FFCP PHASE1:Hg19::chr2:33661382..33661445,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14545 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IV61,Q53SD7 | |||
|association_with_transcript=0bp_to_ENST00000402538,ENST00000484909,NM_170672,uc002row.1,uc002rox.2_5end | |||
|coexpression_cluster_id=C428 | |||
|description=CAGE_peak_3_at_RASGRP3_5end | |||
|id=chr2:33661382..33661445,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.16e-24!24;CL:0000115!1.65e-21!35;CL:0000071!2.46e-18!18;CL:0002546!2.46e-18!18;CL:0002078!1.30e-14!44;CL:1000413!1.56e-09!9;CL:0000213!2.21e-09!57;CL:0000215!2.21e-09!57;CL:0000222!4.48e-09!119;CL:0005020!6.82e-08!6;CL:0002138!6.82e-08!6;CL:0005022!6.82e-08!6;CL:0002543!3.00e-07!6;CL:0002544!6.40e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.91e-34;24!CL:0000115;4.30e-26;36!CL:0000071;4.22e-25;18!CL:0002078;1.67e-14;45!CL:1000413;9.42e-13;9!CL:0002138;1.76e-10;6!CL:0000213;5.25e-10;58!CL:0000215;5.25e-10;58!CL:0002543;1.59e-09;6!CL:0002544;4.47e-09;6!CL:0002539;1.76e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.11e-34,24;CL:0000115,7.35e-31,36;CL:0000071,3.50e-25,18;CL:0002546,3.50e-25,18;CL:0002078,1.60e-22,45;CL:0000213,3.43e-15,58;CL:0000215,3.43e-15,58;CL:1000413,8.85e-13,9;CL:0000222,1.91e-12,121;CL:0005020,1.78e-10,6;CL:0002138,1.78e-10,6;CL:0005022,1.78e-10,6;CL:0002543,1.43e-09,6;CL:0002544,4.13e-09,6;CL:0002539,1.55e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002546;4.22e-25;18!CL:0005022;1.76e-10;6!UBERON:0004872;4.97e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.01e-36!115;UBERON:0004111!1.00e-33!241;UBERON:0000025!7.29e-32!194;UBERON:0000477!2.83e-30!286;UBERON:0000055!3.37e-29!69;UBERON:0004872!2.97e-28!84;UBERON:0001981!9.54e-26!60;UBERON:0007500!9.54e-26!60;UBERON:0004537!9.54e-26!60;UBERON:0006965!9.54e-26!60;UBERON:0002049!1.06e-23!79;UBERON:0007798!1.06e-23!79;UBERON:0001009!7.60e-23!113;UBERON:0004535!4.57e-21!110;UBERON:0003914!5.99e-21!118;UBERON:0001986!2.46e-18!18;UBERON:0004638!2.46e-18!18;UBERON:0004852!2.46e-18!18;UBERON:0000483!7.01e-18!309;UBERON:0000119!2.51e-17!312;UBERON:0001637!2.60e-15!42;UBERON:0003509!2.60e-15!42;UBERON:0004572!2.60e-15!42;UBERON:0000487!1.30e-13!22;UBERON:0001049!3.70e-13!57;UBERON:0005068!3.70e-13!57;UBERON:0006241!3.70e-13!57;UBERON:0007135!3.70e-13!57;UBERON:0004573!5.54e-13!33;UBERON:0004571!5.54e-13!33;UBERON:0000468!3.38e-11!659;UBERON:0006914!4.08e-11!25;UBERON:0000467!2.67e-10!625;UBERON:0000480!3.41e-10!626;UBERON:0003080!3.50e-10!42;UBERON:0000481!3.73e-10!347;UBERON:0000947!4.28e-10!21;UBERON:0010191!4.28e-10!21;UBERON:0002616!6.55e-10!59;UBERON:0002780!1.28e-09!41;UBERON:0001890!1.28e-09!41;UBERON:0006240!1.28e-09!41;UBERON:0003915!1.56e-09!9;UBERON:0004700!1.56e-09!9;UBERON:0001917!1.56e-09!9;UBERON:0000955!2.93e-09!69;UBERON:0006238!2.93e-09!69;UBERON:0003075!4.17e-09!86;UBERON:0007284!4.17e-09!86;UBERON:0001017!7.09e-09!82;UBERON:0000490!8.74e-09!138;UBERON:0005743!1.53e-08!86;UBERON:0002346!3.84e-08!90;UBERON:0002020!5.46e-08!34;UBERON:0003528!5.46e-08!34;UBERON:0007100!7.95e-08!27;UBERON:0001893!8.38e-08!34;UBERON:0000073!1.55e-07!94;UBERON:0001016!1.55e-07!94;UBERON:0002791!1.94e-07!33;UBERON:0000922!2.98e-07!612;UBERON:0001869!3.36e-07!32;UBERON:0000475!3.74e-07!365;UBERON:0002619!4.56e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.22e-25;18!UBERON:0001986;4.22e-25;18!UBERON:0004852;4.22e-25;18!UBERON:0000487;2.28e-19;22!UBERON:0006914;2.70e-16;25!UBERON:0000055;7.53e-16;65!UBERON:0007500;3.13e-13;56!UBERON:0001981;3.13e-13;56!UBERON:0004537;3.13e-13;56!UBERON:0004573;3.37e-13;33!UBERON:0004571;3.37e-13;33!UBERON:0003915;9.42e-13;9!UBERON:0004700;9.42e-13;9!UBERON:0001917;9.42e-13;9!UBERON:0001637;9.89e-12;42!UBERON:0003509;9.89e-12;42!UBERON:0004572;9.89e-12;42!UBERON:0000947;1.76e-11;21!UBERON:0010191;1.76e-11;21!UBERON:0007100;1.04e-10;25!UBERON:0002049;2.63e-10;75!UBERON:0007798;2.63e-10;75!UBERON:0000490;4.01e-10;33!UBERON:0003914;3.35e-09;74!UBERON:0002465;3.92e-09;10!UBERON:0001009;2.30e-08;112!UBERON:0000948;3.35e-08;22!UBERON:0001638;8.61e-08;9!UBERON:0003920;8.61e-08;9!UBERON:0004582;8.61e-08;9!UBERON:0004535;1.17e-07;109!UBERON:0001473;1.61e-07;8!UBERON:0004536;1.61e-07;8!UBERON:0006558;1.61e-07;8!UBERON:0004237;1.76e-07;10!UBERON:0004695;1.76e-07;10!UBERON:0002111;1.76e-07;10!UBERON:0004178;1.76e-07;10!UBERON:0000922;3.49e-07;49!UBERON:0003513;6.47e-07;7!UBERON:0001135;7.41e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.45e-33,68;UBERON:0004872,6.70e-33,83;UBERON:0007500,3.16e-28,59;UBERON:0001981,3.16e-28,59;UBERON:0004537,3.16e-28,59;UBERON:0006965,3.16e-28,59;UBERON:0001009,1.42e-27,112;UBERON:0002049,3.32e-27,78;UBERON:0007798,3.32e-27,78;UBERON:0004535,3.43e-25,109;UBERON:0004638,3.50e-25,18;UBERON:0001986,3.50e-25,18;UBERON:0004852,3.50e-25,18;UBERON:0003914,6.38e-25,117;UBERON:0004111,6.04e-24,240;UBERON:0000025,5.63e-21,192;UBERON:0000487,1.97e-19,22;UBERON:0007023,7.10e-19,114;UBERON:0006914,2.38e-16,25;UBERON:0004573,5.21e-14,33;UBERON:0004571,5.21e-14,33;UBERON:0001637,1.56e-13,42;UBERON:0003509,1.56e-13,42;UBERON:0004572,1.56e-13,42;UBERON:0003915,8.85e-13,9;UBERON:0004700,8.85e-13,9;UBERON:0001917,8.85e-13,9;UBERON:0000947,1.25e-11,21;UBERON:0010191,1.25e-11,21;UBERON:0000483,4.10e-11,306;UBERON:0000119,8.61e-11,309;UBERON:0000490,6.34e-10,148;UBERON:0003103,8.97e-10,68;UBERON:0007100,1.66e-09,27;UBERON:0002465,3.92e-09,10;UBERON:0003081,3.06e-08,203;UBERON:0001638,8.07e-08,9;UBERON:0003920,8.07e-08,9;UBERON:0004582,8.07e-08,9;UBERON:0004237,1.55e-07,10;UBERON:0004695,1.55e-07,10;UBERON:0002111,1.55e-07,10;UBERON:0004178,1.55e-07,10;UBERON:0001473,1.62e-07,8;UBERON:0004536,1.62e-07,8;UBERON:0006558,1.62e-07,8;UBERON:0000948,3.45e-07,24;UBERON:0005498,3.45e-07,24;UBERON:0004140,3.45e-07,24;UBERON:0009881,3.45e-07,24;UBERON:0004141,3.45e-07,24;UBERON:0003084,3.45e-07,24;UBERON:0007005,3.45e-07,24;UBERON:0004139,3.45e-07,24;UBERON:0004291,3.45e-07,24;UBERON:0001135,6.13e-07,15;UBERON:0003513,8.76e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4295274896802,4.82155622419182,5.84248072309899,4.87932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,2.04580098949649,0,0,0,0,0,0,0,0,2.61958150995425,0,0,0,0,0,0,0,0,11.9257444420023,8.60234595106124,4.85996702250632,5.08777147731609,11.3264847776675,5.77747888074142,7.31482382878837,34.1110122103514,35.9323925313577,32.8026200509377,47.5338594188793,63.8628568803551,30.7518192510694,28.6777202669778,7.29127753093584,41.6136733803812,17.7378204374674,19.7070090845814,7.66583187329416,7.59412527654503,5.86245580577303,0,0,0,0,0,0.662045904066094,0.573673241497627,0,0,4.2699598291882,0,0.933633106199299,9.29503637280848,7.19232373699218,0,0,0,0,1.1409436430889,0,0.704606991862589,0.485618833104395,0.702254033511242,2.85815839756851,1.22834317311768,0.413303124703062,0,0,0,0,2.02003336744879,0.375355559615893,1.93944880838928,0,0,0,0.680593098960126,0.717558542755448,0,0,0,0.103052529238439,0,0,0,0,0,0.184099797284599,0,0,0.10075209822764,0,0,0,0,0,0,0.813357600086629,0.207322110030741,0.504641701751257,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,30.2643736396106,7.01208869017229,0,0,2.53510069643662,0,12.4065880403095,0,0,0,0,0,0,0,0,0,0,0,0,39.9895060298174,30.5570438300563,35.1970181634007,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0,0.380987365753014,0,0,0,0,0,0,0,0,0,0,0,3.381211010224,0,0,0,0,0,0.142977993658148,0,0,4.23457039581856,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364182336013434,0,0,0,0,0,0,11.3733384070897,15.818714590716,14.6822822949455,0,0,0,0,0,0,0,0.261435451024901,0,0,0,7.62503486193145,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,2.7881490806424,11.0892088863392,1.06461206063404,1.73986598415015,4.07713282028624,2.28999818787186,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0,1.2130948894399,0,0,0,6.33655073041339,1.05650146756755,0,0,0,0,2.65375590096488,7.0152141640602,0,0,0.608731130888112,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0.379473173765715,0,0,0,0,4.9896214411693,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0.5745161103971,2.54008299268659,0,0.561594356226918,0,0,0,1.69291777801603,0,0,0,0,0,0,0,0,0,0,9.46594874665941,0,0,0,6.73937624650712,0,0,0,0,0,0,0,0.562677665642051,0,0,0,1.9924798825107,1.38141957765574,0,0,0,0,0,0.179021174675609,0,4.83352687620975,0,0,0.969332746095218,0.185536196323703,0,0,0,3.62499787717397,0,0,0,0.344743373241465,0,0,0,0.241192877250816,1.52581736317083,1.3269511191747,0,0,0,0,2.30850775511391,0,0,0,0,0.638002319463839,0,1.5991043280559,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0.995261931078505,2.4768118060935,5.49927130440263,0,0,0,0.404406797884062,24.0773294189637,0.234264445725339,0,0,0,0.394584402849391,6.04953580243319,1.22429104652196,4.48624715362264,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,3.10364852762942,0,2.71176888936639,0,0,0.126621591911757,0,0,2.56143593687223,0,0,0,0,0,0,0,3.94122197613481,4.28871669880566,0,0,0.600420288709789,0.821432273351958,0,0,0,6.98206003180636,6.87481272035051,11.485968393229,2.1964690054889,3.43380838509257,6.4719722658143,13.3695110248585,0,0,0,0,0,0,0,1.59045937961861,1.63444087333891,0,0,0,0,0,0.485996453264197,0,1.73372556058236,6.92400563381975,0,0.179287339332845,0,14.2939065274673,7.28301167401975,0,0,0,0,0,0.082092520749339,0,0,4.68967147769864,6.62534444561107,0.904980694530854,1.71902382265497,0,0,2.34932307648928,15.2488175946676,2.48543433208317,2.48083010905975,0,0,0,2.1760712134779,8.5234563967718,1.53172788381731,0.983617892129413,0,0.886068179966986,0.610131324509816,0.876336514945499,0.573409195690071,1.44207766997908,0.683060432355218,0,0,0.758245587708239,0,0,0,0,0,0,0,0,0,0,0,0,0,7.09704719950243,0.477890301491107,0.899606224327209,1.39736661188633,0,0.53168342911599,0,0,0,0,1.81848659202559,0.107410557042488,0,0,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,1.24432592536558,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.706521476061055,0,1.75597244962866,0.41023272848151,1.00828678488687,0,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,1.27857558193737,0,3.90757005616546,0,0,0,0.742913430802341,0,0.826747186004736,0.570742291745161,1.09394961803644,0,1.98484471355718,0,0,0.535701835878287,2.01770233331294,0.606965604236632,1.59363533945908,4.25771376780666,0,0,1.63127359144396,0.394636641377094,0,0,3.53218917827313,0,0,6.39211104356647,0,0,2.71610867871294,0,0,0,0,0,0,0,0.860454717640555,0,0,1.27016115057279,0,0,0.955538938977433,0,0,0,0,1.1292908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| |||
|short_description=p3@RASGRP3 | |||
}} |
Revision as of 02:32, 21 January 2014
Short description: | p3@RASGRP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RASGRP3_5end |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | 0bp_to_ENST00000402538, ENST00000484909, NM_170672, uc002row.1, uc002rox.2_5end |
EntrezGene: | RASGRP3 |
HGNC: | 14545 |
UniProt: | Q8IV61Q53SD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.11e-34 | 24 |
endothelial cell | 7.35e-31 | 36 |
blood vessel endothelial cell | 3.50e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.50e-25 | 18 |
meso-epithelial cell | 1.60e-22 | 45 |
lining cell | 3.43e-15 | 58 |
barrier cell | 3.43e-15 | 58 |
endothelial cell of artery | 8.85e-13 | 9 |
mesodermal cell | 1.91e-12 | 121 |
lymphangioblast | 1.78e-10 | 6 |
endothelial cell of lymphatic vessel | 1.78e-10 | 6 |
vascular lymphangioblast | 1.78e-10 | 6 |
vein endothelial cell | 1.43e-09 | 6 |
aortic endothelial cell | 4.13e-09 | 6 |
aortic smooth muscle cell | 1.55e-07 | 10 |