FFCP PHASE1:Hg19::chr14:45431091..45431175,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54813 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19741 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NXS3,G3V4Y0 | |||
|association_with_transcript=0bp_to_ENST00000396128,ENST00000556500_5end | |||
|coexpression_cluster_id=C1725 | |||
|description=CAGE_peak_1_at_KLHL28_5end | |||
|id=chr14:45431091..45431175,- | |||
|ontology_enrichment_celltype=CL:0000738!5.21e-37!140;CL:0002031!4.96e-28!124;CL:0000037!9.54e-27!172;CL:0000566!9.54e-27!172;CL:0002087!2.36e-25!119;CL:0000988!7.76e-24!182;CL:0002032!8.45e-24!165;CL:0000837!8.45e-24!165;CL:0000766!1.46e-16!76;CL:0000838!1.72e-14!52;CL:0000542!2.75e-14!53;CL:0000051!2.75e-14!53;CL:0000557!5.69e-13!71;CL:0000839!7.45e-13!70;CL:0002057!2.39e-12!42;CL:0002009!4.57e-11!65;CL:0000860!5.11e-11!45;CL:0000791!5.41e-11!18;CL:0000789!5.41e-11!18;CL:0002420!5.41e-11!18;CL:0002419!5.41e-11!18;CL:0000790!5.41e-11!18;CL:0000763!1.14e-10!112;CL:0000049!1.14e-10!112;CL:0002194!2.85e-10!63;CL:0000576!2.85e-10!63;CL:0000040!2.85e-10!63;CL:0000559!2.85e-10!63;CL:0000084!1.56e-09!25;CL:0000827!1.56e-09!25;CL:0000625!7.12e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.06e-11;18!CL:0000789;6.06e-11;18!CL:0002419;6.06e-11;18!CL:0000084;1.66e-09;25!CL:0000542;7.04e-09;53!CL:0002087;1.17e-08;104!CL:0000860;2.58e-08;33!CL:0002057;2.58e-08;33!CL:0000738;4.29e-08;136!CL:0000576;5.61e-08;48!CL:0000766;6.10e-08;69!CL:0000625;7.11e-08;11!CL:0000473;8.98e-07;39!CL:0000234;8.98e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.05e-38,136;CL:0002031,4.04e-29,120;CL:0000037,1.67e-27,168;CL:0002087,2.17e-26,115;CL:0000988,3.46e-25,177;CL:0002032,1.63e-24,161;CL:0000837,1.63e-24,161;CL:0000766,1.21e-17,72;CL:0000838,1.72e-14,52;CL:0000542,2.75e-14,53;CL:0000051,2.75e-14,53;CL:0000557,6.89e-14,67;CL:0000839,8.94e-14,66;CL:0000860,2.39e-12,42;CL:0002057,2.39e-12,42;CL:0002009,6.36e-12,61;CL:0000473,8.88e-12,48;CL:0000234,8.88e-12,48;CL:0000763,3.53e-11,108;CL:0000049,3.53e-11,108;CL:0002194,4.30e-11,59;CL:0000576,4.30e-11,59;CL:0000040,4.30e-11,59;CL:0000559,4.30e-11,59;CL:0000791,5.41e-11,18;CL:0000789,5.41e-11,18;CL:0002420,5.41e-11,18;CL:0002419,5.41e-11,18;CL:0000790,5.41e-11,18;CL:0000084,1.56e-09,25;CL:0000827,1.56e-09,25;CL:0000625,7.12e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;6.06e-11;18!CL:0002057;3.89e-09;42!CL:0000051;7.04e-09;53 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.61e-22!115;UBERON:0002390!7.58e-17!102;UBERON:0003061!7.58e-17!102;UBERON:0002193!3.66e-14!112;UBERON:0001049!6.28e-11!57;UBERON:0005068!6.28e-11!57;UBERON:0006241!6.28e-11!57;UBERON:0007135!6.28e-11!57;UBERON:0002371!4.67e-10!80;UBERON:0002780!7.57e-10!41;UBERON:0001890!7.57e-10!41;UBERON:0006240!7.57e-10!41;UBERON:0001017!1.19e-09!82;UBERON:0003080!1.27e-09!42;UBERON:0001474!2.73e-09!86;UBERON:0002616!6.17e-09!59;UBERON:0005743!1.18e-08!86;UBERON:0000073!2.99e-08!94;UBERON:0001016!2.99e-08!94;UBERON:0001893!4.65e-08!34;UBERON:0002020!7.67e-08!34;UBERON:0003528!7.67e-08!34;UBERON:0000955!7.70e-08!69;UBERON:0006238!7.70e-08!69;UBERON:0002791!1.12e-07!33;UBERON:0001869!1.45e-07!32;UBERON:0000178!3.50e-07!15;UBERON:0000179!3.50e-07!15;UBERON:0000463!3.50e-07!15;UBERON:0002619!3.57e-07!22;UBERON:0004765!6.73e-07!101;UBERON:0001434!6.73e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.48e-07;41!UBERON:0001890;2.48e-07;41!UBERON:0000178;3.33e-07;15!UBERON:0000179;3.33e-07;15!UBERON:0000463;3.33e-07;15!UBERON:0002619;4.03e-07;22!UBERON:0001893;6.40e-07;34!UBERON:0001869;8.83e-07;32!UBERON:0003528;9.41e-07;34!UBERON:0002020;9.41e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.28e-21,114;UBERON:0002390,1.11e-17,98;UBERON:0003061,1.11e-17,98;UBERON:0002193,8.12e-15,108;UBERON:0001049,4.04e-11,56;UBERON:0005068,4.04e-11,56;UBERON:0006241,4.04e-11,56;UBERON:0007135,4.04e-11,56;UBERON:0002371,1.05e-10,76;UBERON:0000073,2.25e-10,53;UBERON:0002616,2.25e-10,53;UBERON:0002405,4.97e-10,93;UBERON:0001474,7.44e-10,82;UBERON:0002780,7.57e-10,41;UBERON:0001890,7.57e-10,41;UBERON:0003080,7.57e-10,41;UBERON:0006240,7.57e-10,41;UBERON:0001017,9.09e-10,81;UBERON:0001016,3.00e-09,89;UBERON:0004765,1.65e-08,90;UBERON:0001893,4.65e-08,34;UBERON:0000955,5.95e-08,68;UBERON:0006238,5.95e-08,68;UBERON:0003528,7.67e-08,34;UBERON:0002020,7.67e-08,34;UBERON:0001869,1.45e-07,32;UBERON:0002791,2.00e-07,32;UBERON:0000178,3.50e-07,15;UBERON:0000179,3.50e-07,15;UBERON:0000463,3.50e-07,15;UBERON:0002619,3.57e-07,22 | |||
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4326 | |||
|short_description=p1@KLHL28 | |||
}} |
Revision as of 19:55, 11 January 2014
Short description: | p1@KLHL28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KLHL28_5end |
Coexpression cluster: | C1725_Neutrophils_Eosinophils_Mast_CD8_Natural_CD4_cord |
Association with transcript: | 0bp_to_ENST00000396128, ENST00000556500_5end |
EntrezGene: | KLHL28 |
HGNC: | 19741 |
UniProt: | Q9NXS3G3V4Y0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.28e-21 | 114 |
hematopoietic system | 1.11e-17 | 98 |
blood island | 1.11e-17 | 98 |
hemolymphoid system | 8.12e-15 | 108 |
neural tube | 4.04e-11 | 56 |
neural rod | 4.04e-11 | 56 |
future spinal cord | 4.04e-11 | 56 |
neural keel | 4.04e-11 | 56 |
bone marrow | 1.05e-10 | 76 |
regional part of nervous system | 2.25e-10 | 53 |
regional part of brain | 2.25e-10 | 53 |
immune system | 4.97e-10 | 93 |
bone element | 7.44e-10 | 82 |
regional part of forebrain | 7.57e-10 | 41 |
forebrain | 7.57e-10 | 41 |
anterior neural tube | 7.57e-10 | 41 |
future forebrain | 7.57e-10 | 41 |
central nervous system | 9.09e-10 | 81 |
nervous system | 3.00e-09 | 89 |
skeletal element | 1.65e-08 | 90 |
telencephalon | 4.65e-08 | 34 |
brain | 5.95e-08 | 68 |
future brain | 5.95e-08 | 68 |
brain grey matter | 7.67e-08 | 34 |
gray matter | 7.67e-08 | 34 |
cerebral hemisphere | 1.45e-07 | 32 |
regional part of telencephalon | 2.00e-07 | 32 |
blood | 3.50e-07 | 15 |
haemolymphatic fluid | 3.50e-07 | 15 |
organism substance | 3.50e-07 | 15 |
regional part of cerebral cortex | 3.57e-07 | 22 |