FFCP PHASE1:Hg19::chr10:124143018..124143022,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:124143018..124143022,+ to FFCP PHASE1:Hg19::chr10:124143018..124143022,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:124143018..124143022,+ | |||
|description=CAGE_peak_at_chr10:124143018..124143022,+ | |||
|id=chr10:124143018..124143022,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;7.72e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.33e-18!115;UBERON:0002780!3.77e-15!41;UBERON:0001890!3.77e-15!41;UBERON:0006240!3.77e-15!41;UBERON:0003080!1.83e-14!42;UBERON:0002020!1.37e-13!34;UBERON:0003528!1.37e-13!34;UBERON:0001893!1.48e-13!34;UBERON:0002791!3.22e-13!33;UBERON:0001049!4.25e-13!57;UBERON:0005068!4.25e-13!57;UBERON:0006241!4.25e-13!57;UBERON:0007135!4.25e-13!57;UBERON:0001869!1.26e-12!32;UBERON:0002616!4.32e-11!59;UBERON:0002346!2.79e-10!90;UBERON:0000955!5.82e-10!69;UBERON:0006238!5.82e-10!69;UBERON:0003056!9.86e-10!61;UBERON:0003075!3.62e-09!86;UBERON:0007284!3.62e-09!86;UBERON:0000956!1.48e-08!25;UBERON:0000203!1.48e-08!25;UBERON:0000153!2.01e-08!129;UBERON:0007811!2.01e-08!129;UBERON:0000033!4.52e-08!123;UBERON:0001017!5.07e-08!82;UBERON:0002420!1.09e-07!9;UBERON:0007245!1.09e-07!9;UBERON:0010009!1.09e-07!9;UBERON:0010011!1.09e-07!9;UBERON:0000454!1.09e-07!9;UBERON:0001950!1.50e-07!20;UBERON:0005743!1.90e-07!86;UBERON:0002619!2.93e-07!22;UBERON:0002308!5.78e-07!9;UBERON:0000125!5.78e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002702;4.04e-13;2!UBERON:0003528;5.16e-12;34!UBERON:0002020;5.16e-12;34!UBERON:0000956;1.11e-10;25!UBERON:0000203;1.11e-10;25!UBERON:0001950;5.46e-10;20!UBERON:0000200;7.13e-10;6!UBERON:0001869;1.20e-09;32!UBERON:0001893;3.38e-09;34!UBERON:0002791;3.47e-09;32!UBERON:0002619;4.51e-09;22!UBERON:0002780;4.74e-09;41!UBERON:0001890;4.74e-09;41!UBERON:0001870;4.85e-09;3!UBERON:0000073;2.31e-08;53!UBERON:0002616;2.31e-08;53!UBERON:0007029;2.13e-07;1!UBERON:0000029;2.13e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,2.06e-13,2;UBERON:0001049,4.14e-13,56;UBERON:0005068,4.14e-13,56;UBERON:0006241,4.14e-13,56;UBERON:0007135,4.14e-13,56;UBERON:0002780,6.94e-13,41;UBERON:0001890,6.94e-13,41;UBERON:0003080,6.94e-13,41;UBERON:0006240,6.94e-13,41;UBERON:0003528,1.16e-12,34;UBERON:0002020,1.16e-12,34;UBERON:0000073,1.13e-11,53;UBERON:0002616,1.13e-11,53;UBERON:0002791,9.57e-11,32;UBERON:0001869,9.57e-11,32;UBERON:0000956,1.09e-10,25;UBERON:0000203,1.09e-10,25;UBERON:0001950,4.50e-10,20;UBERON:0001893,4.59e-10,34;UBERON:0000200,5.37e-10,6;UBERON:0001870,3.11e-09,3;UBERON:0002619,3.79e-09,22;UBERON:0000955,1.51e-08,68;UBERON:0006238,1.51e-08,68;UBERON:0001017,2.70e-08,81;UBERON:0003075,2.70e-08,82;UBERON:0007284,2.70e-08,82;UBERON:0003056,3.62e-08,61;UBERON:0002346,8.22e-08,86;UBERON:0000029,1.72e-07,1;UBERON:0007029,1.95e-07,1;UBERON:0010371,2.85e-07,104;UBERON:0001016,2.88e-07,89 | |||
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| ||
|short_description=p@chr10:124143018..124143022,+ | |||
}} | }} |
Latest revision as of 11:12, 23 July 2015
Short description: | p@chr10:124143018..124143022, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:124143018..124143022, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 2.06e-13 | 2 |
neural tube | 4.14e-13 | 56 |
neural rod | 4.14e-13 | 56 |
future spinal cord | 4.14e-13 | 56 |
neural keel | 4.14e-13 | 56 |
regional part of forebrain | 6.94e-13 | 41 |
forebrain | 6.94e-13 | 41 |
anterior neural tube | 6.94e-13 | 41 |
future forebrain | 6.94e-13 | 41 |
brain grey matter | 1.16e-12 | 34 |
gray matter | 1.16e-12 | 34 |
regional part of nervous system | 1.13e-11 | 53 |
regional part of brain | 1.13e-11 | 53 |
regional part of telencephalon | 9.57e-11 | 32 |
cerebral hemisphere | 9.57e-11 | 32 |
cerebral cortex | 1.09e-10 | 25 |
pallium | 1.09e-10 | 25 |
neocortex | 4.50e-10 | 20 |
telencephalon | 4.59e-10 | 34 |
gyrus | 5.37e-10 | 6 |
frontal cortex | 3.11e-09 | 3 |
regional part of cerebral cortex | 3.79e-09 | 22 |
brain | 1.51e-08 | 68 |
future brain | 1.51e-08 | 68 |
central nervous system | 2.70e-08 | 81 |
neural plate | 2.70e-08 | 82 |
presumptive neural plate | 2.70e-08 | 82 |
pre-chordal neural plate | 3.62e-08 | 61 |
neurectoderm | 8.22e-08 | 86 |
lymph node | 1.72e-07 | 1 |
surface | 1.95e-07 | 1 |
ecto-epithelium | 2.85e-07 | 104 |
nervous system | 2.88e-07 | 89 |