FFCP PHASE1:Hg19::chr6:10415263..10415274,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7020 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11742 | |||
|TSSclassifier=strong | |||
|UniProt=C9JXZ2 | |||
|association_with_transcript=-30bp_to_ENST00000498450_5end | |||
|coexpression_cluster_id=C2835 | |||
|description=CAGE_peak_8_at_TFAP2A_5end | |||
|id=chr6:10415263..10415274,- | |||
|ontology_enrichment_celltype=CL:0000066!1.72e-48!254;CL:0002077!2.24e-15!33;CL:0000076!1.39e-14!62;CL:0002076!1.33e-13!43;CL:0000220!6.33e-13!246;CL:0002321!1.49e-12!248;CL:0000077!3.14e-10!19;CL:0000075!4.91e-10!27;CL:0000710!6.33e-09!20;CL:0000223!9.12e-09!59;CL:0000148!9.44e-09!10;CL:0000541!9.44e-09!10;CL:0002251!4.20e-08!21;CL:0002159!5.23e-08!13;CL:0000150!1.10e-07!9;CL:0000221!6.58e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002077;5.76e-14;34!CL:0002076;4.21e-12;42!CL:0002159;3.19e-11;14!CL:0000077;1.73e-10;19!CL:0000150;8.58e-10;9!CL:0002368;1.00e-09;13!CL:0000075;1.75e-08;27!CL:0000622;5.31e-08;5!CL:0000240;5.50e-08;6!CL:0000311;5.50e-08;6!CL:0000079;5.50e-08;6!CL:0000237;5.50e-08;6!CL:0000148;6.95e-08;10!CL:0002251;1.32e-07;20!CL:0000362;1.50e-07;9!CL:0000312;3.23e-07;5!CL:0000710;7.65e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.36e-47,253;CL:0002077,4.56e-16,34;CL:0002076,7.98e-16,42;CL:0000076,5.45e-13,63;CL:0002159,2.75e-11,14;CL:0002321,3.27e-10,250;CL:0000223,3.37e-10,58;CL:0000077,4.25e-10,19;CL:0002368,7.13e-10,13;CL:0000150,1.00e-09,9;CL:0000075,9.74e-09,27;CL:0000240,3.48e-08,6;CL:0000311,3.48e-08,6;CL:0000079,3.48e-08,6;CL:0000237,3.48e-08,6;CL:0000036,3.48e-08,6;CL:0000357,3.48e-08,6;CL:0000114,3.48e-08,6;CL:0000622,3.56e-08,5;CL:0000148,7.19e-08,10;CL:0000541,7.19e-08,10;CL:0002251,1.15e-07,20;CL:0000362,1.29e-07,9;CL:0000312,2.65e-07,5;CL:0000710,5.04e-07,20;CL:0000221,7.04e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.91e-09;29!CL:0000357;5.50e-08;6!CL:0000114;5.50e-08;6 | |||
|ontology_enrichment_disease=DOID:0050687!4.98e-20!143;DOID:305!1.79e-17!106;DOID:162!1.31e-11!235;DOID:14566!4.30e-11!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.30e-13,106;DOID:0050687,5.16e-13,143;DOID:162,1.05e-08,235;DOID:14566,3.45e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.77e-13!72;UBERON:0000065!8.04e-11!53;UBERON:0003102!3.77e-10!95;UBERON:0008947!4.38e-10!38;UBERON:0003258!4.38e-10!38;UBERON:0000072!6.95e-10!46;UBERON:0004119!9.58e-10!169;UBERON:0000925!9.58e-10!169;UBERON:0006595!9.58e-10!169;UBERON:0005631!5.47e-09!14;UBERON:0000158!5.47e-09!14;UBERON:0001737!1.30e-08!9;UBERON:0002097!4.27e-08!40;UBERON:0000077!3.85e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.94e-12;9!UBERON:0001557;1.94e-12;9!UBERON:0000065;5.49e-12;44!UBERON:0000072;9.09e-12;37!UBERON:0001004;9.73e-09;65!UBERON:0004807;4.20e-08;22!UBERON:0001003;4.56e-08;15!UBERON:0007376;4.56e-08;15!UBERON:0000486;2.01e-07;12!UBERON:0005631;2.53e-07;10!UBERON:0000158;2.53e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,5.07e-17,74;UBERON:0000065,3.33e-13,54;UBERON:0008947,8.53e-13,38;UBERON:0003258,8.53e-13,38;UBERON:0001737,1.15e-12,9;UBERON:0000072,3.58e-11,47;UBERON:0004119,1.06e-10,160;UBERON:0000925,1.06e-10,160;UBERON:0006595,1.06e-10,160;UBERON:0003102,1.25e-09,99;UBERON:0005631,3.12e-09,14;UBERON:0000158,3.12e-09,14;UBERON:0001003,3.54e-08,15;UBERON:0007376,3.54e-08,15;UBERON:0007383,3.54e-08,15;UBERON:0001041,1.24e-07,87;UBERON:0001557,3.47e-07,19;UBERON:0002097,6.88e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,4.58726881473362,3.16520373874144,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,6.43594857135249,3.614471025339,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,7.28590576585084,4.82019775619758,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0.550236083880135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,1.3082821564276,0,0.25326102332916,0.794455084879313,0.573673241497627,0,0,2.1349799145941,0.98667019366864,0,0.134710672069688,0,0,0,0.234321431833797,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0.505008341862199,0.375355559615893,1.10825646193673,0,0,0,0,0.538168907066586,0.427114777637135,0.211931901159562,1.20036438433761,0.618315175430633,1.54584324027377,0.558350568994769,1.85653965465393,1.07180705677318,1.51460264546469,0,1.2931684545505,0,0.201504196455281,1.3564847384839,2.31913023795956,4.90943017063502,4.58887352622406,0,0,0.464775771478074,0.621966330092223,0.756962552626885,0,0,0,1.38134921352481,0,0,3.19428360107579,4.72037132218685,4.57920956778616,3.97058301836618,5.01122721412534,4.98268300133303,3.37078270400411,2.5508790466295,1.92373578473195,0,0,0,0,0,0,0,0,0.122988438543114,0,5.5972645558399,3.37205259772859,1.91005047582099,1.85176890317059,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,3.35964256397719,2.41017665312057,3.85101647622248,2.61570544662566,3.06706143332169,0,0,0,0.144119953416961,0.12624243342638,9.71517782670186,15.2795370223311,23.4434894420094,10.2643467613623,6.06682206949609,5.40617504119051,17.1495859578347,0,0,0,0.646358578788889,0,0,1.32969058292435,2.08014873822732,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.699810938274399,0,0,0,0.718874566474748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87173775377726,0.892144943985809,1.57702415033935,1.7571212248907,0,0,0,0,0,0.695068915744663,0,0,0,0,0,0.303127571446259,3.32870879020994,3.0239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,2.20557117333613,1.93370076765382,0,0,0,2.70719767744447,1.23224539367064,0,1.46139224653261,0.422206515571503,0,0,0,0,0,0.501689773854853,1.52925763827023,3.3243040357149,1.79099803777743,0,0,0,0,0,2.26690225624989,0,0,8.03971753194641,7.80072295243825,0,0,0,0,0,0,0,0,0,2.97512847649761,3.65161127993702,3.70076866234294,2.4277867405332,0.464845549297286,0.94443704049192,0.6970372701606,0.308033580176089,0,0,0.9266210955196,0.858749320451947,0,0,0,0,0,0.95460974377781,3.13979456079692,0,0,0,0.202182481573316,1.58510321173008,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0.66343897524122,2.63070531152258,0,0.655894752046633,0.202910376962704,0,0,0,0,0,0,0,0,0,0.349934720244983,3.07910760721639,2.01090682660736,11.9780083347455,1.97701981631236,1.29151611801369,5.05414427002877,1.7737206141467,1.1486170010348,0,0,0,0,0,0,0,0,0.320472213382419,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0.23874448473769,1.48482340416319,2.15012491469462,0,0,0.222617410045812,0,0,0,0,0.503865495708552,0.102268682502155,0,0,1.3480252672099,0.895105873378046,0,0,0,0,0,0,0,3.38556089410803,6.55949999971468,0,0.227586896570999,0,4.72775363535873,0,0.291604613383254,0.520874984799877,0,0,0,0.221158519862449,0,0,6.97206166521537,0.41827123283581,0.538651809526579,0,0.23056390438806,0,0.54323685961004,0.638002319463839,1.09917112082235,2.13213910407454,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0.586993856796269,1.69946265673865,0.394584402849391,0,0,0,0.300646838828985,0.933193722575224,0,0,0.627865836814451,0,3.41531455235751,1.10939738410511,0.347119476670262,1.07791637155815,2.78589461057288,1.22308667769421,0.171986032471617,3.09620260125072,4.97007356186062,2.95615645391553,0.775912131907355,0,1.35588444468319,0,0.397429223405979,0,0.391102765469606,1.04206466326994,0,5.19504984913539,0.72045208577053,0,0,0,0,1.88555227693436,0.815425236441684,1.569042694685,2.95794831145333,0,0,0,0,3.0083580899397,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67717343799633,0.630445658393585,0.681909645754975,1.37280437475228,3.04788476865836,2.30298236783334,0,0,0,0,0,0,3.59190574687462,0,1.19271615249795,2.83280228800314,0,0,0,0,1.71086837884329,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0,0,0,0,0,0,0,0,1.74972571146949,3.94287705608284,4.85291067026445,0.235265819698172,2.34167452903441,3.04334160082733,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.322231671127465,0,0,0,0,0,0,2.11881813448034,1.07220795687463,6.7858515910955,1.36023555307363,2.54674721756217,2.20263034055821,1.25362188757041,1.23520578864389,3.50854479325931,1.23682402162117,6.17324922466927,1.35153952522458,0.512483037175893,2.76344273384959,3.03859956177382,0,0,0,0,0.327609848846413,1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| |||
|short_description=p8@TFAP2A | |||
}} |
Revision as of 09:55, 22 January 2014
Short description: | p8@TFAP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TFAP2A_5end |
Coexpression cluster: | C2835_Melanocyte_myxofibrosarcoma_placenta_cervical_Corneal_breast_salivary |
Association with transcript: | -30bp_to_ENST00000498450_5end |
EntrezGene: | TFAP2A |
HGNC: | 11742 |
UniProt: | C9JXZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.36e-47 | 253 |
ecto-epithelial cell | 4.56e-16 | 34 |
endo-epithelial cell | 7.98e-16 | 42 |
squamous epithelial cell | 5.45e-13 | 63 |
general ecto-epithelial cell | 2.75e-11 | 14 |
embryonic cell | 3.27e-10 | 250 |
endodermal cell | 3.37e-10 | 58 |
mesothelial cell | 4.25e-10 | 19 |
respiratory epithelial cell | 7.13e-10 | 13 |
glandular epithelial cell | 1.00e-09 | 9 |
columnar/cuboidal epithelial cell | 9.74e-09 | 27 |
stratified squamous epithelial cell | 3.48e-08 | 6 |
keratin accumulating cell | 3.48e-08 | 6 |
stratified epithelial cell | 3.48e-08 | 6 |
keratinizing barrier epithelial cell | 3.48e-08 | 6 |
epithelial fate stem cell | 3.48e-08 | 6 |
stratified epithelial stem cell | 3.48e-08 | 6 |
surface ectodermal cell | 3.48e-08 | 6 |
acinar cell | 3.56e-08 | 5 |
melanocyte | 7.19e-08 | 10 |
melanoblast | 7.19e-08 | 10 |
epithelial cell of alimentary canal | 1.15e-07 | 20 |
epidermal cell | 1.29e-07 | 9 |
keratinocyte | 2.65e-07 | 5 |
neurecto-epithelial cell | 5.04e-07 | 20 |
ectodermal cell | 7.04e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 5.07e-17 | 74 |
respiratory tract | 3.33e-13 | 54 |
respiratory primordium | 8.53e-13 | 38 |
endoderm of foregut | 8.53e-13 | 38 |
larynx | 1.15e-12 | 9 |
segment of respiratory tract | 3.58e-11 | 47 |
endoderm-derived structure | 1.06e-10 | 160 |
endoderm | 1.06e-10 | 160 |
presumptive endoderm | 1.06e-10 | 160 |
surface structure | 1.25e-09 | 99 |
extraembryonic membrane | 3.12e-09 | 14 |
membranous layer | 3.12e-09 | 14 |
skin epidermis | 3.54e-08 | 15 |
outer epithelium | 3.54e-08 | 15 |
enveloping layer of ectoderm | 3.54e-08 | 15 |
foregut | 1.24e-07 | 87 |
upper respiratory tract | 3.47e-07 | 19 |
skin of body | 6.88e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.30e-13 | 106 |
cell type cancer | 5.16e-13 | 143 |
cancer | 1.05e-08 | 235 |
disease of cellular proliferation | 3.45e-08 | 239 |