2.34e-07;41!UBERON:0001871;8.40e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.53e-14,22;UBERON:0003528,1.75e-12,34;UBERON:0002020,1.75e-12,34;UBERON:0000956,2.11e-12,25;UBERON:0000203,2.11e-12,25;UBERON:0002791,4.54e-12,32;UBERON:0001869,4.54e-12,32;UBERON:0000073,9.59e-12,53;UBERON:0002616,9.59e-12,53;UBERON:0001950,1.06e-11,20;UBERON:0001893,4.04e-11,34;UBERON:0002780,5.24e-11,41;UBERON:0001890,5.24e-11,41;UBERON:0003080,5.24e-11,41;UBERON:0006240,5.24e-11,41;UBERON:0001017,6.05e-11,81;UBERON:0000955,7.37e-11,68;UBERON:0006238,7.37e-11,68;UBERON:0001049,8.36e-11,56;UBERON:0005068,8.36e-11,56;UBERON:0006241,8.36e-11,56;UBERON:0007135,8.36e-11,56;UBERON:0003937,1.32e-09,12;UBERON:0005399,1.32e-09,12;UBERON:0001016,3.90e-09,89;UBERON:0002367,2.51e-08,11;UBERON:0010147,2.51e-08,11;UBERON:0009846,2.51e-08,11;UBERON:0003353,2.51e-08,11;UBERON:0004902,2.51e-08,11;UBERON:0003820,2.51e-08,11;UBERON:0009847,2.51e-08,11;UBERON:0003075,7.71e-08,82;UBERON:0007284,7.71e-08,82;UBERON:0003056,1.42e-07,61;UBERON:0002346,3.41e-07,86;UBERON:0001871,3.61e-07,6;UBERON:0000349,6.46e-07,5 | |||
|phase1_expression=1.81678379270557,1.07050261945492,1.40954404095971,0,1.34088328328186,0.872338524100369,0,0.631719873426831,1.04474251279935,0,0,0,0,0.247532705920093,0,0,0.602694528023977,0,0,0.492484232307152,0,0.313454721478088,0.286235987131057,0.273748850145768,0.125542639594803,0.152826811495903,0.0821005894499457,0,0,0,0.154816123316076,0,0,0.369754010166788,0.232401601740905,0,0,0,0.200544447470142,0,0.671746422719773,0,0.515151135268373,1.01778767145695,0,0.242584061187816,0.464858073811369,0,0.309706370895104,0,0.256160706529101,0,0,0,1.35426486594342,0.752969358170419,0.272906150057846,0.224723484445085,1.22433556948361,0,0,0.329851300186716,0.398927315243264,0,0,0.56738522469114,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0.211255286311942,0.637812899895131,0,0.112328631146495,0.600707571366025,0.32145117339416,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.526768169550154,0,0,0.205601498999509,1.00311897234407,0,0,1.94826728407911,0.222820913770347,0.294605907474837,0,0.541607727530031,0.384273959177026,0.260118695119756,0,0,0.869409257205157,0.14828656316206,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.144824403882799,0,0.670700859703636,0.12786256184353,1.0843174571537,0,0.579386075843295,0.795285947051099,0.486634870302636,0.472674085820339,0,0.351339142772504,0.261958150995425,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0.694281003215189,0,0.419499436209906,0.825354125820202,0,0.775250277507987,0.35576626268671,0.66944122552934,0.402829317109147,1.52054421143703,0.488124115096339,1.47065232138347,3.24056779152704,0.267899184852239,0.22452937262617,0,0,0.949265659568129,0.366403487860815,0,0,0.436094052142534,0.993943903390637,1.39293562831038,0.132409180813219,0.573673241497627,1.06400514659507,0,0,0.98667019366864,0.933633106199299,0.134710672069688,0.163461903113459,0.302714855289863,0,0,1.24864030732128,0,0.448346041655403,0.23486899728753,0.161872944368132,0,0.408308342509787,0.122834317311768,0,3.56400857184616,0.989067717114227,1.82032272387605,0,0.336672227908132,0.500474079487857,0.554128230968366,0.438977620880838,0.612975591598039,0.600952235626387,0.226864366320042,0.538168907066586,0,0.635795703478686,0.600182192168805,0.206105058476878,0,0.558350568994769,0,0.876933046450788,0,0.644349290496095,1.45481451136931,0,0.302256294682921,0,0.57978255948989,0.818238361772504,0.860413786167011,0.975789649036763,0,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0.643240938192885,1.38134921352481,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.860919069801795,0.514703430895577,0.98775256867763,0,0.301586917234893,0.740707561268237,0,0,0,0.231860809950154,0,0.721832238805369,0,0.761016608938393,0,0,0.738651018262192,0.234004265139238,0.148631162288728,0,0.335964256397719,0.992425680696705,0.626909658919938,0,0,0,0.704387472105808,1.24396869324463,0.288239906833923,1.13618190083742,0.190493682876507,0,1.17217447210047,0,0.205654985406647,0,0.857479297891735,0.112131084345361,0,0.1466765716419,1.03417372606222,0,0.845302752556,1.32969058292435,0,0.257207374262142,0,0.532844358032199,0.714889968290738,0,0,0.325736184293735,0,0,0,0.871533458600294,0.899756920638513,0,0,0,1.19812427745791,1.14861935834114,0,0.289562613335158,0.205476322550383,0,0.224170287987055,0,0,0.385029108839245,3.81141936333695,1.30139853857622,0,0.670065061337395,0,0,0,0.828831026872071,0,0.500170521059677,0,0.415941723061614,0.178428988797162,0.315404830067869,0.35142424497814,0.902838299183157,0,1.03473071292505,0.664225598535437,0.184369168541703,1.04260337361699,0.587403472388222,0.686286847621712,0,0.215714200818617,0,0.303127571446259,0,0,0.496215615637554,0.306923946576125,1.40330047216537,1.15325234330131,0.511707249066704,0.804269605718038,0,0.462629081407967,0.532685175939381,1.06765302817952,2.07701771673448,0.581051892299796,3.38406458856542,7.21823293091825,8.83977493784605,0.68888668898764,1.0925470080403,3.40923478894503,0,0.385076685522074,0,0,0.105551628892876,0,0.510281115829547,0.647747748306418,0,0,0,0.254876273045038,0.831076008928724,0,0,0.261435451024901,0,0,1.30151357865721,0.9273691048295,0.457847324091717,0.165018999841176,0.574265537996172,0.650060246036521,0,0.96670718292122,0.154048617114644,0.307007349452259,0.413509717453592,0.966782203814463,0.290033387828457,0.170453254832202,0.712256285173899,4.62797763010739,1.92190067365106,0.255225424989168,2.52894452138875,1.39453664789186,0.62962469366128,0,0,0,0,0.37064843820784,0.143124886741991,0,0,0.38126038784765,0,0,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0,0,0.842516912477962,0,0.243713489631284,0,1.63799893689583,1.41405431953713,0,0,0,0,0,0.655894752046633,0.202910376962704,0.30982349809975,0.281695602532241,0.286822704408103,0.196498082026242,0,0,0.844430541190656,0.329294892959902,0.379473173765715,0,0.192444225451024,0,0,1.12972560932135,0.43050537267123,0,0,0.459446800413919,0,0,0,0.238231775457789,0.822724546172388,0,0.540031437238115,0.79312517629427,0.320472213382419,0,0,0.929015875628594,0.577076851905779,0.213425530045242,0.159426272728822,0.199579371432817,0.191505370132367,0,0,0.280797178113459,0,0,2.50634477090067,0.169291777801603,0,0.201799707191048,0,0,0.614481528616916,0,0,0,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0.37428108081644,1.46508179271894,0.121360521749513,0.222886768554957,0,0.23874448473769,0,0.614321404198464,1.9882952955326,1.96937182974718,0.222617410045812,0.16480387422676,0,0.398495976502139,0.276283915531148,0.251932747854276,0,0.246169610922139,0,0.179736702294654,0.358042349351218,0.511572370226872,0.197286811273867,2.3948309234694,1.11136990144637,3.87733098438087,2.50473865036998,0,0.260427761085233,0,0,0.1137934482855,0.508507300585533,0,1.03423011972439,0,0.694499979733169,0,0.60298219312704,1.52581736317083,1.10579259931225,1.47773809476774,0.438770794307945,0.21787692703798,0.557694977114413,0.461701551022782,0.455768223388005,0.46112780877612,3.50054813198111,0.108647371922008,0,1.19076871422421,1.06606955203727,0,0.784901281975124,0.166211681900156,0.225595660617181,0.19606253431774,0,0,0.635746315921515,1.05499032264014,0.652931232636591,0.424059214301822,0,0.995261931078505,0.353830258013357,1.22206028986725,0.296521128680622,0.123563938946503,0.208843899010911,0.404406797884062,0,0.937057782901357,0,0.391329237864179,1.21390189767046,0.394584402849391,0,1.22429104652196,0.63186579628488,0.901940516486955,1.03688191397247,0,0.661983911750998,0,0,0,0.554698692052555,0.173559738335131,0.293977192243133,0.34823682632161,0.34945333648406,0.343972064943233,0.774050650312681,0.292357268344742,0.246346371159628,0.872901148395775,0.353024506766001,0.677942222341597,0.274083849293502,0,0.50648636764703,0.391102765469606,0.0801588202515337,0.426905989478705,0.19980960958213,0.144090417154106,0.114536596165916,1.54435498075768,0.288109595976299,0.248505071130865,0.235694034616795,0.135904206073614,0.313808538937,0.203996435272644,2.02265412931063,2.40168115483916,0.410716136675979,0,0,0,0.837847203816763,0.687481272035051,1.43574604915363,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0.393915911536118,0.0824158583811665,0.337017719270924,0.492137407573744,0.0846733320657845,1.59045937961861,3.40508515278939,0.964518890790115,0.412618309791701,1.66176135211674,0.449947783103001,0,0.607495566580247,0.335434687599266,0.630445658393585,0.104909176269996,0.528001682597033,0.35857467866569,0.767660789277781,1.42939065274673,0.662091970365432,0,1.08599920350743,0,2.61269888087527,1.19730191562487,0.164185041498678,0.340776043570843,0,2.19828350517124,0,1.0342636508924,0.39669780522807,0.171086837884329,0,0.854299300541557,0.78602152549833,1.24271716604159,0.992332043623902,0.395223263795889,0.121792598380896,1.91502377331055,0,0.2506898940227,0,0,1.25643277000187,1.77213635993397,3.29470915235301,2.003054891304,0.573409195690071,0.887432412294818,0.124192805882767,0.553394539744923,0.124980407962107,0.606596470166591,0.570930667089935,0.470531639396343,0.468334905806882,0.144921028610825,0.74627401443437,0.467426619694449,0,0,0,0,0.457680136793847,0.453692771289717,0.466311601748341,0.147855149989634,0.63718706865481,1.34940933649081,0.310525913752519,1.24411862352257,0,0.521745061811734,0.450772826991655,0.761610424337591,0.406870733204662,0.363697318405119,0.322231671127465,0,0.398095888698616,0,1.37358282073117,0,0,0.192619830407303,0,0.260994291965212,0.226705925512272,0,0.244736704506468,0.358177682162975,0.308801447160972,0.438568099157414,0.353378291891762,0.192914038270915,0.506827321959218,0,0.345430341731199,0,3.31820246764154,1.16916185303633,0.132864840313363,0.654261577023377,0.655219697692825,0.983091635014877,0,0.19998739585493,0.213383459388282,0.344429959321631,0,0,0.139879507719444,1.24415452006595,0.127894371303652,0.323474434190045,0.943595651135378,0.54604819096007,0.169732529954025,0.425149840203366,0.495743057036009,0,0.318004350653419,0.315446980005013,0,0.705351887381368,0.6124909547064,0.642292250964595,0,2.55414174491442,5.74325819874114,2.26864526599546,0.207471757392654,1.45328081068666,0,0.88332946650923,0.11796972334774,0,0.346576998451015,1.1441462864015,0,0.198916222116275,0.225630985047772,0.20170506870352,0.781514011233092,2.61906694481422,0.49131575253029,0.147856086217045,0.675375846183947,0.781078098613847,2.06686796501184,0.760989722326882,3.82882366312754,0.548257766857182,0.992422356778588,0.175871244359621,0.255524855279191,0.535701835878287,1.00885116665647,0.606965604236632,0.91064876540519,0.79832133146375,0,0.171488009437418,0.611727596791485,0.460409414939944,0.354581522651905,0.444925607568277,0.78493092850514,1.57115589916002,0,0,0.863710364874486,1.43325506366115,0.214429632529969,0.158013611732727,0.464965701472501,0.173858272302579,0,0.828864656652147,1.3657478167516,0,0,0.354996002191696,0.937347452350735,1.27016115057279,0.68732060563215,0,0,0.335566295393377,1.3741032706134,0.365753774946808,0,0.102662806856247,1.1598144313382,0.971421986118279,0.467878926924211,0.795803100645473,0.118920090777569,0.67767649223376,0.769583617218004,0.301925687133347,1.69783147837478,0.655678681511872,0.470317296361523,0.245148321753905,0.471353094203252,0.785233868459781,0.297046400327086,0.8453114551668,0.169927114687817,0.657887425858975,0,0.399764623699716,0.535661815816973,0,0.561689566824178,0,0,0.286679166302903,0.157771562193185,0.679914901909147,3.05445483238264,0.5290268405154,0.371995018166751,0.462175628631418,0.432626562123789,0.126166424835079,0.218531143927391,0.760191006068622,1.1218771271618,0.801652215796681,0.735159196278759,0.752122617877125,0.985123076837112,0.267964130156178,2.48750831837634,0.827463966895162,0.213233981900981,0.476128862927481,0.387533459016037,0.372448285775147,0,0.636471582781649,0.606351566874658,0.653150243690884,0,0.0673520530145875,0.430333232356058,0.99798106963804,0.162806537221949,0.960546112899439,0,0.808426818959282,0,0.244482888365733,0.813792356631477,0,0.201273793591026,0 | |||
|short_description=p6@RAB6A | |||
}} |
Revision as of 09:21, 11 January 2014
Short description: | p6@RAB6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_6_at_RAB6A_5end |
Coexpression cluster: | NA |
Association with transcript: | 181bp_to_AF052130_5end |
EntrezGene: | RAB6A |
HGNC: | 9786 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 1.41e-07 | 3 |