FFCP PHASE1:Hg19::chr10:91294069..91294078,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:91294069..91294078,+ | |||
|description=CAGE_peak_at_chr10:91294069..91294078,+ | |||
|id=chr10:91294069..91294078,+ | |||
|ontology_enrichment_celltype=CL:0000064!3.56e-27!3;CL:0005012!3.56e-27!3;CL:0000067!3.56e-27!3;CL:0002304!3.56e-27!3;CL:0000167!3.71e-10!1;CL:0000164!3.71e-10!1;CL:0000502!3.71e-10!1;CL:0000172!3.71e-10!1;CL:0000173!3.71e-10!1;CL:0002351!3.71e-10!1;CL:0000306!1.07e-09!4;CL:0002222!1.07e-09!4;CL:0002224!1.07e-09!4;CL:0000075!5.00e-08!27 | |||
|ontology_enrichment_celltype_v019=CL:0000306;3.42e-11;4!CL:0002222;3.42e-11;4!CL:0002224;3.42e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,3.79e-11,4;CL:0002222,3.79e-11,4;CL:0002224,3.79e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.83e-14;3 | |||
|ontology_enrichment_disease=DOID:4430!3.71e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!3.56e-27!3;UBERON:0001775!3.56e-27!3;UBERON:0000970!7.16e-21!20;UBERON:0000488!1.50e-20!4;UBERON:0007625!6.57e-20!11;UBERON:0002104!7.61e-20!21;UBERON:0000020!4.66e-18!23;UBERON:0001032!2.82e-17!24;UBERON:0004456!2.82e-17!24;UBERON:0000019!2.49e-16!19;UBERON:0000047!2.49e-16!19;UBERON:0004088!2.49e-16!19;UBERON:0003072!2.49e-16!19;UBERON:0003071!2.49e-16!19;UBERON:0004128!2.49e-16!19;UBERON:0001801!1.26e-15!14;UBERON:0001456!9.82e-15!21;UBERON:0002203!6.70e-14!6;UBERON:0001768!6.70e-14!6;UBERON:0001896!1.33e-12!3;UBERON:0005290!1.33e-12!3;UBERON:0010096!1.33e-12!3;UBERON:0003075!2.04e-12!86;UBERON:0007284!2.04e-12!86;UBERON:0002346!8.77e-12!90;UBERON:0005085!1.52e-10!29;UBERON:0003056!3.70e-10!61;UBERON:0006834!6.91e-10!1;UBERON:0002336!8.99e-10!1;UBERON:0001018!8.99e-10!1;UBERON:0002473!8.99e-10!1;UBERON:0005340!8.99e-10!1;UBERON:0002316!8.99e-10!1;UBERON:0003544!8.99e-10!1;UBERON:0001020!8.99e-10!1;UBERON:0005970!8.99e-10!1;UBERON:0002437!8.99e-10!1;UBERON:0001882!9.82e-10!1;UBERON:0005403!9.82e-10!1;UBERON:0002363!1.07e-09!1;UBERON:0007647!1.07e-09!1;UBERON:0010115!1.07e-09!1;UBERON:0010077!1.07e-09!4;UBERON:0005389!1.07e-09!4;UBERON:0000484!1.07e-09!4;UBERON:0002546!1.07e-09!4;UBERON:0000965!1.07e-09!4;UBERON:0001803!1.07e-09!4;UBERON:0003073!1.07e-09!4;UBERON:0005426!1.07e-09!4;UBERON:0002200!8.23e-08!11;UBERON:0006876!8.23e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;1.31e-14;3!UBERON:0005290;1.31e-14;3!UBERON:0010077;3.42e-11;4!UBERON:0005389;3.42e-11;4!UBERON:0000484;3.42e-11;4!UBERON:0000965;3.42e-11;4!UBERON:0001803;3.42e-11;4!UBERON:0000019;2.46e-09;19!UBERON:0000047;2.46e-09;19!UBERON:0004088;2.46e-09;19!UBERON:0010230;2.46e-09;19!UBERON:0000966;3.22e-09;5!UBERON:0005388;3.22e-09;5!UBERON:0001802;3.22e-09;5!UBERON:0000970;6.42e-09;20!UBERON:0002104;1.53e-08;21!UBERON:0001456;1.53e-08;21!UBERON:0002298;5.73e-08;6!UBERON:0000020;6.98e-08;23!UBERON:0001032;1.36e-07;24!UBERON:0004456;1.36e-07;24!UBERON:0001871;5.22e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,1.22e-14,3;UBERON:0005290,1.22e-14,3;UBERON:0010096,1.22e-14,3;UBERON:0010077,3.79e-11,4;UBERON:0005389,3.79e-11,4;UBERON:0000484,3.79e-11,4;UBERON:0002546,3.79e-11,4;UBERON:0000965,3.79e-11,4;UBERON:0001803,3.79e-11,4;UBERON:0003073,3.79e-11,4;UBERON:0005426,3.79e-11,4;UBERON:0000019,6.42e-09,20;UBERON:0000047,6.42e-09,20;UBERON:0010312,6.42e-09,20;UBERON:0004088,6.42e-09,20;UBERON:0010230,6.42e-09,20;UBERON:0003072,6.42e-09,20;UBERON:0004128,6.42e-09,20;UBERON:0003071,6.42e-09,20;UBERON:0000970,1.53e-08,21;UBERON:0002104,1.53e-08,21;UBERON:0003075,2.59e-08,82;UBERON:0007284,2.59e-08,82;UBERON:0001456,3.39e-08,22;UBERON:0002298,5.54e-08,6;UBERON:0002346,5.87e-08,86;UBERON:0000966,6.34e-08,6;UBERON:0005388,6.34e-08,6;UBERON:0001802,6.34e-08,6;UBERON:0000020,1.36e-07,24;UBERON:0001032,1.36e-07,24;UBERON:0004456,1.36e-07,24;UBERON:0001871,5.38e-07,6 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.665188192387692,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57611414598396,0.681909645754975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86704597845036,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71543706023975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr10:91294069..91294078,+ | |||
}} |
Latest revision as of 16:39, 23 July 2015
Short description: | p@chr10:91294069..91294078, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:91294069..91294078, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 3.79e-11 | 4 |
vertebrate lens cell | 3.79e-11 | 4 |
lens epithelial cell | 3.79e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 1.22e-14 | 3 |
myelencephalon | 1.22e-14 | 3 |
future myelencephalon | 1.22e-14 | 3 |
cuboidal epithelium | 3.79e-11 | 4 |
transparent eye structure | 3.79e-11 | 4 |
simple cuboidal epithelium | 3.79e-11 | 4 |
cranial placode | 3.79e-11 | 4 |
lens of camera-type eye | 3.79e-11 | 4 |
epithelium of lens | 3.79e-11 | 4 |
lens placode | 3.79e-11 | 4 |
lens vesicle | 3.79e-11 | 4 |
camera-type eye | 6.42e-09 | 20 |
simple eye | 6.42e-09 | 20 |
immature eye | 6.42e-09 | 20 |
ocular region | 6.42e-09 | 20 |
eyeball of camera-type eye | 6.42e-09 | 20 |
optic cup | 6.42e-09 | 20 |
optic vesicle | 6.42e-09 | 20 |
eye primordium | 6.42e-09 | 20 |
eye | 1.53e-08 | 21 |
visual system | 1.53e-08 | 21 |
neural plate | 2.59e-08 | 82 |
presumptive neural plate | 2.59e-08 | 82 |
face | 3.39e-08 | 22 |
brainstem | 5.54e-08 | 6 |
neurectoderm | 5.87e-08 | 86 |
retina | 6.34e-08 | 6 |
photoreceptor array | 6.34e-08 | 6 |
posterior segment of eyeball | 6.34e-08 | 6 |
sense organ | 1.36e-07 | 24 |
sensory system | 1.36e-07 | 24 |
entire sense organ system | 1.36e-07 | 24 |
temporal lobe | 5.38e-07 | 6 |