FFCP PHASE1:Hg19::chr12:45269119..45269133,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:45269119..45269133,- | |||
|coexpression_cluster_id=C1015 | |coexpression_cluster_id=C1015 | ||
|description=CAGE_peak_at_chr12:45269119..45269133,- | |description=CAGE_peak_at_chr12:45269119..45269133,- | ||
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|ontology_enrichment_celltype=CL:0000791!1.86e-13!18;CL:0000789!1.86e-13!18;CL:0002420!1.86e-13!18;CL:0002419!1.86e-13!18;CL:0000790!1.86e-13!18;CL:0000625!3.00e-11!11;CL:0000084!1.16e-08!25;CL:0000827!1.16e-08!25;CL:0000540!6.10e-07!6;CL:0000031!6.10e-07!6;CL:0000404!6.10e-07!6 | |ontology_enrichment_celltype=CL:0000791!1.86e-13!18;CL:0000789!1.86e-13!18;CL:0002420!1.86e-13!18;CL:0002419!1.86e-13!18;CL:0000790!1.86e-13!18;CL:0000625!3.00e-11!11;CL:0000084!1.16e-08!25;CL:0000827!1.16e-08!25;CL:0000540!6.10e-07!6;CL:0000031!6.10e-07!6;CL:0000404!6.10e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.39e-12;18!CL:0000789;1.39e-12;18!CL:0002419;1.39e-12;18!CL:0000625;1.03e-09;11!CL:0000084;6.56e-09;25 | |ontology_enrichment_celltype_v019=CL:0000791;1.39e-12;18!CL:0000789;1.39e-12;18!CL:0002419;1.39e-12;18!CL:0000625;1.03e-09;11!CL:0000084;6.56e-09;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.12e-12,18;CL:0000789,1.12e-12,18;CL:0002420,1.12e-12,18;CL:0002419,1.12e-12,18;CL:0000790,1.12e-12,18;CL:0000625,8.19e-10,11;CL:0000084,5.64e-09,25;CL:0000827,5.64e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.39e-12;18 | |ontology_enrichment_development_v019=CL:0000790;1.39e-12;18 | ||
|ontology_enrichment_disease=DOID:171!9.28e-07!10 | |ontology_enrichment_disease=DOID:171!9.28e-07!10 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.22e-33!94;UBERON:0001016!5.22e-33!94;UBERON:0001017!1.55e-32!82;UBERON:0005743!8.76e-32!86;UBERON:0001049!6.25e-31!57;UBERON:0005068!6.25e-31!57;UBERON:0006241!6.25e-31!57;UBERON:0007135!6.25e-31!57;UBERON:0007023!1.39e-29!115;UBERON:0000955!2.81e-28!69;UBERON:0006238!2.81e-28!69;UBERON:0002619!6.37e-28!22;UBERON:0002616!7.35e-28!59;UBERON:0001869!3.22e-27!32;UBERON:0002020!4.03e-27!34;UBERON:0003528!4.03e-27!34;UBERON:0001893!4.17e-27!34;UBERON:0002780!7.53e-27!41;UBERON:0001890!7.53e-27!41;UBERON:0006240!7.53e-27!41;UBERON:0003080!5.41e-26!42;UBERON:0002791!5.62e-26!33;UBERON:0001950!7.03e-25!20;UBERON:0000956!7.06e-24!25;UBERON:0000203!7.06e-24!25;UBERON:0002346!1.88e-22!90;UBERON:0003075!5.01e-20!86;UBERON:0007284!5.01e-20!86;UBERON:0003056!1.76e-17!61;UBERON:0000924!1.06e-15!173;UBERON:0006601!1.06e-15!173;UBERON:0000153!4.50e-15!129;UBERON:0007811!4.50e-15!129;UBERON:0004121!6.16e-14!169;UBERON:0000033!8.13e-14!123;UBERON:0000200!5.13e-10!6;UBERON:0001871!5.59e-10!7;UBERON:0001872!8.69e-09!5;UBERON:0000349!1.12e-08!5;UBERON:0004733!8.66e-07!12;UBERON:0002028!8.66e-07!12;UBERON:0007277!8.66e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!5.22e-33!94;UBERON:0001016!5.22e-33!94;UBERON:0001017!1.55e-32!82;UBERON:0005743!8.76e-32!86;UBERON:0001049!6.25e-31!57;UBERON:0005068!6.25e-31!57;UBERON:0006241!6.25e-31!57;UBERON:0007135!6.25e-31!57;UBERON:0007023!1.39e-29!115;UBERON:0000955!2.81e-28!69;UBERON:0006238!2.81e-28!69;UBERON:0002619!6.37e-28!22;UBERON:0002616!7.35e-28!59;UBERON:0001869!3.22e-27!32;UBERON:0002020!4.03e-27!34;UBERON:0003528!4.03e-27!34;UBERON:0001893!4.17e-27!34;UBERON:0002780!7.53e-27!41;UBERON:0001890!7.53e-27!41;UBERON:0006240!7.53e-27!41;UBERON:0003080!5.41e-26!42;UBERON:0002791!5.62e-26!33;UBERON:0001950!7.03e-25!20;UBERON:0000956!7.06e-24!25;UBERON:0000203!7.06e-24!25;UBERON:0002346!1.88e-22!90;UBERON:0003075!5.01e-20!86;UBERON:0007284!5.01e-20!86;UBERON:0003056!1.76e-17!61;UBERON:0000924!1.06e-15!173;UBERON:0006601!1.06e-15!173;UBERON:0000153!4.50e-15!129;UBERON:0007811!4.50e-15!129;UBERON:0004121!6.16e-14!169;UBERON:0000033!8.13e-14!123;UBERON:0000200!5.13e-10!6;UBERON:0001871!5.59e-10!7;UBERON:0001872!8.69e-09!5;UBERON:0000349!1.12e-08!5;UBERON:0004733!8.66e-07!12;UBERON:0002028!8.66e-07!12;UBERON:0007277!8.66e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.54e-17;22!UBERON:0000956;4.61e-15;25!UBERON:0000203;4.61e-15;25!UBERON:0001950;1.29e-14;20!UBERON:0001869;4.18e-11;32!UBERON:0002791;1.31e-10;32!UBERON:0002114;8.14e-10;2!UBERON:0001893;1.01e-09;34!UBERON:0003528;4.62e-09;34!UBERON:0002020;4.62e-09;34!UBERON:0003112;1.04e-07;1!UBERON:0011158;1.04e-07;1!UBERON:0003128;1.04e-07;1!UBERON:0001703;1.04e-07;1!UBERON:0002241;1.04e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0002619;3.54e-17;22!UBERON:0000956;4.61e-15;25!UBERON:0000203;4.61e-15;25!UBERON:0001950;1.29e-14;20!UBERON:0001869;4.18e-11;32!UBERON:0002791;1.31e-10;32!UBERON:0002114;8.14e-10;2!UBERON:0001893;1.01e-09;34!UBERON:0003528;4.62e-09;34!UBERON:0002020;4.62e-09;34!UBERON:0003112;1.04e-07;1!UBERON:0011158;1.04e-07;1!UBERON:0003128;1.04e-07;1!UBERON:0001703;1.04e-07;1!UBERON:0002241;1.04e-07;1 | ||
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|short_description=p@chr12:45269119..45269133,- | |short_description=p@chr12:45269119..45269133,- | ||
}} | }} |
Latest revision as of 08:33, 24 July 2015
Short description: | p@chr12:45269119..45269133, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:45269119..45269133, - |
Coexpression cluster: | C1015_occipital_neuroectodermal_temporal_parietal_duodenum_brain_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.12e-12 | 18 |
alpha-beta T cell | 1.12e-12 | 18 |
immature T cell | 1.12e-12 | 18 |
mature T cell | 1.12e-12 | 18 |
immature alpha-beta T cell | 1.12e-12 | 18 |
CD8-positive, alpha-beta T cell | 8.19e-10 | 11 |
T cell | 5.64e-09 | 25 |
pro-T cell | 5.64e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 3.16e-17 | 22 |
cerebral cortex | 4.17e-15 | 25 |
pallium | 4.17e-15 | 25 |
neocortex | 1.33e-14 | 20 |
nervous system | 6.88e-13 | 89 |
central nervous system | 1.27e-12 | 81 |
regional part of telencephalon | 1.18e-11 | 32 |
cerebral hemisphere | 1.18e-11 | 32 |
brain grey matter | 6.35e-11 | 34 |
gray matter | 6.35e-11 | 34 |
telencephalon | 6.35e-11 | 34 |
regional part of nervous system | 2.22e-10 | 53 |
regional part of brain | 2.22e-10 | 53 |
neural tube | 9.59e-10 | 56 |
neural rod | 9.59e-10 | 56 |
future spinal cord | 9.59e-10 | 56 |
neural keel | 9.59e-10 | 56 |
duodenum | 1.06e-09 | 2 |
brain | 2.45e-09 | 68 |
future brain | 2.45e-09 | 68 |
regional part of forebrain | 6.56e-09 | 41 |
forebrain | 6.56e-09 | 41 |
anterior neural tube | 6.56e-09 | 41 |
future forebrain | 6.56e-09 | 41 |
olfactory region | 9.10e-08 | 1 |
primary subdivision of skull | 9.10e-08 | 1 |
cranium | 9.10e-08 | 1 |
neurocranium | 9.10e-08 | 1 |
chondrocranium | 9.10e-08 | 1 |
cartilaginous neurocranium | 9.10e-08 | 1 |
head paraxial mesoderm | 9.10e-08 | 1 |
ectoderm-derived structure | 2.29e-07 | 171 |
ectoderm | 2.29e-07 | 171 |
presumptive ectoderm | 2.29e-07 | 171 |
neurectoderm | 3.91e-07 | 86 |