FFCP PHASE1:Hg19::chr13:31480855..31480904,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=205bp_to_CU691826_5end | |||
|description=CAGE_peak_1_at_CU691826_5end | |||
|id=chr13:31480855..31480904,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.52e-23!180;CL:0000680!3.46e-20!57;CL:0000056!3.46e-20!57;CL:0000355!3.46e-20!57;CL:0000359!1.08e-18!32;CL:0000192!1.78e-18!42;CL:0000514!1.78e-18!42;CL:0000187!3.36e-18!54;CL:0000393!2.77e-16!60;CL:0000211!2.77e-16!60;CL:0000183!1.22e-15!59;CL:0002539!7.60e-12!10;CL:0000222!1.84e-11!119;CL:0000048!2.45e-11!430;CL:0000057!5.08e-11!75;CL:0000723!1.01e-10!436;CL:0002334!1.17e-10!12;CL:0000034!6.14e-10!444;CL:0002595!2.39e-07!5;CL:0000136!7.36e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.36e-24;32!CL:0002539;1.05e-15;10!CL:0000192;2.99e-14;43!CL:0002595;8.73e-14;5!CL:0002334;1.32e-12;12!CL:0000569;1.53e-11;4!CL:0000153;2.35e-10;9!CL:0000447;2.35e-10;9!CL:0000136;2.01e-09;13!CL:0000187;2.68e-09;55!CL:0002615;3.81e-09;3!CL:0002579;1.27e-08;3!CL:0000327;7.03e-08;15!CL:0000138;4.07e-07;6!CL:0002593;5.24e-07;2!CL:0000393;9.05e-07;61!CL:0000211;9.05e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.81e-25,32;CL:0000192,3.53e-19,43;CL:0000514,3.53e-19,43;CL:0002539,1.39e-15,10;CL:0000187,1.79e-15,55;CL:0000680,2.20e-14,58;CL:0000056,2.20e-14,58;CL:0000355,2.20e-14,58;CL:0002595,9.26e-14,5;CL:0000393,2.10e-13,61;CL:0000211,2.10e-13,61;CL:0002334,1.17e-12,12;CL:0000569,1.35e-11,4;CL:0000011,1.35e-11,4;CL:0000153,1.99e-10,9;CL:0000447,1.99e-10,9;CL:0000136,3.62e-10,15;CL:0000048,5.58e-10,427;CL:0000723,1.24e-09,433;CL:0000034,3.46e-09,441;CL:0002615,4.20e-09,3;CL:0000222,1.25e-08,121;CL:0002579,1.61e-08,3;CL:0000327,5.64e-08,15;CL:0000058,3.63e-07,6;CL:0000138,3.63e-07,6;CL:0002593,5.48e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;2.99e-14;43!CL:0000011;1.53e-11;4!CL:0000355;2.26e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!1.20e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.85e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.08e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.59e-21!42;UBERON:0003509!1.59e-21!42;UBERON:0004572!1.59e-21!42;UBERON:0002049!1.53e-19!79;UBERON:0007798!1.53e-19!79;UBERON:0004872!1.87e-19!84;UBERON:0004573!2.82e-19!33;UBERON:0004571!2.82e-19!33;UBERON:0001981!3.95e-19!60;UBERON:0007500!3.95e-19!60;UBERON:0004537!3.95e-19!60;UBERON:0006965!3.95e-19!60;UBERON:0001134!5.13e-19!61;UBERON:0002036!5.13e-19!61;UBERON:0003082!5.13e-19!61;UBERON:0002385!5.46e-18!63;UBERON:0001015!5.46e-18!63;UBERON:0000383!5.46e-18!63;UBERON:0004535!2.76e-17!110;UBERON:0001009!3.54e-17!113;UBERON:0004290!6.62e-17!70;UBERON:0000055!1.14e-16!69;UBERON:0000914!4.56e-15!83;UBERON:0002329!4.56e-15!83;UBERON:0003077!4.56e-15!83;UBERON:0003059!4.56e-15!83;UBERON:0007282!4.56e-15!83;UBERON:0009618!4.56e-15!83;UBERON:0007285!4.56e-15!83;UBERON:0000486!1.13e-14!82;UBERON:0003914!1.04e-13!118;UBERON:0004237!7.60e-12!10;UBERON:0004695!7.60e-12!10;UBERON:0002111!7.60e-12!10;UBERON:0004178!7.60e-12!10;UBERON:0000947!2.56e-11!21;UBERON:0010191!2.56e-11!21;UBERON:0001135!8.35e-10!15;UBERON:0000490!1.65e-09!138;UBERON:0005256!4.25e-09!143;UBERON:0002100!9.45e-09!216;UBERON:0003688!2.22e-08!6;UBERON:0002358!2.22e-08!6;UBERON:0003684!2.22e-08!6;UBERON:0001178!2.22e-08!6;UBERON:0000948!9.47e-08!24;UBERON:0005498!9.47e-08!24;UBERON:0004140!9.47e-08!24;UBERON:0009881!9.47e-08!24;UBERON:0004141!9.47e-08!24;UBERON:0003084!9.47e-08!24;UBERON:0007005!9.47e-08!24;UBERON:0004139!9.47e-08!24;UBERON:0004291!9.47e-08!24;UBERON:0004457!1.05e-07!12;UBERON:0000042!1.05e-07!12;UBERON:0007100!2.22e-07!27;UBERON:0003834!2.39e-07!5;UBERON:0001533!2.39e-07!5;UBERON:0000992!2.96e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.46e-21;33!UBERON:0004571;3.46e-21;33!UBERON:0004457;8.95e-19;9!UBERON:0000042;8.95e-19;9!UBERON:0003688;4.54e-16;6!UBERON:0002358;4.54e-16;6!UBERON:0003684;4.54e-16;6!UBERON:0001178;4.54e-16;6!UBERON:0004237;1.05e-15;10!UBERON:0004695;1.05e-15;10!UBERON:0002111;1.05e-15;10!UBERON:0004178;1.05e-15;10!UBERON:0001637;1.07e-15;42!UBERON:0003509;1.07e-15;42!UBERON:0004572;1.07e-15;42!UBERON:0003834;8.73e-14;5!UBERON:0001533;8.73e-14;5!UBERON:0000947;2.04e-10;21!UBERON:0010191;2.04e-10;21!UBERON:0001135;5.68e-10;15!UBERON:0003513;1.02e-09;7!UBERON:0007500;3.37e-07;56!UBERON:0001981;3.37e-07;56!UBERON:0004537;3.37e-07;56!UBERON:0002456;5.24e-07;2!UBERON:0005406;6.11e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,7.34e-24,33;UBERON:0004571,7.34e-24,33;UBERON:0001637,4.14e-22,42;UBERON:0003509,4.14e-22,42;UBERON:0004572,4.14e-22,42;UBERON:0004872,2.51e-17,83;UBERON:0007500,2.62e-17,59;UBERON:0001981,2.62e-17,59;UBERON:0004537,2.62e-17,59;UBERON:0006965,2.62e-17,59;UBERON:0003688,6.35e-16,6;UBERON:0002358,6.35e-16,6;UBERON:0003684,6.35e-16,6;UBERON:0001178,6.35e-16,6;UBERON:0004237,1.39e-15,10;UBERON:0004695,1.39e-15,10;UBERON:0002111,1.39e-15,10;UBERON:0004178,1.39e-15,10;UBERON:0000055,3.36e-14,68;UBERON:0002049,4.72e-14,78;UBERON:0007798,4.72e-14,78;UBERON:0003834,9.26e-14,5;UBERON:0001533,9.26e-14,5;UBERON:0004457,1.32e-13,12;UBERON:0000042,1.32e-13,12;UBERON:0004535,1.69e-13,109;UBERON:0001134,4.23e-13,62;UBERON:0002036,4.23e-13,62;UBERON:0003082,4.23e-13,62;UBERON:0001009,6.28e-13,112;UBERON:0002385,1.61e-12,64;UBERON:0001015,1.61e-12,64;UBERON:0000383,1.61e-12,64;UBERON:0003914,4.03e-12,117;UBERON:0002329,9.33e-11,71;UBERON:0003059,9.33e-11,71;UBERON:0007282,9.33e-11,71;UBERON:0004290,9.33e-11,71;UBERON:0009618,9.33e-11,71;UBERON:0000486,9.49e-11,83;UBERON:0003077,1.56e-10,72;UBERON:0007285,1.56e-10,72;UBERON:0000947,2.07e-10,21;UBERON:0010191,2.07e-10,21;UBERON:0007503,2.32e-10,78;UBERON:0007524,2.57e-10,73;UBERON:0001135,6.78e-10,15;UBERON:0003513,1.06e-09,7;UBERON:0000948,1.30e-07,24;UBERON:0005498,1.30e-07,24;UBERON:0004140,1.30e-07,24;UBERON:0009881,1.30e-07,24;UBERON:0004141,1.30e-07,24;UBERON:0003084,1.30e-07,24;UBERON:0007005,1.30e-07,24;UBERON:0004139,1.30e-07,24;UBERON:0004291,1.30e-07,24;UBERON:0002456,5.48e-07,2;UBERON:0000926,5.52e-07,315;UBERON:0004120,5.52e-07,315;UBERON:0006603,5.52e-07,315;UBERON:0005406,5.96e-07,2 | |||
|phase1_expression=2.54349730978779,3.42560838225573,2.39622486963151,4.00293193412522,7.59833860526389,10.4680622892044,0,0.631719873426831,1.56711376919903,0,0,0,0,1.60896258848061,1.65698687863958,10.0848771967766,6.62963980826375,2.19093027116212,4.87932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,2.1686349143074,3.50936537445123,1.44846518960824,0,2.91980922181582,0.0945348171640679,1.33037638477538,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0.275118041940067,0,0,0,0,0,0,0,0,1.62028389576352,0,0.22452937262617,0,0,0,0.366403487860815,0,0,0,1.98788780678127,0.379891534993739,0.264818361626438,0.573673241497627,0.709336764396714,0.560677600142307,0,0,0,0.134710672069688,0,0.151357427644931,1.15235184896,0,0.624320153660641,0,0.448346041655403,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0.751190294532984,0.453728732640084,0,0,0.635795703478686,0,0,0,0.37223371266318,0.168776332241266,0.0974370051611986,0.252433774244115,0,0.969876340912871,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0.791951872933429,2.71295439353627,0,2.29937879718731,0,0,0,0.239624855491583,0,0,0.434343920002738,0.410952645100767,0.716243852959582,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.736148950314839,0.500170521059677,0.271265023699736,0,0,0,0,0.300946099727719,0,0,1.32845119707087,0,0,0,0,0,0,0,0,0,0,1.98486246255021,0,1.68396056659844,3.97231362692673,1.02341449813341,4.98647155545183,5.93672265779964,0.308419387605311,1.06537035187876,0.246381468041427,4.15403543346897,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0,0,0.290033387828457,0,0,0,0,0,0,2.32422774648643,1.25924938732256,0.6970372701606,1.23213432070436,1.06461206063404,0.869932992075073,1.48259375283136,1.14499909393593,0,0.316379424718726,0.953150969619124,0,0,0.318203247925937,2.35484592059769,0,0.54907405947211,0.471249609382746,0,0,9.26768603725758,0,6.58026422004468,16.9040234810809,0,0,6.78048699721457,1.10273068709225,2.65375590096488,4.82295973779139,1.15755106853338,0.655894752046633,0,0.30982349809975,1.69017361519345,0,0,0,0.354761064070598,6.96655196482292,7.90307743103764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,2.59022384726391,0,0,0,0,0.622079175323615,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.581934098930517,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,0.229160424011684,2.15361907373044,0,0.429226048136571,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04478362020812,0.467426619694449,0.554805861502613,0.947015026375446,2.0125432140206,3.55924488638614,3.20376095755693,4.23446586537069,2.79786961049005,6.65348174953353,2.07085797312813,0.899606224327209,2.01841843939137,0.414706207840855,1.06336685823198,0,2.40412174395549,3.80805212168795,5.2893195316606,2.18218391043071,0.644463342254931,2.78420255927096,0.398095888698616,0,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0.196308467114945,0,0.4226557275834,1.0195626881269,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0.371995018166751,6.00828317220844,4.75889218336168,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0.112131862580613,0.190941474834495,0,0.217716747896961,0,0,0.358611026963382,0.665320713092027,0,0,0,0,0,0,0.813792356631477,0.665756774185513,0.201273793591026,0 | |||
|short_description=p1@CU691826 | |||
}} |
Revision as of 17:12, 11 January 2014
Short description: | p1@CU691826 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU691826_5end |
Coexpression cluster: | NA |
Association with transcript: | 205bp_to_CU691826_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.81e-25 | 32 |
smooth muscle cell | 3.53e-19 | 43 |
smooth muscle myoblast | 3.53e-19 | 43 |
aortic smooth muscle cell | 1.39e-15 | 10 |
muscle cell | 1.79e-15 | 55 |
muscle precursor cell | 2.20e-14 | 58 |
myoblast | 2.20e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.20e-14 | 58 |
smooth muscle cell of the subclavian artery | 9.26e-14 | 5 |
electrically responsive cell | 2.10e-13 | 61 |
electrically active cell | 2.10e-13 | 61 |
preadipocyte | 1.17e-12 | 12 |
cardiac mesenchymal cell | 1.35e-11 | 4 |
migratory trunk neural crest cell | 1.35e-11 | 4 |
GAG secreting cell | 1.99e-10 | 9 |
carbohydrate secreting cell | 1.99e-10 | 9 |
fat cell | 3.62e-10 | 15 |
multi fate stem cell | 5.58e-10 | 427 |
somatic stem cell | 1.24e-09 | 433 |
stem cell | 3.46e-09 | 441 |
adipocyte of omentum tissue | 4.20e-09 | 3 |
mesodermal cell | 1.25e-08 | 121 |
omentum preadipocyte | 1.61e-08 | 3 |
extracellular matrix secreting cell | 5.64e-08 | 15 |
chondroblast | 3.63e-07 | 6 |
chondrocyte | 3.63e-07 | 6 |
smooth muscle cell of the internal thoracic artery | 5.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.08e-10 | 14 |