FFCP PHASE1:Hg19::chr12:45269119..45269133,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:45269119..45269133,- | |||
|coexpression_cluster_id=C1015 | |||
|description=CAGE_peak_at_chr12:45269119..45269133,- | |||
|id=chr12:45269119..45269133,- | |||
|ontology_enrichment_celltype=CL:0000791!1.86e-13!18;CL:0000789!1.86e-13!18;CL:0002420!1.86e-13!18;CL:0002419!1.86e-13!18;CL:0000790!1.86e-13!18;CL:0000625!3.00e-11!11;CL:0000084!1.16e-08!25;CL:0000827!1.16e-08!25;CL:0000540!6.10e-07!6;CL:0000031!6.10e-07!6;CL:0000404!6.10e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.39e-12;18!CL:0000789;1.39e-12;18!CL:0002419;1.39e-12;18!CL:0000625;1.03e-09;11!CL:0000084;6.56e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.12e-12,18;CL:0000789,1.12e-12,18;CL:0002420,1.12e-12,18;CL:0002419,1.12e-12,18;CL:0000790,1.12e-12,18;CL:0000625,8.19e-10,11;CL:0000084,5.64e-09,25;CL:0000827,5.64e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.39e-12;18 | |||
|ontology_enrichment_disease=DOID:171!9.28e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.22e-33!94;UBERON:0001016!5.22e-33!94;UBERON:0001017!1.55e-32!82;UBERON:0005743!8.76e-32!86;UBERON:0001049!6.25e-31!57;UBERON:0005068!6.25e-31!57;UBERON:0006241!6.25e-31!57;UBERON:0007135!6.25e-31!57;UBERON:0007023!1.39e-29!115;UBERON:0000955!2.81e-28!69;UBERON:0006238!2.81e-28!69;UBERON:0002619!6.37e-28!22;UBERON:0002616!7.35e-28!59;UBERON:0001869!3.22e-27!32;UBERON:0002020!4.03e-27!34;UBERON:0003528!4.03e-27!34;UBERON:0001893!4.17e-27!34;UBERON:0002780!7.53e-27!41;UBERON:0001890!7.53e-27!41;UBERON:0006240!7.53e-27!41;UBERON:0003080!5.41e-26!42;UBERON:0002791!5.62e-26!33;UBERON:0001950!7.03e-25!20;UBERON:0000956!7.06e-24!25;UBERON:0000203!7.06e-24!25;UBERON:0002346!1.88e-22!90;UBERON:0003075!5.01e-20!86;UBERON:0007284!5.01e-20!86;UBERON:0003056!1.76e-17!61;UBERON:0000924!1.06e-15!173;UBERON:0006601!1.06e-15!173;UBERON:0000153!4.50e-15!129;UBERON:0007811!4.50e-15!129;UBERON:0004121!6.16e-14!169;UBERON:0000033!8.13e-14!123;UBERON:0000200!5.13e-10!6;UBERON:0001871!5.59e-10!7;UBERON:0001872!8.69e-09!5;UBERON:0000349!1.12e-08!5;UBERON:0004733!8.66e-07!12;UBERON:0002028!8.66e-07!12;UBERON:0007277!8.66e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.54e-17;22!UBERON:0000956;4.61e-15;25!UBERON:0000203;4.61e-15;25!UBERON:0001950;1.29e-14;20!UBERON:0001869;4.18e-11;32!UBERON:0002791;1.31e-10;32!UBERON:0002114;8.14e-10;2!UBERON:0001893;1.01e-09;34!UBERON:0003528;4.62e-09;34!UBERON:0002020;4.62e-09;34!UBERON:0003112;1.04e-07;1!UBERON:0011158;1.04e-07;1!UBERON:0003128;1.04e-07;1!UBERON:0001703;1.04e-07;1!UBERON:0002241;1.04e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.16e-17,22;UBERON:0000956,4.17e-15,25;UBERON:0000203,4.17e-15,25;UBERON:0001950,1.33e-14,20;UBERON:0001016,6.88e-13,89;UBERON:0001017,1.27e-12,81;UBERON:0002791,1.18e-11,32;UBERON:0001869,1.18e-11,32;UBERON:0003528,6.35e-11,34;UBERON:0002020,6.35e-11,34;UBERON:0001893,6.35e-11,34;UBERON:0000073,2.22e-10,53;UBERON:0002616,2.22e-10,53;UBERON:0001049,9.59e-10,56;UBERON:0005068,9.59e-10,56;UBERON:0006241,9.59e-10,56;UBERON:0007135,9.59e-10,56;UBERON:0002114,1.06e-09,2;UBERON:0000955,2.45e-09,68;UBERON:0006238,2.45e-09,68;UBERON:0002780,6.56e-09,41;UBERON:0001890,6.56e-09,41;UBERON:0003080,6.56e-09,41;UBERON:0006240,6.56e-09,41;UBERON:0003112,9.10e-08,1;UBERON:0011158,9.10e-08,1;UBERON:0003128,9.10e-08,1;UBERON:0001703,9.10e-08,1;UBERON:0002241,9.10e-08,1;UBERON:0004761,9.10e-08,1;UBERON:0009617,9.10e-08,1;UBERON:0004121,2.29e-07,171;UBERON:0000924,2.29e-07,171;UBERON:0006601,2.29e-07,171;UBERON:0002346,3.91e-07,86 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.180258620683,2.75107533924415,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0,0.289803085735052,1.63115219478266,1.07016331235885,1.04535523804977,0.113309342697566,0.766440987203842,0.34362744548263,0,1.59282707162048,1.30216690771284,0,0.451725357233318,0.639933055772092,0,0.473554504088034,0.821127996921047,0.201606743224732,2.13952156626806,2.02754165435919,0,0,0,0.361439152384566,0,0,0,0,0,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,1.00509759200609,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.834912883456661,3.99227596002388,0,0,0,0,0,0,0,0.583209226766509,0.868124974666461,0,0.241192877250816,0,1.21637185924347,0.591095237907095,1.31631238292384,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,3.97894590119637,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,1.12990370390266,0,0,0.569797163602908,0,0.0801588202515337,0,0,0,0.229073192331831,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.953423842781029,0.321506296930038,0.412618309791701,0.83088067605837,0,0,0.121499113316049,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0.496166021811951,0,0,0.638341257770182,0,0,0,0,0.314108192500469,0.886068179966986,8.17575974843153,1.251909307065,1.14681839138014,0.554645257684261,0.0620964029413835,0.691743174681154,0,0,0,0,0.936669811613763,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,1.10086159299127,0.109209638192014,0.848662649770126,0.212574920101683,5.20530209887809,0.558644917973244,0,0,0,0,0,0.256916900385838,0,0.798169295285756,1.02558182120378,2.52071696221718,0.484100767249525,1.29180516505481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,1.56215619722769,0.620060389503552,0.443910671357348,3.28184885410932,0,0,0,0,0,0,0,0.682986574053893,0,0,0,0.0679697329768317,0.657727735628491,0,0,0.156986185701028,0.785577949580009,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0.475680363110274,0.5647304101948,0.879524133963433,0,0.385870790539723,0.437119121007915,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.203974470572744,6.54526035510566,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.310298987585686,0.213233981900981,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p@chr12:45269119..45269133,- | |||
}} |
Latest revision as of 08:33, 24 July 2015
Short description: | p@chr12:45269119..45269133, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:45269119..45269133, - |
Coexpression cluster: | C1015_occipital_neuroectodermal_temporal_parietal_duodenum_brain_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.12e-12 | 18 |
alpha-beta T cell | 1.12e-12 | 18 |
immature T cell | 1.12e-12 | 18 |
mature T cell | 1.12e-12 | 18 |
immature alpha-beta T cell | 1.12e-12 | 18 |
CD8-positive, alpha-beta T cell | 8.19e-10 | 11 |
T cell | 5.64e-09 | 25 |
pro-T cell | 5.64e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 3.16e-17 | 22 |
cerebral cortex | 4.17e-15 | 25 |
pallium | 4.17e-15 | 25 |
neocortex | 1.33e-14 | 20 |
nervous system | 6.88e-13 | 89 |
central nervous system | 1.27e-12 | 81 |
regional part of telencephalon | 1.18e-11 | 32 |
cerebral hemisphere | 1.18e-11 | 32 |
brain grey matter | 6.35e-11 | 34 |
gray matter | 6.35e-11 | 34 |
telencephalon | 6.35e-11 | 34 |
regional part of nervous system | 2.22e-10 | 53 |
regional part of brain | 2.22e-10 | 53 |
neural tube | 9.59e-10 | 56 |
neural rod | 9.59e-10 | 56 |
future spinal cord | 9.59e-10 | 56 |
neural keel | 9.59e-10 | 56 |
duodenum | 1.06e-09 | 2 |
brain | 2.45e-09 | 68 |
future brain | 2.45e-09 | 68 |
regional part of forebrain | 6.56e-09 | 41 |
forebrain | 6.56e-09 | 41 |
anterior neural tube | 6.56e-09 | 41 |
future forebrain | 6.56e-09 | 41 |
olfactory region | 9.10e-08 | 1 |
primary subdivision of skull | 9.10e-08 | 1 |
cranium | 9.10e-08 | 1 |
neurocranium | 9.10e-08 | 1 |
chondrocranium | 9.10e-08 | 1 |
cartilaginous neurocranium | 9.10e-08 | 1 |
head paraxial mesoderm | 9.10e-08 | 1 |
ectoderm-derived structure | 2.29e-07 | 171 |
ectoderm | 2.29e-07 | 171 |
presumptive ectoderm | 2.29e-07 | 171 |
neurectoderm | 3.91e-07 | 86 |