FFCP PHASE1:Hg19::chr22:27622736..27622761,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc003adh.2_5end | |||
|coexpression_cluster_id=C2641 | |||
|description=CAGE_peak_2_at_uc003adh.2_5end | |||
|id=chr22:27622736..27622761,- | |||
|ontology_enrichment_celltype=CL:0000077!1.54e-27!19;CL:0000057!2.13e-11!75;CL:0002334!1.02e-10!12;CL:0000055!1.73e-09!180;CL:0000144!3.74e-09!625;CL:0002620!4.57e-08!23;CL:0000213!8.42e-08!57;CL:0000215!8.42e-08!57;CL:0000548!1.96e-07!679;CL:0000004!1.96e-07!679;CL:0000255!1.96e-07!679;CL:0000012!2.75e-07!682;CL:0000349!4.12e-07!3;CL:0002577!4.12e-07!3;CL:0000174!5.12e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.04e-45;19!CL:0002097;9.49e-14;2!CL:0000174;1.84e-09;3!CL:0002577;2.18e-09;3!CL:0000511;1.68e-07;1!CL:0002625;1.68e-07;1!CL:0000222;1.68e-07;1!CL:0002581;1.68e-07;1!CL:0000216;1.68e-07;1!CL:0000213;3.93e-07;58!CL:0000215;3.93e-07;58!CL:0000306;4.33e-07;4!CL:0002222;4.33e-07;4!CL:0002224;4.33e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,7.54e-46,19;CL:0000213,6.45e-16,58;CL:0000215,6.45e-16,58;CL:0002097,1.35e-13,2;CL:0000076,3.14e-12,63;CL:0002577,1.66e-09,3;CL:0000174,2.33e-09,3;CL:0000511,1.15e-07,1;CL:0002625,1.15e-07,1;CL:0000216,1.15e-07,1;CL:0002581,1.22e-07,1;CL:0000222,1.83e-07,121;CL:0000306,4.34e-07,4;CL:0002222,4.34e-07,4;CL:0002224,4.34e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.86e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.78e-16;14!DOID:120;5.19e-08;27!DOID:193;2.03e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.98e-16,14;DOID:120,5.69e-08,27;DOID:193,2.21e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0007625!1.67e-09!11;UBERON:0000488!1.31e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;6.16e-12;5!UBERON:0002369;1.84e-09;3!UBERON:0001235;1.84e-09;3!UBERON:0006858;1.84e-09;3!UBERON:0001280;3.53e-09;3!UBERON:0004647;3.53e-09;3!UBERON:0001136;1.68e-07;1!UBERON:0001343;1.68e-07;1!UBERON:0001282;1.68e-07;1!UBERON:0009842;1.68e-07;1!UBERON:0003704;1.68e-07;1!UBERON:0004910;1.68e-07;1!UBERON:0004813;1.68e-07;1!UBERON:0001171;1.68e-07;1!UBERON:0001172;1.68e-07;1!UBERON:0001987;3.03e-07;4!UBERON:0010077;4.33e-07;4!UBERON:0005389;4.33e-07;4!UBERON:0000484;4.33e-07;4!UBERON:0000965;4.33e-07;4!UBERON:0001803;4.33e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,8.18e-12,5;UBERON:0002369,2.33e-09,3;UBERON:0001235,2.33e-09,3;UBERON:0006858,2.33e-09,3;UBERON:0001280,4.35e-09,3;UBERON:0004647,4.35e-09,3;UBERON:0005171,4.35e-09,3;UBERON:0001136,1.15e-07,1;UBERON:0001343,1.15e-07,1;UBERON:0004910,1.15e-07,1;UBERON:0005154,1.15e-07,1;UBERON:0005295,1.15e-07,1;UBERON:0004813,1.15e-07,1;UBERON:0005297,1.15e-07,1;UBERON:0005294,1.15e-07,1;UBERON:0010141,1.15e-07,1;UBERON:0005891,1.15e-07,1;UBERON:0001987,2.47e-07,4;UBERON:0004340,2.47e-07,4;UBERON:0001282,2.63e-07,1;UBERON:0009842,2.63e-07,1;UBERON:0003704,2.63e-07,1;UBERON:0001171,2.63e-07,1;UBERON:0001172,2.63e-07,1;UBERON:0010077,4.34e-07,4;UBERON:0005389,4.34e-07,4;UBERON:0000484,4.34e-07,4;UBERON:0002546,4.34e-07,4;UBERON:0000965,4.34e-07,4;UBERON:0001803,4.34e-07,4;UBERON:0003073,4.34e-07,4;UBERON:0005426,4.34e-07,4 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0.0945348171640679,0.665188192387692,0.966182642624386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0.74000264525148,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0.358779271377724,0,0,0.300091096084402,0.206105058476878,0.257640540045629,0.744467425326359,0.337552664482532,0.68205903612839,0.504867548488229,0.368199594569197,0.161646056818812,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,5.72734816413214,5.22920075160176,6.99810938274399,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.368738337083406,0,0,0,0,0,0,0.909382714338778,1.66435439510497,2.41912234663744,0.992431231275107,0.306923946576125,0.280660094433074,0.640695746278505,1.02341449813341,0.482561763430822,1.48418066444991,0.154209693802656,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0.165018999841176,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.571890581771475,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.430234056612155,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43176155503017,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.480952921509202,0,0,0,0,0,0,0,0,0.271808412147228,0.418411385249333,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0.79318464064088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0.149254802886874,0.467426619694449,0,0,0,0,0,0.151230923763239,0.466311601748341,0,0.63718706865481,0,0.621051827505038,0,3.19010057469594,0.521745061811734,3.45592500693602,2.66563648518157,1.22061219961398,0,4.08160116761456,0,1.19428766609585,0,0,0.673498977531838,1.26184898228651,1.15571898244382,4.93215660162329,1.82696004375648,1.36023555307363,0.463044948647668,1.95789363605174,9.49170857731883,0.617602894321944,1.09642024789354,0,0.578742114812744,0.337884881306145,0,0.345430341731199,1.21543982470953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90691047733584,0,0,0,12.5057142596182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857440047187092,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@uc003adh.2 | |||
}} |
Revision as of 15:05, 21 January 2014
Short description: | p2@uc003adh.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc003adh.2_5end |
Coexpression cluster: | C2641_mesothelioma_pagetoid_Mesothelial_Placental_mesenchymal_astrocytoma_lens |
Association with transcript: | 0bp_to_uc003adh.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 7.54e-46 | 19 |
lining cell | 6.45e-16 | 58 |
barrier cell | 6.45e-16 | 58 |
cortical cell of adrenal gland | 1.35e-13 | 2 |
squamous epithelial cell | 3.14e-12 | 63 |
placental epithelial cell | 1.66e-09 | 3 |
steroid hormone secreting cell | 2.33e-09 | 3 |
androgen binding protein secreting cell | 1.15e-07 | 1 |
seminiferous tubule epithelial cell | 1.15e-07 | 1 |
Sertoli cell | 1.15e-07 | 1 |
perirenal preadipocyte | 1.22e-07 | 1 |
mesodermal cell | 1.83e-07 | 121 |
crystallin accumulating cell | 4.34e-07 | 4 |
vertebrate lens cell | 4.34e-07 | 4 |
lens epithelial cell | 4.34e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
right ovary | 8.18e-12 | 5 |
adrenal gland | 2.33e-09 | 3 |
adrenal cortex | 2.33e-09 | 3 |
adrenal/interrenal gland | 2.33e-09 | 3 |
liver parenchyma | 4.35e-09 | 3 |
liver lobule | 4.35e-09 | 3 |
hepatic duct | 4.35e-09 | 3 |
mesothelium | 1.15e-07 | 1 |
seminiferous tubule of testis | 1.15e-07 | 1 |
epithelium of male gonad | 1.15e-07 | 1 |
epithelial cord | 1.15e-07 | 1 |
sex cord | 1.15e-07 | 1 |
seminiferous tubule epithelium | 1.15e-07 | 1 |
testis sex cord | 1.15e-07 | 1 |
genital ridge | 1.15e-07 | 1 |
primitive sex cord of indifferent gonad | 1.15e-07 | 1 |
coelomic epithelium | 1.15e-07 | 1 |
placenta | 2.47e-07 | 4 |
allantois | 2.47e-07 | 4 |
intralobular bile duct | 2.63e-07 | 1 |
acinus | 2.63e-07 | 1 |
intrahepatic bile duct | 2.63e-07 | 1 |
portal lobule | 2.63e-07 | 1 |
hepatic acinus | 2.63e-07 | 1 |
cuboidal epithelium | 4.34e-07 | 4 |
transparent eye structure | 4.34e-07 | 4 |
simple cuboidal epithelium | 4.34e-07 | 4 |
cranial placode | 4.34e-07 | 4 |
lens of camera-type eye | 4.34e-07 | 4 |
epithelium of lens | 4.34e-07 | 4 |
lens placode | 4.34e-07 | 4 |
lens vesicle | 4.34e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.98e-16 | 14 |
female reproductive organ cancer | 5.69e-08 | 27 |
reproductive organ cancer | 2.21e-07 | 29 |