FFCP PHASE1:Hg19::chr11:85955787..85955854,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8726 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3188 | |||
|TSSclassifier=strong | |||
|UniProt=E9PJK2,O75530 | |||
|association_with_transcript=0bp_to_ENST00000351625,ENST00000528180,NM_003797,NM_152991,uc001pbp.2,uc001pbq.2,uc001pbr.2,uc001pbs.2,uc010rtm.1_5end | |||
|description=CAGE_peak_1_at_EED_5end | |||
|id=chr11:85955787..85955854,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.36e-10!235;DOID:14566!2.65e-09!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.36e-10,235;DOID:14566,2.65e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.93e-18!115;UBERON:0001049!3.67e-14!57;UBERON:0005068!3.67e-14!57;UBERON:0006241!3.67e-14!57;UBERON:0007135!3.67e-14!57;UBERON:0003080!2.59e-13!42;UBERON:0002780!2.75e-13!41;UBERON:0001890!2.75e-13!41;UBERON:0006240!2.75e-13!41;UBERON:0002020!1.04e-11!34;UBERON:0003528!1.04e-11!34;UBERON:0002616!2.87e-11!59;UBERON:0001017!3.39e-11!82;UBERON:0001893!7.79e-11!34;UBERON:0002791!9.40e-11!33;UBERON:0001869!1.30e-10!32;UBERON:0000955!2.06e-10!69;UBERON:0006238!2.06e-10!69;UBERON:0005743!8.96e-10!86;UBERON:0000073!3.94e-09!94;UBERON:0001016!3.94e-09!94;UBERON:0000956!1.56e-08!25;UBERON:0000203!1.56e-08!25;UBERON:0002619!2.38e-08!22;UBERON:0001950!9.63e-08!20;UBERON:0002346!7.60e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.81e-10;41!UBERON:0001890;3.81e-10;41!UBERON:0003528;5.04e-10;34!UBERON:0002020;5.04e-10;34!UBERON:0002791;5.35e-10;32!UBERON:0001869;1.48e-09;32!UBERON:0001893;4.03e-09;34!UBERON:0000073;1.33e-08;53!UBERON:0002616;1.33e-08;53!UBERON:0000956;2.27e-08;25!UBERON:0000203;2.27e-08;25!UBERON:0002619;3.27e-08;22!UBERON:0001950;1.28e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.59e-17,114;UBERON:0001049,4.16e-14,56;UBERON:0005068,4.16e-14,56;UBERON:0006241,4.16e-14,56;UBERON:0007135,4.16e-14,56;UBERON:0000073,1.33e-13,53;UBERON:0002616,1.33e-13,53;UBERON:0002780,2.75e-13,41;UBERON:0001890,2.75e-13,41;UBERON:0003080,2.75e-13,41;UBERON:0006240,2.75e-13,41;UBERON:0003528,1.04e-11,34;UBERON:0002020,1.04e-11,34;UBERON:0001017,4.14e-11,81;UBERON:0002791,5.35e-11,32;UBERON:0001893,7.79e-11,34;UBERON:0001869,1.30e-10,32;UBERON:0000955,2.50e-10,68;UBERON:0006238,2.50e-10,68;UBERON:0001016,2.59e-10,89;UBERON:0000956,1.56e-08,25;UBERON:0000203,1.56e-08,25;UBERON:0002619,2.38e-08,22;UBERON:0011216,7.91e-08,223;UBERON:0001950,9.63e-08,20;UBERON:0002346,1.36e-07,86;UBERON:0003075,2.54e-07,82;UBERON:0007284,2.54e-07,82 | |||
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| |||
|short_description=p1@EED | |||
}} |
Revision as of 09:44, 11 January 2014
Short description: | p1@EED |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EED_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000351625, ENST00000528180, NM_003797, NM_152991, uc001pbp.2, uc001pbq.2, uc001pbr.2, uc001pbs.2, uc010rtm.1_5end |
EntrezGene: | EED |
HGNC: | 3188 |
UniProt: | E9PJK2O75530 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.59e-17 | 114 |
neural tube | 4.16e-14 | 56 |
neural rod | 4.16e-14 | 56 |
future spinal cord | 4.16e-14 | 56 |
neural keel | 4.16e-14 | 56 |
regional part of nervous system | 1.33e-13 | 53 |
regional part of brain | 1.33e-13 | 53 |
regional part of forebrain | 2.75e-13 | 41 |
forebrain | 2.75e-13 | 41 |
anterior neural tube | 2.75e-13 | 41 |
future forebrain | 2.75e-13 | 41 |
brain grey matter | 1.04e-11 | 34 |
gray matter | 1.04e-11 | 34 |
central nervous system | 4.14e-11 | 81 |
regional part of telencephalon | 5.35e-11 | 32 |
telencephalon | 7.79e-11 | 34 |
cerebral hemisphere | 1.30e-10 | 32 |
brain | 2.50e-10 | 68 |
future brain | 2.50e-10 | 68 |
nervous system | 2.59e-10 | 89 |
cerebral cortex | 1.56e-08 | 25 |
pallium | 1.56e-08 | 25 |
regional part of cerebral cortex | 2.38e-08 | 22 |
organ system subdivision | 7.91e-08 | 223 |
neocortex | 9.63e-08 | 20 |
neurectoderm | 1.36e-07 | 86 |
neural plate | 2.54e-07 | 82 |
presumptive neural plate | 2.54e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.36e-10 | 235 |
disease of cellular proliferation | 2.65e-09 | 239 |