FFCP PHASE1:Hg19::chr12:76653611..76653630,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:76653611..76653630,+
|short_description=p1@ENST00000550380
|description=CAGE_peak_1_at_ENST00000550380_5end
|association_with_transcript=0bp_to_ENST000005...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000550380_5end | |||
|cluster_id=chr12:76653611..76653630,+ | |||
|description=CAGE_peak_1_at_ENST00000550380_5end | |||
|id=chr12:76653611..76653630,+ | |||
|ontology_enrichment_celltype=CL:0000222!2.19e-34!119;CL:0000220!7.36e-28!246;CL:0002321!5.40e-27!248;CL:0000055!1.31e-25!180;CL:0000680!2.93e-20!57;CL:0000056!2.93e-20!57;CL:0000355!2.93e-20!57;CL:0000183!7.83e-20!59;CL:0000187!8.42e-19!54;CL:0000192!9.22e-19!42;CL:0000514!9.22e-19!42;CL:0000359!1.39e-16!32;CL:0002139!7.26e-16!24;CL:0002371!1.52e-15!591;CL:0000115!5.95e-15!35;CL:0000393!1.21e-14!60;CL:0000211!1.21e-14!60;CL:0000144!1.52e-14!625;CL:0000057!2.29e-14!75;CL:0000213!1.19e-13!57;CL:0000215!1.19e-13!57;CL:0000071!6.57e-13!18;CL:0002546!6.57e-13!18;CL:0002078!2.32e-12!44;CL:0000076!1.03e-10!62;CL:0000548!1.15e-09!679;CL:0000004!1.15e-09!679;CL:0000255!1.15e-09!679;CL:0000012!4.33e-09!682;CL:1000413!1.27e-07!9;CL:0002539!1.73e-07!10;CL:0002620!7.26e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.88e-18;24!CL:0000359;7.69e-18;32!CL:0000192;2.40e-15;43!CL:0000115;2.44e-15;36!CL:0000071;1.46e-14;18!CL:0000187;1.35e-11;55!CL:0000213;2.32e-09;58!CL:0000215;2.32e-09;58!CL:0002078;1.15e-08;45!CL:1000413;1.65e-08;9!CL:0002539;2.33e-08;10!CL:0000393;5.27e-08;61!CL:0000211;5.27e-08;61!CL:0000057;6.23e-08;73!CL:0002620;9.39e-08;23!CL:0002494;1.82e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.42e-37,121;CL:0002321,1.65e-30,250;CL:0000680,1.70e-22,58;CL:0000056,1.70e-22,58;CL:0000355,1.70e-22,58;CL:0000192,2.59e-21,43;CL:0000514,2.59e-21,43;CL:0000187,7.82e-21,55;CL:0000359,8.95e-19,32;CL:0000115,3.39e-18,36;CL:0002139,5.97e-18,24;CL:0000393,1.17e-16,61;CL:0000211,1.17e-16,61;CL:0000057,2.43e-16,76;CL:0000213,2.67e-15,58;CL:0000215,2.67e-15,58;CL:0000071,1.46e-14,18;CL:0002546,1.46e-14,18;CL:0002078,4.81e-13,45;CL:0000076,6.58e-12,63;CL:1000413,1.65e-08,9;CL:0002539,2.36e-08,10;CL:0002620,1.21e-07,23;CL:0002494,1.78e-07,16;CL:0000723,3.60e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;2.40e-15;43!CL:0002546;1.46e-14;18!CL:0000355;7.82e-12;58!CL:0000222;1.18e-10;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.31e-33!79;UBERON:0007798!1.31e-33!79;UBERON:0000055!1.35e-30!69;UBERON:0004872!1.70e-28!84;UBERON:0001981!4.82e-27!60;UBERON:0007500!4.82e-27!60;UBERON:0004537!4.82e-27!60;UBERON:0006965!4.82e-27!60;UBERON:0000119!1.17e-25!312;UBERON:0004535!8.38e-25!110;UBERON:0000914!2.77e-24!83;UBERON:0002329!2.77e-24!83;UBERON:0003077!2.77e-24!83;UBERON:0003059!2.77e-24!83;UBERON:0007282!2.77e-24!83;UBERON:0009618!2.77e-24!83;UBERON:0007285!2.77e-24!83;UBERON:0000483!2.80e-24!309;UBERON:0001009!5.84e-24!113;UBERON:0000486!9.51e-24!82;UBERON:0004290!1.24e-22!70;UBERON:0001637!9.95e-22!42;UBERON:0003509!9.95e-22!42;UBERON:0004572!9.95e-22!42;UBERON:0003914!1.74e-21!118;UBERON:0000490!2.32e-21!138;UBERON:0005256!1.05e-19!143;UBERON:0000475!1.22e-19!365;UBERON:0001134!1.56e-19!61;UBERON:0002036!1.56e-19!61;UBERON:0003082!1.56e-19!61;UBERON:0002385!2.39e-18!63;UBERON:0001015!2.39e-18!63;UBERON:0000383!2.39e-18!63;UBERON:0004573!6.57e-17!33;UBERON:0004571!6.57e-17!33;UBERON:0004111!3.95e-16!241;UBERON:0002100!7.66e-16!216;UBERON:0000477!1.57e-15!286;UBERON:0001986!6.57e-13!18;UBERON:0004638!6.57e-13!18;UBERON:0004852!6.57e-13!18;UBERON:0000025!2.08e-12!194;UBERON:0000947!2.07e-11!21;UBERON:0010191!2.07e-11!21;UBERON:0000467!4.48e-11!625;UBERON:0003102!5.94e-11!95;UBERON:0000480!7.12e-11!626;UBERON:0000468!7.18e-11!659;UBERON:0000487!8.32e-11!22;UBERON:0000481!5.21e-10!347;UBERON:0002199!5.12e-09!45;UBERON:0002416!5.12e-09!45;UBERON:0006914!1.04e-08!25;UBERON:0002097!6.38e-08!40;UBERON:0003104!9.72e-08!238;UBERON:0009142!9.72e-08!238;UBERON:0003915!1.27e-07!9;UBERON:0004700!1.27e-07!9;UBERON:0001917!1.27e-07!9;UBERON:0004237!1.73e-07!10;UBERON:0004695!1.73e-07!10;UBERON:0002111!1.73e-07!10;UBERON:0004178!1.73e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.66e-18;42!UBERON:0003509;3.66e-18;42!UBERON:0004572;3.66e-18;42!UBERON:0004573;7.54e-18;33!UBERON:0004571;7.54e-18;33!UBERON:0007500;8.27e-18;56!UBERON:0001981;8.27e-18;56!UBERON:0004537;8.27e-18;56!UBERON:0000055;6.92e-17;65!UBERON:0002049;1.94e-15;75!UBERON:0007798;1.94e-15;75!UBERON:0004638;1.46e-14;18!UBERON:0001986;1.46e-14;18!UBERON:0004852;1.46e-14;18!UBERON:0000947;4.43e-13;21!UBERON:0010191;4.43e-13;21!UBERON:0003914;1.14e-12;74!UBERON:0000487;1.42e-12;22!UBERON:0000490;1.05e-10;33!UBERON:0006914;6.44e-10;25!UBERON:0003915;1.65e-08;9!UBERON:0004700;1.65e-08;9!UBERON:0001917;1.65e-08;9!UBERON:0004237;2.33e-08;10!UBERON:0004695;2.33e-08;10!UBERON:0002111;2.33e-08;10!UBERON:0004178;2.33e-08;10!UBERON:0004535;4.12e-08;109!UBERON:0000025;6.45e-08;93!UBERON:0001009;7.25e-08;112!UBERON:0002385;1.03e-07;31!UBERON:0001015;1.03e-07;31!UBERON:0000383;1.03e-07;31!UBERON:0002097;2.74e-07;41!UBERON:0003102;4.94e-07;50!UBERON:0001135;7.18e-07;15 | |||
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| ||
|short_description=p1@ENST00000550380 | |||
}} | }} |
Latest revision as of 12:28, 24 July 2015
Short description: | p1@ENST00000550380 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000550380_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000550380_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.42e-37 | 121 |
embryonic cell | 1.65e-30 | 250 |
muscle precursor cell | 1.70e-22 | 58 |
myoblast | 1.70e-22 | 58 |
multi-potent skeletal muscle stem cell | 1.70e-22 | 58 |
smooth muscle cell | 2.59e-21 | 43 |
smooth muscle myoblast | 2.59e-21 | 43 |
muscle cell | 7.82e-21 | 55 |
vascular associated smooth muscle cell | 8.95e-19 | 32 |
endothelial cell | 3.39e-18 | 36 |
endothelial cell of vascular tree | 5.97e-18 | 24 |
electrically responsive cell | 1.17e-16 | 61 |
electrically active cell | 1.17e-16 | 61 |
fibroblast | 2.43e-16 | 76 |
lining cell | 2.67e-15 | 58 |
barrier cell | 2.67e-15 | 58 |
blood vessel endothelial cell | 1.46e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.46e-14 | 18 |
meso-epithelial cell | 4.81e-13 | 45 |
squamous epithelial cell | 6.58e-12 | 63 |
endothelial cell of artery | 1.65e-08 | 9 |
aortic smooth muscle cell | 2.36e-08 | 10 |
skin fibroblast | 1.21e-07 | 23 |
cardiocyte | 1.78e-07 | 16 |
somatic stem cell | 3.60e-07 | 433 |