FFCP PHASE1:Hg19::chr3:150421752..150421771,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=131831 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28602 | |||
|TSSclassifier=strong | |||
|UniProt=C9J7L7 | |||
|association_with_transcript=0bp_to_ENST00000498386_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_FAM194A_5end | |||
|id=chr3:150421752..150421771,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002592;1.71e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,1.83e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.30e-40;1!UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10!UBERON:0003056;2.09e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.37e-20!57;UBERON:0005068!5.37e-20!57;UBERON:0006241!5.37e-20!57;UBERON:0007135!5.37e-20!57;UBERON:0002780!1.17e-19!41;UBERON:0001890!1.17e-19!41;UBERON:0006240!1.17e-19!41;UBERON:0003080!4.37e-19!42;UBERON:0002616!3.09e-17!59;UBERON:0001893!8.42e-17!34;UBERON:0007023!6.82e-16!115;UBERON:0002346!9.63e-16!90;UBERON:0001869!1.05e-15!32;UBERON:0002791!2.85e-15!33;UBERON:0002020!9.91e-15!34;UBERON:0003528!9.91e-15!34;UBERON:0000073!2.08e-14!94;UBERON:0001016!2.08e-14!94;UBERON:0003075!6.20e-14!86;UBERON:0007284!6.20e-14!86;UBERON:0000955!1.08e-13!69;UBERON:0006238!1.08e-13!69;UBERON:0001017!2.51e-13!82;UBERON:0005743!1.90e-12!86;UBERON:0003056!9.16e-12!61;UBERON:0002420!1.57e-11!9;UBERON:0007245!1.57e-11!9;UBERON:0010009!1.57e-11!9;UBERON:0010011!1.57e-11!9;UBERON:0000454!1.57e-11!9;UBERON:0009663!9.80e-11!7;UBERON:0002619!4.13e-10!22;UBERON:0001950!4.43e-09!20;UBERON:0000956!1.02e-08!25;UBERON:0000203!1.02e-08!25;UBERON:0002308!2.94e-08!9;UBERON:0000125!2.94e-08!9;UBERON:0000153!5.32e-08!129;UBERON:0007811!5.32e-08!129;UBERON:0000369!9.63e-08!4;UBERON:0002435!9.63e-08!4;UBERON:0000204!9.63e-08!4;UBERON:0010082!9.63e-08!4;UBERON:0000924!1.24e-07!173;UBERON:0006601!1.24e-07!173;UBERON:0000200!2.00e-07!6;UBERON:0000033!5.01e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.30e-40;1!UBERON:0001785;3.30e-40;1!UBERON:0002464;3.30e-40;1!UBERON:0004904;3.30e-40;1!UBERON:0001021;3.30e-40;1!UBERON:0000473;6.64e-21;8!UBERON:0003714;6.96e-21;2!UBERON:0005162;6.96e-21;2!UBERON:0000122;6.96e-21;2!UBERON:0003135;1.62e-15;11!UBERON:0003498;1.71e-14;3!UBERON:0005985;1.71e-14;3!UBERON:0001621;1.71e-14;3!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.30e-40,1;UBERON:0001785,3.30e-40,1;UBERON:0002464,3.30e-40,1;UBERON:0004904,3.30e-40,1;UBERON:0001021,3.30e-40,1;UBERON:0003902,3.30e-40,1;UBERON:0005425,3.30e-40,1;UBERON:0000473,6.64e-21,8;UBERON:0003714,6.96e-21,2;UBERON:0005162,6.96e-21,2;UBERON:0000122,6.96e-21,2;UBERON:0003135,1.62e-15,11;UBERON:0001621,1.83e-14,3;UBERON:0001781,3.79e-11,4;UBERON:0003498,3.22e-09,5;UBERON:0005985,3.22e-09,5;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0000966,7.25e-08,6;UBERON:0005388,7.25e-08,6;UBERON:0001802,7.25e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0.651844533267181,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,3.47094550068939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17020642346017,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.138314504928436,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.131545547125698,0,0,0.078493092850514,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,7.04741893429626,26.2604847553055,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@FAM194A | |||
}} |
Revision as of 22:01, 21 January 2014
Short description: | p2@FAM194A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM194A_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000498386_5end |
EntrezGene: | FAM194A |
HGNC: | 28602 |
UniProt: | C9J7L7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 1.83e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.30e-40 | 1 |
cranial nerve | 3.30e-40 | 1 |
nerve trunk | 3.30e-40 | 1 |
nerve connecting eye with brain | 3.30e-40 | 1 |
nerve | 3.30e-40 | 1 |
retinal neural layer | 3.30e-40 | 1 |
presumptive neural retina | 3.30e-40 | 1 |
testis | 6.64e-21 | 8 |
neural tissue | 6.96e-21 | 2 |
multi cell component structure | 6.96e-21 | 2 |
neuron projection bundle | 6.96e-21 | 2 |
male reproductive organ | 1.62e-15 | 11 |
coronary artery | 1.83e-14 | 3 |
layer of retina | 3.79e-11 | 4 |
heart blood vessel | 3.22e-09 | 5 |
coronary vessel | 3.22e-09 | 5 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
retina | 7.25e-08 | 6 |
photoreceptor array | 7.25e-08 | 6 |
posterior segment of eyeball | 7.25e-08 | 6 |