FFCP PHASE1:Hg19::chr3:15935709..15935731,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=117248 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=21531 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=140bp_to_uc003caq.3_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_16_at_GALNTL2_5end | |||
|id=chr3:15935709..15935731,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;2.78e-26;1!UBERON:0008814;1.14e-13;2!UBERON:0010056;1.14e-13;2 | |||
|ontology_enrichment_disease=DOID:114!2.26e-13!2;DOID:178!1.36e-07!1;DOID:326!1.36e-07!1;DOID:3978!1.36e-07!1;DOID:3394!1.36e-07!1;DOID:5844!1.36e-07!1;DOID:6193!3.85e-07!1;DOID:1287!4.22e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:178;6.72e-26;1!DOID:326;6.72e-26;1!DOID:3978;6.72e-26;1!DOID:3394;6.72e-26;1!DOID:5844;6.72e-26;1!DOID:114;1.14e-13;2!DOID:0060084;1.47e-09;3!DOID:127;1.47e-09;3!DOID:0060072;1.75e-07;4!DOID:1287;1.75e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:178,7.62e-26,1;DOID:326,7.62e-26,1;DOID:3978,7.62e-26,1;DOID:3394,7.62e-26,1;DOID:5844,7.62e-26,1;DOID:114,1.21e-13,2;DOID:0060084,1.81e-09,3;DOID:127,1.81e-09,3;DOID:1287,1.80e-07,4;DOID:0060072,2.04e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.24e-27!115;UBERON:0000369!9.68e-24!4;UBERON:0002435!9.68e-24!4;UBERON:0000204!9.68e-24!4;UBERON:0010082!9.68e-24!4;UBERON:0005383!1.47e-18!3;UBERON:0005382!1.47e-18!3;UBERON:0002420!3.25e-16!9;UBERON:0007245!3.25e-16!9;UBERON:0010009!3.25e-16!9;UBERON:0010011!3.25e-16!9;UBERON:0000454!3.25e-16!9;UBERON:0001042!6.47e-15!10;UBERON:0009145!6.47e-15!10;UBERON:0002780!1.25e-14!41;UBERON:0001890!1.25e-14!41;UBERON:0006240!1.25e-14!41;UBERON:0003080!3.05e-14!42;UBERON:0009663!1.17e-13!7;UBERON:0006562!1.53e-13!11;UBERON:0001873!6.32e-13!2;UBERON:0010122!6.32e-13!2;UBERON:0001897!9.05e-13!2;UBERON:0001049!4.92e-12!57;UBERON:0005068!4.92e-12!57;UBERON:0006241!4.92e-12!57;UBERON:0007135!4.92e-12!57;UBERON:0002616!1.47e-11!59;UBERON:0000153!1.09e-10!129;UBERON:0007811!1.09e-10!129;UBERON:0002308!1.18e-10!9;UBERON:0000125!1.18e-10!9;UBERON:0001869!4.92e-10!32;UBERON:0008814!5.96e-10!15;UBERON:0002791!1.05e-09!33;UBERON:0000955!2.02e-09!69;UBERON:0006238!2.02e-09!69;UBERON:0002020!2.14e-09!34;UBERON:0003528!2.14e-09!34;UBERON:0001893!2.14e-09!34;UBERON:0001723!2.32e-09!3;UBERON:0001033!2.32e-09!3;UBERON:0010056!2.32e-09!3;UBERON:0003056!2.88e-09!61;UBERON:0003075!1.09e-08!86;UBERON:0007284!1.09e-08!86;UBERON:0002346!3.37e-08!90;UBERON:0001894!3.93e-08!7;UBERON:0006222!3.93e-08!7;UBERON:0001557!9.76e-08!19;UBERON:0002084!1.06e-07!1;UBERON:0002082!1.06e-07!1;UBERON:0004706!1.06e-07!1;UBERON:0001017!1.27e-07!82;UBERON:0005418!1.27e-07!1;UBERON:0001389!1.27e-07!1;UBERON:0000026!1.27e-07!1;UBERON:0008784!1.27e-07!1;UBERON:0006058!1.27e-07!1;UBERON:0003663!1.27e-07!1;UBERON:0001383!1.27e-07!1;UBERON:0004256!1.27e-07!1;UBERON:0002529!1.27e-07!1;UBERON:0004708!1.27e-07!1;UBERON:0002101!1.27e-07!1;UBERON:0004709!1.27e-07!1;UBERON:0003661!1.27e-07!1;UBERON:0002471!1.27e-07!1;UBERON:0004357!1.27e-07!1;UBERON:0009872!1.27e-07!1;UBERON:0004347!1.27e-07!1;UBERON:0005420!1.27e-07!1;UBERON:0005732!1.27e-07!1;UBERON:0006057!1.27e-07!1;UBERON:0000978!1.27e-07!1;UBERON:0002103!1.27e-07!1;UBERON:0001665!1.27e-07!1;UBERON:0003823!1.27e-07!1;UBERON:0000154!1.27e-07!1;UBERON:0005733!1.27e-07!1;UBERON:0005730!1.27e-07!1;UBERON:0000073!1.63e-07!94;UBERON:0001016!1.63e-07!94;UBERON:0000033!1.95e-07!123;UBERON:0007029!2.23e-07!1;UBERON:0001874!2.37e-07!1;UBERON:0002146!2.52e-07!1;UBERON:0005623!2.52e-07!1;UBERON:0004121!2.96e-07!169;UBERON:0005743!3.54e-07!86;UBERON:0000924!5.20e-07!173;UBERON:0006601!5.20e-07!173;UBERON:0002372!5.84e-07!1;UBERON:0001961!5.84e-07!1;UBERON:0001744!5.84e-07!1;UBERON:0001735!5.84e-07!1;UBERON:0001882!6.57e-07!1;UBERON:0005403!6.57e-07!1;UBERON:0002370!7.00e-07!4;UBERON:0005058!7.00e-07!4;UBERON:0009113!7.00e-07!4;UBERON:0003295!7.00e-07!4;UBERON:0005562!7.00e-07!4;UBERON:0002022!7.40e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;5.06e-34;3!UBERON:0001033;5.06e-34;3!UBERON:0002084;2.78e-26;1!UBERON:0002082;2.78e-26;1!UBERON:0001389;6.72e-26;1!UBERON:0000026;6.72e-26;1!UBERON:0008784;6.72e-26;1!UBERON:0006058;6.72e-26;1!UBERON:0003663;6.72e-26;1!UBERON:0004256;6.72e-26;1!UBERON:0004708;6.72e-26;1!UBERON:0002101;6.72e-26;1!UBERON:0004709;6.72e-26;1!UBERON:0002529;6.72e-26;1!UBERON:0010538;6.72e-26;1!UBERON:0003661;6.72e-26;1!UBERON:0010890;6.72e-26;1!UBERON:0002471;6.72e-26;1!UBERON:0001383;6.72e-26;1!UBERON:0010758;6.72e-26;1!UBERON:0010707;6.72e-26;1!UBERON:0000978;6.72e-26;1!UBERON:0002103;6.72e-26;1!UBERON:0001665;6.72e-26;1!UBERON:0003823;6.72e-26;1!UBERON:0000154;6.72e-26;1!UBERON:0010709;6.72e-26;1!UBERON:0002370;1.14e-13;2!UBERON:0005090;1.14e-13;2!UBERON:0001630;1.14e-13;2!UBERON:0005058;1.14e-13;2!UBERON:0009113;1.14e-13;2!UBERON:0004151;1.10e-09;3!UBERON:0001134;3.90e-07;16!UBERON:0002036;3.90e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,6.51e-34,3;UBERON:0001033,6.51e-34,3;UBERON:0010056,6.51e-34,3;UBERON:0002084,2.78e-26,1;UBERON:0002082,2.78e-26,1;UBERON:0010226,2.78e-26,1;UBERON:0005418,5.93e-26,1;UBERON:0001389,5.93e-26,1;UBERON:0000026,5.93e-26,1;UBERON:0008784,5.93e-26,1;UBERON:0006058,5.93e-26,1;UBERON:0003663,5.93e-26,1;UBERON:0004256,5.93e-26,1;UBERON:0004708,5.93e-26,1;UBERON:0002101,5.93e-26,1;UBERON:0004709,5.93e-26,1;UBERON:0002529,5.93e-26,1;UBERON:0010538,5.93e-26,1;UBERON:0003661,5.93e-26,1;UBERON:0010890,5.93e-26,1;UBERON:0002471,5.93e-26,1;UBERON:0001383,5.93e-26,1;UBERON:0004357,5.93e-26,1;UBERON:0004347,5.93e-26,1;UBERON:0005420,5.93e-26,1;UBERON:0005732,5.93e-26,1;UBERON:0010758,5.93e-26,1;UBERON:0010707,5.93e-26,1;UBERON:0000978,5.93e-26,1;UBERON:0002103,5.93e-26,1;UBERON:0001665,5.93e-26,1;UBERON:0003823,5.93e-26,1;UBERON:0000154,5.93e-26,1;UBERON:0010709,5.93e-26,1;UBERON:0005733,5.93e-26,1;UBERON:0005730,5.93e-26,1;UBERON:0001042,5.13e-23,10;UBERON:0009145,5.13e-23,10;UBERON:0006562,5.33e-21,11;UBERON:0005090,1.07e-13,2;UBERON:0001630,1.07e-13,2;UBERON:0008814,3.93e-13,18;UBERON:0001557,1.77e-12,19;UBERON:0004151,1.10e-09,3;UBERON:0002370,1.49e-07,4;UBERON:0005058,1.49e-07,4;UBERON:0009113,1.49e-07,4;UBERON:0003295,1.49e-07,4;UBERON:0005562,1.49e-07,4 | |||
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|short_description=p16@GALNTL2 | |||
}} |
Revision as of 17:41, 21 January 2014
Short description: | p16@GALNTL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_GALNTL2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 140bp_to_uc003caq.3_5end |
EntrezGene: | GALNTL2 |
HGNC: | 21531 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular disease | 7.62e-26 | 1 |
ischemia | 7.62e-26 | 1 |
extrinsic cardiomyopathy | 7.62e-26 | 1 |
myocardial ischemia | 7.62e-26 | 1 |
myocardial infarction | 7.62e-26 | 1 |
heart disease | 1.21e-13 | 2 |
cell type benign neoplasm | 1.81e-09 | 3 |
leiomyoma | 1.81e-09 | 3 |
cardiovascular system disease | 1.80e-07 | 4 |
benign neoplasm | 2.04e-07 | 4 |