FFCP PHASE1:Hg19::chr7:130126058..130126069,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7028 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=12bp_to_ENST00000341441,uc003vqc.2,uc003vqd.2_5end | |||
|description=CAGE_peak_7_at_MEST_5end | |||
|id=chr7:130126058..130126069,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;2.61e-10;2!CL:0002586;3.81e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.04e-10,2;CL:0002586,2.47e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.73e-12!106;DOID:162!9.90e-09!235;DOID:14566!4.60e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:4362;3.34e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,3.71e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0003056!9.32e-18!61;UBERON:0005743!1.40e-17!86;UBERON:0003080!6.06e-16!42;UBERON:0003075!2.13e-15!86;UBERON:0007284!2.13e-15!86;UBERON:0001017!2.58e-15!82;UBERON:0001869!2.65e-15!32;UBERON:0000956!2.73e-15!25;UBERON:0000203!2.73e-15!25;UBERON:0002780!2.89e-15!41;UBERON:0001890!2.89e-15!41;UBERON:0006240!2.89e-15!41;UBERON:0000073!4.73e-15!94;UBERON:0001016!4.73e-15!94;UBERON:0001893!6.86e-15!34;UBERON:0002616!3.37e-14!59;UBERON:0002791!4.28e-14!33;UBERON:0002346!6.02e-14!90;UBERON:0002619!9.95e-14!22;UBERON:0001049!1.55e-13!57;UBERON:0005068!1.55e-13!57;UBERON:0006241!1.55e-13!57;UBERON:0007135!1.55e-13!57;UBERON:0000955!3.73e-13!69;UBERON:0006238!3.73e-13!69;UBERON:0000153!5.75e-13!129;UBERON:0007811!5.75e-13!129;UBERON:0000033!9.25e-13!123;UBERON:0001950!9.43e-13!20;UBERON:0002020!1.97e-12!34;UBERON:0003528!1.97e-12!34;UBERON:0004121!1.60e-10!169;UBERON:0000924!8.44e-10!173;UBERON:0006601!8.44e-10!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;9.29e-17;20!UBERON:0002619;3.66e-15;22!UBERON:0000956;3.13e-13;25!UBERON:0000203;3.13e-13;25!UBERON:0001869;1.54e-11;32!UBERON:0001876;8.28e-11;2!UBERON:0001893;2.25e-10;34!UBERON:0006955;2.61e-10;2!UBERON:0004801;2.61e-10;2!UBERON:0002791;3.10e-09;32!UBERON:0002780;7.42e-09;41!UBERON:0001890;7.42e-09;41!UBERON:0003528;8.78e-09;34!UBERON:0002020;8.78e-09;34!UBERON:0000002;9.74e-08;6!UBERON:0001560;9.74e-08;6!UBERON:0001781;3.81e-07;3!UBERON:0001782;3.81e-07;3!UBERON:0001871;6.80e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,8.32e-17,20;UBERON:0002619,3.31e-15,22;UBERON:0000956,2.87e-13,25;UBERON:0000203,2.87e-13,25;UBERON:0001869,2.02e-12,32;UBERON:0003056,8.68e-12,61;UBERON:0001893,1.33e-11,34;UBERON:0002780,2.61e-11,41;UBERON:0001890,2.61e-11,41;UBERON:0003080,2.61e-11,41;UBERON:0006240,2.61e-11,41;UBERON:0001876,1.12e-10,2;UBERON:0006955,3.04e-10,2;UBERON:0004801,3.04e-10,2;UBERON:0002791,4.05e-10,32;UBERON:0003528,1.88e-09,34;UBERON:0002020,1.88e-09,34;UBERON:0000073,2.50e-08,53;UBERON:0002616,2.50e-08,53;UBERON:0003075,4.55e-08,82;UBERON:0007284,4.55e-08,82;UBERON:0001049,8.80e-08,56;UBERON:0005068,8.80e-08,56;UBERON:0006241,8.80e-08,56;UBERON:0007135,8.80e-08,56;UBERON:0000002,1.06e-07,6;UBERON:0001560,1.06e-07,6;UBERON:0002346,1.44e-07,86;UBERON:0001782,2.47e-07,3;UBERON:0005424,2.47e-07,3;UBERON:0001871,7.47e-07,6;UBERON:0010371,8.59e-07,104;UBERON:0001017,9.40e-07,81 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0.492484232307152,0,0.313454721478088,0.85870796139317,0.410623275218653,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0,2.05520307534393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.68152568894461,5.26768169550154,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0.535081656179426,1.04535523804977,0,0.383220493601921,0,0,0.95569624297229,0.651083453856419,0.950452044448374,0,0.639933055772092,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0.378139268656271,0.665188192387692,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.625098097988558,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0.286804595389004,0,0.265059536642971,0,0.414644220061482,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0.964044119533928,0.55146986366197,0.871517776369625,0,0,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0.491953754172454,0.514703430895577,0,0,0.100528972411631,0.462942225792648,0,0,1.44331342025273,0.34779121492523,0,0,0,0,0,0.858486162094873,0,0,0,0.93733833986777,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00509759200609,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.447749509444357,0.219259876645935,0.261435451024901,0.512900250232778,1.64007322849853,1.30151357865721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,1.13929437434833,0,0.822724546172388,0,0.540031437238115,0.79312517629427,0,0,0,1.11481905075431,0,0,0,2.59453182862662,0.383010740264733,1.05836791361941,1.62310970137278,0,0,0.313359791546046,0,0,0,0.403599414382095,0.851692475380653,0.343505344755765,0.307240764308458,0.223676107892416,0.333698283423817,0,0,0,0,0,2.81974010175699,0.18714054040822,0,0,0,0,0,0.296964680832639,0,3.97659059106519,1.1253553312841,0.111308705022906,0,0.211125408127993,0,0,1.25966373927138,0,0,0,0,0.179021174675609,0,0,2.3948309234694,0,0,0.556608588971108,0,0,0.174919999992391,0.724999575434793,0.910347586283997,0,0.472775363535873,1.03423011972439,0,0.173624994933292,0,0.723578631752448,0,0,0,0.87754158861589,0.871507708151921,0.41827123283581,0,0,0.23056390438806,0,0,0,0,0,0,1.72678282034527,0.664846727600626,0,0,0,0,0.794682894901893,0,0.489698424477443,0.424059214301822,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,2.75465485467441,0.063186579628488,0,0,0,0,0,0,0.853828638089378,0,0,0.489961987071888,1.21882889212564,0,0,0.483781656445426,0.584714536689484,0.739039113478883,0.0969890164884194,0,0,0,0,1.39283751102933,0.195551382734803,0.961905843018405,0,0,0,0,0.343189995723929,1.58460277786965,0,0.235694034616795,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0.202210631562555,0.295282444544246,0,0.795229689809303,0.136203406111576,0.160753148465019,0.550157746388935,0.83088067605837,0,0,1.64023802976667,0.335434687599266,0,0.367182116944987,0.844802692155252,0,0.575745591958336,0,0,0,0,0,0,0,1.55975789423744,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0.988058159489721,0,0.638341257770182,0,0.5013797880454,0,0,0.314108192500469,0,0.366078794705889,0.3755727921195,0,0.110929051536852,0.0620964029413835,0.553394539744923,0,0,0,0.235265819698172,0.468334905806882,1.30428925749743,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0.601030435988874,0,0,0,0.429642228169954,0,0.398095888698616,0,0,0,0,0,1.07220795687463,0,0.226705925512272,0,0.244736704506468,0,0.308801447160972,1.31570429747224,0.176689145945881,0,0,0,0,0.911579868532147,0.553033744606923,0,0,0,0,0,0.211312123358627,0,1.06691729694141,0,0,0,0,0,0,0,0,0.54604819096007,0,0,0,0,0,0,0,0,0,0.770750701157514,1.41696576325585,0,0.41023272848151,1.00828678488687,0.760729777106397,1.45328081068666,0,0.0981477185010256,0.235939446695481,0,0.808679663052368,0,0,0,0.225630985047772,0,0,0,1.14640342257068,0.295712172434091,1.01306376927592,1.56215619722769,0.413373593002368,0.760989722326882,1.09394961803644,0.548257766857182,0,0,0.127762427639595,0.535701835878287,1.00885116665647,0.606965604236632,0,0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| |||
|short_description=p7@MEST | |||
}} |
Revision as of 19:17, 22 January 2014
Short description: | p7@MEST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MEST_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000341441, uc003vqc.2, uc003vqd.2_5end |
EntrezGene: | MEST |
HGNC: | 7028 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.04e-10 | 2 |
retinal pigment epithelial cell | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neocortex | 8.32e-17 | 20 |
regional part of cerebral cortex | 3.31e-15 | 22 |
cerebral cortex | 2.87e-13 | 25 |
pallium | 2.87e-13 | 25 |
cerebral hemisphere | 2.02e-12 | 32 |
pre-chordal neural plate | 8.68e-12 | 61 |
telencephalon | 1.33e-11 | 34 |
regional part of forebrain | 2.61e-11 | 41 |
forebrain | 2.61e-11 | 41 |
anterior neural tube | 2.61e-11 | 41 |
future forebrain | 2.61e-11 | 41 |
amygdala | 1.12e-10 | 2 |
uterine epithelium | 3.04e-10 | 2 |
cervix epithelium | 3.04e-10 | 2 |
regional part of telencephalon | 4.05e-10 | 32 |
brain grey matter | 1.88e-09 | 34 |
gray matter | 1.88e-09 | 34 |
regional part of nervous system | 2.50e-08 | 53 |
regional part of brain | 2.50e-08 | 53 |
neural plate | 4.55e-08 | 82 |
presumptive neural plate | 4.55e-08 | 82 |
neural tube | 8.80e-08 | 56 |
neural rod | 8.80e-08 | 56 |
future spinal cord | 8.80e-08 | 56 |
neural keel | 8.80e-08 | 56 |
uterine cervix | 1.06e-07 | 6 |
neck of organ | 1.06e-07 | 6 |
neurectoderm | 1.44e-07 | 86 |
pigmented layer of retina | 2.47e-07 | 3 |
presumptive retinal pigmented epithelium | 2.47e-07 | 3 |
temporal lobe | 7.47e-07 | 6 |
ecto-epithelium | 8.59e-07 | 104 |
central nervous system | 9.40e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.71e-09 | 5 |