FFCP PHASE1:Hg19::chr12:109246574..109246585,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:109246574..109246585,- | |||
|description=CAGE_peak_at_chr12:109246574..109246585,- | |description=CAGE_peak_at_chr12:109246574..109246585,- | ||
|id=chr12:109246574..109246585,- | |id=chr12:109246574..109246585,- | ||
|ontology_enrichment_celltype=CL:0002139!2.67e-22!24;CL:0000115!1.44e-21!35;CL:0002078!8.10e-17!44;CL:0000071!6.89e-15!18;CL:0002546!6.89e-15!18;CL:0000213!3.48e-14!57;CL:0000215!3.48e-14!57;CL:0000222!7.89e-14!119;CL:0005020!2.59e-09!6;CL:0002138!2.59e-09!6;CL:0005022!2.59e-09!6;CL:0000359!2.04e-08!32;CL:0002543!6.66e-08!6;CL:0000220!2.13e-07!246;CL:0002321!3.32e-07!248 | |ontology_enrichment_celltype=CL:0002139!2.67e-22!24;CL:0000115!1.44e-21!35;CL:0002078!8.10e-17!44;CL:0000071!6.89e-15!18;CL:0002546!6.89e-15!18;CL:0000213!3.48e-14!57;CL:0000215!3.48e-14!57;CL:0000222!7.89e-14!119;CL:0005020!2.59e-09!6;CL:0002138!2.59e-09!6;CL:0005022!2.59e-09!6;CL:0000359!2.04e-08!32;CL:0002543!6.66e-08!6;CL:0000220!2.13e-07!246;CL:0002321!3.32e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.53e-25;24!CL:0002138;1.39e-23;6!CL:0000115;3.93e-23;36!CL:0002595;3.12e-17;5!CL:0002078;2.44e-15;45!CL:0002593;8.02e-12;2!CL:0000213;6.96e-11;58!CL:0000215;6.96e-11;58!CL:0000071;3.53e-10;18!CL:0002144;3.18e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.89e-27,36;CL:0002139,8.90e-26,24;CL:0002078,5.19e-24,45;CL:0005020,1.48e-23,6;CL:0002138,1.48e-23,6;CL:0005022,1.48e-23,6;CL:0000213,6.83e-18,58;CL:0000215,6.83e-18,58;CL:0002595,2.44e-17,5;CL:0000222,5.46e-15,121;CL:0002593,4.94e-12,2;CL:0000071,2.37e-10,18;CL:0002546,2.37e-10,18;CL:0002144,1.99e-08,3;CL:0002321,6.19e-08,250 | |||
|ontology_enrichment_development_v019=CL:0005022;1.39e-23;6!CL:0002546;3.53e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.19e-33!69;UBERON:0004872!3.90e-31!84;UBERON:0002049!7.26e-30!79;UBERON:0007798!7.26e-30!79;UBERON:0001981!4.90e-29!60;UBERON:0007500!4.90e-29!60;UBERON:0004537!4.90e-29!60;UBERON:0006965!4.90e-29!60;UBERON:0004535!3.66e-25!110;UBERON:0001009!4.13e-25!113;UBERON:0003914!9.88e-25!118;UBERON:0004111!1.64e-16!241;UBERON:0001637!1.96e-16!42;UBERON:0003509!1.96e-16!42;UBERON:0004572!1.96e-16!42;UBERON:0000025!2.40e-16!194;UBERON:0004573!6.48e-15!33;UBERON:0004571!6.48e-15!33;UBERON:0001986!6.89e-15!18;UBERON:0004638!6.89e-15!18;UBERON:0004852!6.89e-15!18;UBERON:0000477!7.55e-15!286;UBERON:0000487!8.78e-13!22;UBERON:0000947!3.93e-11!21;UBERON:0010191!3.93e-11!21;UBERON:0000483!8.30e-11!309;UBERON:0006914!1.21e-10!25;UBERON:0000490!1.35e-10!138;UBERON:0000119!1.77e-10!312;UBERON:0003513!6.73e-09!8;UBERON:0003081!1.15e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;4.92e-19;7!UBERON:0001473;1.25e-17;8!UBERON:0004536;1.25e-17;8!UBERON:0006558;1.25e-17;8!UBERON:0003834;3.12e-17;5!UBERON:0001533;3.12e-17;5!UBERON:0002465;4.72e-14;10!UBERON:0000055;4.92e-14;65!UBERON:0002456;8.02e-12;2!UBERON:0002049;3.02e-11;75!UBERON:0007798;3.02e-11;75!UBERON:0001637;2.37e-10;42!UBERON:0003509;2.37e-10;42!UBERON:0004572;2.37e-10;42!UBERON:0004573;3.41e-10;33!UBERON:0004571;3.41e-10;33!UBERON:0004638;3.53e-10;18!UBERON:0001986;3.53e-10;18!UBERON:0004852;3.53e-10;18!UBERON:0007500;1.05e-08;56!UBERON:0001981;1.05e-08;56!UBERON:0004537;1.05e-08;56!UBERON:0010523;3.18e-08;3!UBERON:0001915;3.18e-08;3!UBERON:0001982;3.18e-08;3!UBERON:0000487;3.21e-08;22!UBERON:0001280;3.67e-08;3!UBERON:0004647;3.67e-08;3!UBERON:0006914;3.67e-07;25!UBERON:0003914;3.91e-07;74!UBERON:0002405;5.68e-07;27!UBERON:0000490;7.09e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.85e-27,68;UBERON:0002049,2.31e-23,78;UBERON:0007798,2.31e-23,78;UBERON:0003513,3.67e-19,7;UBERON:0004535,4.29e-19,109;UBERON:0001009,1.88e-18,112;UBERON:0001473,1.30e-17,8;UBERON:0004536,1.30e-17,8;UBERON:0006558,1.30e-17,8;UBERON:0003834,2.44e-17,5;UBERON:0001533,2.44e-17,5;UBERON:0007500,3.66e-17,59;UBERON:0001981,3.66e-17,59;UBERON:0004537,3.66e-17,59;UBERON:0006965,3.66e-17,59;UBERON:0004872,8.62e-15,83;UBERON:0002465,4.88e-14,10;UBERON:0003914,9.73e-14,117;UBERON:0002456,4.94e-12,2;UBERON:0004573,1.63e-11,33;UBERON:0004571,1.63e-11,33;UBERON:0001637,8.03e-11,42;UBERON:0003509,8.03e-11,42;UBERON:0004572,8.03e-11,42;UBERON:0004638,2.37e-10,18;UBERON:0001986,2.37e-10,18;UBERON:0004852,2.37e-10,18;UBERON:0004111,1.62e-09,240;UBERON:0010523,1.99e-08,3;UBERON:0001915,1.99e-08,3;UBERON:0001982,1.99e-08,3;UBERON:0001280,2.31e-08,3;UBERON:0004647,2.31e-08,3;UBERON:0005171,2.31e-08,3;UBERON:0000487,2.33e-08,22;UBERON:0000025,1.45e-07,192;UBERON:0006914,2.78e-07,25;UBERON:0003081,5.95e-07,203;UBERON:0001282,8.49e-07,1;UBERON:0009842,8.49e-07,1;UBERON:0003704,8.49e-07,1;UBERON:0001171,8.49e-07,1;UBERON:0001172,8.49e-07,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,1.00267582127178,0.289693037921647,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0.993812036833525,0,1.38856200643038,0,1.67799774483962,0,0.417989933073621,0.258416759169329,2.13459757612026,2.67776490211736,3.62546385398232,0.760272105718513,1.95249646038536,0.735326160691737,2.43042584364528,0.535798369704479,0.673588117878509,0.788280363383256,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,1.72101972449288,0,0,1.06748995729705,1.48000529050296,0,0.942974704487816,0.326923806226917,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,2.80483547606892,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,10.2500177910362,5.55582615091933,4.37584550139576,0,0,0,0,0,0,0.335964256397719,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,2.87549826589899,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0.368738337083406,0,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,1.13733384070897,0.680374821106063,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.768760269460425,1.40373983744043,0.10115778085555,0.464845549297286,0,0,1.54016790088044,0.532306030317022,0.869932992075073,0.9266210955196,0.858749320451947,0,0,0.38126038784765,0,0,0,0,0.179872457583315,0,0,1.01091240786658,0,0,0,1.94970791705028,2.11300293513511,0,0,0,0,1.32687795048244,1.31535265576129,0,0,0.202910376962704,0,0,0,0,0.7133421029625,0,0,0,0,0,0.48111056362756,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0.19924798825107,0.276283915531148,0,0,0,0.933118762985422,0.269605053441981,0.358042349351218,0,0,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,1.82307289355202,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0.661983911750998,0.627865836814451,0,0,0,0,0,0,0.34945333648406,1.0319161948297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372757606696298,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0,1.43574604915363,0,0.429226048136571,0,0.335917362433631,0.720599767084807,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.961086713109252,1.72924735609633,0,0,0,0,0,1.08803560673895,0.7520696820681,1.22538230705385,0.983617892129413,0,0,0,0.1251909307065,0,0,0.372578417648301,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0.591420599958536,0,0,0,0,0.53168342911599,0.521745061811734,0,0.380805212168795,0,0.545545977607678,0,0.464033759878494,0.796191777397232,0,0,0,0,0,1.07220795687463,0.521988583930423,0,0,0.734210113519403,0,0,0,0.353378291891762,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,2.288292572803,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0.509781344063451,0.187967835959707,0.257831551894309,0.0999411559249289,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0.606351566874658,0,0.342233301085281,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,1.00267582127178,0.289693037921647,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0.993812036833525,0,1.38856200643038,0,1.67799774483962,0,0.417989933073621,0.258416759169329,2.13459757612026,2.67776490211736,3.62546385398232,0.760272105718513,1.95249646038536,0.735326160691737,2.43042584364528,0.535798369704479,0.673588117878509,0.788280363383256,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,1.72101972449288,0,0,1.06748995729705,1.48000529050296,0,0.942974704487816,0.326923806226917,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,2.80483547606892,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,10.2500177910362,5.55582615091933,4.37584550139576,0,0,0,0,0,0,0.335964256397719,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,2.87549826589899,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0.368738337083406,0,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,1.13733384070897,0.680374821106063,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.768760269460425,1.40373983744043,0.10115778085555,0.464845549297286,0,0,1.54016790088044,0.532306030317022,0.869932992075073,0.9266210955196,0.858749320451947,0,0,0.38126038784765,0,0,0,0,0.179872457583315,0,0,1.01091240786658,0,0,0,1.94970791705028,2.11300293513511,0,0,0,0,1.32687795048244,1.31535265576129,0,0,0.202910376962704,0,0,0,0,0.7133421029625,0,0,0,0,0,0.48111056362756,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0.19924798825107,0.276283915531148,0,0,0,0.933118762985422,0.269605053441981,0.358042349351218,0,0,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,1.82307289355202,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0.661983911750998,0.627865836814451,0,0,0,0,0,0,0.34945333648406,1.0319161948297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372757606696298,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0,1.43574604915363,0,0.429226048136571,0,0.335917362433631,0.720599767084807,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.961086713109252,1.72924735609633,0,0,0,0,0,1.08803560673895,0.7520696820681,1.22538230705385,0.983617892129413,0,0,0,0.1251909307065,0,0,0.372578417648301,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0.591420599958536,0,0,0,0,0.53168342911599,0.521745061811734,0,0.380805212168795,0,0.545545977607678,0,0.464033759878494,0.796191777397232,0,0,0,0,0,1.07220795687463,0.521988583930423,0,0,0.734210113519403,0,0,0,0.353378291891762,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,2.288292572803,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0.509781344063451,0.187967835959707,0.257831551894309,0.0999411559249289,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0.606351566874658,0,0.342233301085281,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p@chr12:109246574..109246585,- | |short_description=p@chr12:109246574..109246585,- | ||
}} | }} |
Latest revision as of 04:41, 24 July 2015
Short description: | p@chr12:109246574..109246585, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:109246574..109246585, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.89e-27 | 36 |
endothelial cell of vascular tree | 8.90e-26 | 24 |
meso-epithelial cell | 5.19e-24 | 45 |
lymphangioblast | 1.48e-23 | 6 |
endothelial cell of lymphatic vessel | 1.48e-23 | 6 |
vascular lymphangioblast | 1.48e-23 | 6 |
lining cell | 6.83e-18 | 58 |
barrier cell | 6.83e-18 | 58 |
smooth muscle cell of the subclavian artery | 2.44e-17 | 5 |
mesodermal cell | 5.46e-15 | 121 |
smooth muscle cell of the internal thoracic artery | 4.94e-12 | 2 |
blood vessel endothelial cell | 2.37e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.37e-10 | 18 |
capillary endothelial cell | 1.99e-08 | 3 |
embryonic cell | 6.19e-08 | 250 |