FFCP PHASE1:Hg19::chr11:66495923..66495937,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:66495923..66495937,- | |||
|description=CAGE_peak_at_chr11:66495923..66495937,- | |description=CAGE_peak_at_chr11:66495923..66495937,- | ||
|id=chr11:66495923..66495937,- | |id=chr11:66495923..66495937,- | ||
|ontology_enrichment_celltype=CL:0000066!3.07e-28!254;CL:0002321!4.33e-12!248;CL:0000220!2.37e-11!246;CL:0000221!3.49e-10!71;CL:0000133!3.77e-09!59;CL:0002319!4.02e-09!25;CL:0000076!3.92e-08!62;CL:1000507!1.63e-07!12;CL:1000494!1.63e-07!12;CL:0002139!5.52e-07!24;CL:1000449!6.05e-07!16;CL:0000333!8.35e-07!41 | |ontology_enrichment_celltype=CL:0000066!3.07e-28!254;CL:0002321!4.33e-12!248;CL:0000220!2.37e-11!246;CL:0000221!3.49e-10!71;CL:0000133!3.77e-09!59;CL:0002319!4.02e-09!25;CL:0000076!3.92e-08!62;CL:1000507!1.63e-07!12;CL:1000494!1.63e-07!12;CL:0002139!5.52e-07!24;CL:1000449!6.05e-07!16;CL:0000333!8.35e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.74e-13;25!CL:1000449;6.28e-12;15!CL:1000507;1.23e-10;10!CL:1000494;1.23e-10;10!CL:1000497;3.44e-10;17!CL:0002518;3.44e-10;17!CL:0002681;6.78e-10;12!CL:0002584;6.78e-10;12!CL:0002321;9.05e-10;15!CL:0000333;5.89e-09;5!CL:0002322;1.25e-08;5!CL:0000095;3.51e-08;17!CL:0000128;1.67e-07;7!CL:0000126;1.67e-07;7!CL:0000127;1.67e-07;7!CL:0000540;3.06e-07;6!CL:0000404;3.06e-07;6 | |ontology_enrichment_celltype_v019=CL:0002319;1.74e-13;25!CL:1000449;6.28e-12;15!CL:1000507;1.23e-10;10!CL:1000494;1.23e-10;10!CL:1000497;3.44e-10;17!CL:0002518;3.44e-10;17!CL:0002681;6.78e-10;12!CL:0002584;6.78e-10;12!CL:0002321;9.05e-10;15!CL:0000333;5.89e-09;5!CL:0002322;1.25e-08;5!CL:0000095;3.51e-08;17!CL:0000128;1.67e-07;7!CL:0000126;1.67e-07;7!CL:0000127;1.67e-07;7!CL:0000540;3.06e-07;6!CL:0000404;3.06e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000133,6.09e-15,59;CL:0002319,3.18e-13,25;CL:0000221,1.09e-12,72;CL:1000449,3.56e-12,15;CL:1000507,6.79e-11,10;CL:1000494,6.79e-11,10;CL:1000497,2.11e-10,17;CL:0002518,2.11e-10,17;CL:0002681,3.84e-10,12;CL:0002584,3.84e-10,12;CL:0000066,4.71e-10,253;CL:0000333,5.00e-10,41;CL:0002322,1.88e-08,5;CL:0000095,5.61e-08,17;CL:0000123,5.61e-08,17;CL:0000128,1.86e-07,7;CL:0000126,1.86e-07,7;CL:0000127,1.86e-07,7;CL:0002453,1.86e-07,7;CL:0000540,2.86e-07,6;CL:0000031,2.86e-07,6;CL:0000404,2.86e-07,6;CL:0000047,3.83e-07,8;CL:0002321,5.39e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000133;1.26e-07;59!CL:0000031;3.06e-07;6 | |ontology_enrichment_development_v019=CL:0000133;1.26e-07;59!CL:0000031;3.06e-07;6 | ||
|ontology_enrichment_disease=DOID:0050687!1.98e-11!143;DOID:305!2.09e-10!106;DOID:162!1.86e-07!235;DOID:14566!2.46e-07!239;DOID:171!7.49e-07!10 | |ontology_enrichment_disease=DOID:0050687!1.98e-11!143;DOID:305!2.09e-10!106;DOID:162!1.86e-07!235;DOID:14566!2.46e-07!239;DOID:171!7.49e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:171;5.03e-08;10!DOID:169;2.32e-07;6!DOID:3095;3.79e-07;22!DOID:2994;3.79e-07;22 | |ontology_enrichment_disease_v019=DOID:171;5.03e-08;10!DOID:169;2.32e-07;6!DOID:3095;3.79e-07;22!DOID:2994;3.79e-07;22 | ||
|ontology_enrichment_disease_v019_2=DOID:171,3.51e-08,10;DOID:169,1.44e-07,6;DOID:3095,2.50e-07,22;DOID:2994,2.50e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000924!3.65e-13!173;UBERON:0006601!3.65e-13!173;UBERON:0000073!4.10e-12!94;UBERON:0001016!4.10e-12!94;UBERON:0004121!5.81e-12!169;UBERON:0000033!3.52e-11!123;UBERON:0005743!1.49e-10!86;UBERON:0000153!3.32e-10!129;UBERON:0007811!3.32e-10!129;UBERON:0000119!3.34e-09!312;UBERON:0000483!7.00e-09!309;UBERON:0001017!8.56e-09!82;UBERON:0002346!1.37e-08!90;UBERON:0000477!2.61e-08!286;UBERON:0003056!2.77e-08!61;UBERON:0004111!5.88e-08!241;UBERON:0000922!5.95e-08!612;UBERON:0009773!1.63e-07!12;UBERON:0001231!1.63e-07!12;UBERON:0004810!1.63e-07!12;UBERON:0000064!1.91e-07!219;UBERON:0003075!2.00e-07!86;UBERON:0007284!2.00e-07!86;UBERON:0000955!4.94e-07!69;UBERON:0006238!4.94e-07!69;UBERON:0004211!6.05e-07!16;UBERON:0001285!6.05e-07!16;UBERON:0007684!6.05e-07!16;UBERON:0003220!6.05e-07!16;UBERON:0004208!6.05e-07!16;UBERON:0006555!6.86e-07!17;UBERON:0005103!6.86e-07!17;UBERON:0000083!6.86e-07!17;UBERON:0009201!6.86e-07!17;UBERON:0004819!6.86e-07!17;UBERON:0006553!6.86e-07!17;UBERON:0003074!6.86e-07!17;UBERON:0003060!6.86e-07!17;UBERON:0000025!7.03e-07!194;UBERON:0000481!7.50e-07!347;UBERON:0007625!9.44e-07!11 | |ontology_enrichment_uberon=UBERON:0000924!3.65e-13!173;UBERON:0006601!3.65e-13!173;UBERON:0000073!4.10e-12!94;UBERON:0001016!4.10e-12!94;UBERON:0004121!5.81e-12!169;UBERON:0000033!3.52e-11!123;UBERON:0005743!1.49e-10!86;UBERON:0000153!3.32e-10!129;UBERON:0007811!3.32e-10!129;UBERON:0000119!3.34e-09!312;UBERON:0000483!7.00e-09!309;UBERON:0001017!8.56e-09!82;UBERON:0002346!1.37e-08!90;UBERON:0000477!2.61e-08!286;UBERON:0003056!2.77e-08!61;UBERON:0004111!5.88e-08!241;UBERON:0000922!5.95e-08!612;UBERON:0009773!1.63e-07!12;UBERON:0001231!1.63e-07!12;UBERON:0004810!1.63e-07!12;UBERON:0000064!1.91e-07!219;UBERON:0003075!2.00e-07!86;UBERON:0007284!2.00e-07!86;UBERON:0000955!4.94e-07!69;UBERON:0006238!4.94e-07!69;UBERON:0004211!6.05e-07!16;UBERON:0001285!6.05e-07!16;UBERON:0007684!6.05e-07!16;UBERON:0003220!6.05e-07!16;UBERON:0004208!6.05e-07!16;UBERON:0006555!6.86e-07!17;UBERON:0005103!6.86e-07!17;UBERON:0000083!6.86e-07!17;UBERON:0009201!6.86e-07!17;UBERON:0004819!6.86e-07!17;UBERON:0006553!6.86e-07!17;UBERON:0003074!6.86e-07!17;UBERON:0003060!6.86e-07!17;UBERON:0000025!7.03e-07!194;UBERON:0000481!7.50e-07!347;UBERON:0007625!9.44e-07!11 | ||
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| ||
|short_description=p@chr11:66495923..66495937,- | |short_description=p@chr11:66495923..66495937,- | ||
}} | }} |
Latest revision as of 01:14, 24 July 2015
Short description: | p@chr11:66495923..66495937, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:66495923..66495937, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 6.09e-15 | 59 |
neural cell | 3.18e-13 | 25 |
ectodermal cell | 1.09e-12 | 72 |
epithelial cell of nephron | 3.56e-12 | 15 |
kidney tubule cell | 6.79e-11 | 10 |
nephron tubule epithelial cell | 6.79e-11 | 10 |
kidney cell | 2.11e-10 | 17 |
kidney epithelial cell | 2.11e-10 | 17 |
kidney cortical cell | 3.84e-10 | 12 |
renal cortical epithelial cell | 3.84e-10 | 12 |
epithelial cell | 4.71e-10 | 253 |
migratory neural crest cell | 5.00e-10 | 41 |
embryonic stem cell | 1.88e-08 | 5 |
neuron associated cell | 5.61e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 5.61e-08 | 17 |
oligodendrocyte | 1.86e-07 | 7 |
macroglial cell | 1.86e-07 | 7 |
astrocyte | 1.86e-07 | 7 |
oligodendrocyte precursor cell | 1.86e-07 | 7 |
neuron | 2.86e-07 | 6 |
neuroblast | 2.86e-07 | 6 |
electrically signaling cell | 2.86e-07 | 6 |
neuronal stem cell | 3.83e-07 | 8 |
embryonic cell | 5.39e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.51e-08 | 10 |
neuroendocrine tumor | 1.44e-07 | 6 |
germ cell and embryonal cancer | 2.50e-07 | 22 |
germ cell cancer | 2.50e-07 | 22 |