FFCP PHASE1:Hg19::chr13:31501193..31501196,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:31501193..31501196,+
|short_description=p@chr13:31501193..31501196,+
|description=CAGE_peak_at_chr13:31501193..31501196,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:31501193..31501196,+ | |||
|description=CAGE_peak_at_chr13:31501193..31501196,+ | |||
|id=chr13:31501193..31501196,+ | |||
|ontology_enrichment_celltype=CL:0000359!5.10e-15!32;CL:0000192!8.89e-12!42;CL:0000514!8.89e-12!42;CL:0002539!1.35e-11!10;CL:0000187!1.09e-10!54;CL:0000680!1.27e-10!57;CL:0000056!1.27e-10!57;CL:0000355!1.27e-10!57;CL:0000393!1.47e-10!60;CL:0000211!1.47e-10!60;CL:0000183!4.11e-09!59;CL:0000055!6.76e-09!180 | |||
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|ontology_enrichment_development_v019=CL:0000514;2.75e-15;43!CL:0000011;9.68e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;5.32e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,5.18e-07,3 | |||
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| ||
|short_description=p@chr13:31501193..31501196,+ | |||
}} | }} |
Latest revision as of 15:35, 24 July 2015
Short description: | p@chr13:31501193..31501196, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:31501193..31501196, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.48e-28 | 32 |
aortic smooth muscle cell | 6.33e-28 | 10 |
smooth muscle cell | 5.30e-20 | 43 |
smooth muscle myoblast | 5.30e-20 | 43 |
muscle cell | 6.88e-15 | 55 |
extracellular matrix secreting cell | 5.51e-14 | 15 |
muscle precursor cell | 6.07e-14 | 58 |
myoblast | 6.07e-14 | 58 |
multi-potent skeletal muscle stem cell | 6.07e-14 | 58 |
electrically responsive cell | 4.31e-13 | 61 |
electrically active cell | 4.31e-13 | 61 |
GAG secreting cell | 1.58e-12 | 9 |
carbohydrate secreting cell | 1.58e-12 | 9 |
cardiac mesenchymal cell | 7.09e-11 | 4 |
migratory trunk neural crest cell | 7.09e-11 | 4 |
stromal cell | 4.55e-09 | 28 |
smooth muscle cell of the subclavian artery | 8.73e-09 | 5 |
mesodermal cell | 7.40e-08 | 121 |
synovial cell | 2.92e-07 | 3 |
chondroblast | 3.16e-07 | 6 |
chondrocyte | 3.16e-07 | 6 |
hepatic stellate cell | 5.66e-07 | 3 |
cardiocyte | 9.46e-07 | 16 |
Ontology term | p-value | n |
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