FFCP PHASE1:Hg19::chr18:33058315..33058319,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:33058315..33058319,-
|short_description=p@chr18:33058315..33058319,-
|description=CAGE_peak_at_chr18:33058315..33058319,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:33058315..33058319,- | |||
|coexpression_cluster_id=C2458 | |||
|description=CAGE_peak_at_chr18:33058315..33058319,- | |||
|id=chr18:33058315..33058319,- | |||
|ontology_enrichment_celltype=CL:0000548!8.58e-17!679;CL:0000004!8.58e-17!679;CL:0000255!8.58e-17!679;CL:0000012!9.14e-17!682;CL:0000063!4.14e-14!578;CL:0000066!7.98e-13!254;CL:0002057!1.33e-12!42;CL:0000860!5.54e-12!45;CL:0002371!1.17e-11!591;CL:0000003!1.64e-11!722;CL:0000144!1.09e-10!625;CL:0002194!1.85e-09!63;CL:0000576!1.85e-09!63;CL:0000040!1.85e-09!63;CL:0000559!1.85e-09!63;CL:0002009!3.67e-09!65;CL:0000557!8.88e-08!71;CL:0000766!9.27e-08!76;CL:0000839!1.11e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.31e-15;33!CL:0002057;7.31e-15;33!CL:0000473;4.72e-11;39!CL:0000234;4.72e-11;39!CL:0002368;3.89e-09;13!CL:0000244;2.95e-08;4!CL:0000731;2.95e-08;4!CL:0002076;3.37e-08;42!CL:0000576;4.88e-08;48!CL:1000507;4.79e-07;10!CL:1000494;4.79e-07;10!CL:1000449;4.93e-07;15!CL:0002551;5.68e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.57e-16,42;CL:0002057,7.57e-16,42;CL:0000473,2.62e-14,48;CL:0000234,2.62e-14,48;CL:0000066,1.18e-12,253;CL:0002194,5.25e-10,59;CL:0000576,5.25e-10,59;CL:0000040,5.25e-10,59;CL:0000559,5.25e-10,59;CL:0002009,1.84e-09,61;CL:0002368,7.61e-09,13;CL:0002076,7.65e-09,42;CL:0000766,1.29e-08,72;CL:0000244,2.93e-08,4;CL:0000731,2.93e-08,4;CL:0000839,2.94e-08,66;CL:0000557,4.84e-08,67;CL:1000449,5.41e-07,15;CL:1000507,5.44e-07,10;CL:1000494,5.44e-07,10;CL:0002551,6.99e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;5.38e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.40e-08!80;UBERON:0004765!8.03e-08!101;UBERON:0001434!8.03e-08!101;UBERON:0001474!4.13e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;4.79e-07;10!UBERON:0009773;4.79e-07;10!UBERON:0001231;4.79e-07;10!UBERON:0004810;4.79e-07;10!UBERON:0006555;4.93e-07;15!UBERON:0004819;4.93e-07;15!UBERON:0001285;4.93e-07;15!UBERON:0007684;4.93e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005423,2.02e-09,581;UBERON:0000922,1.04e-08,592;UBERON:0002371,1.39e-08,76;UBERON:0001474,1.92e-07,82;UBERON:0001434,3.23e-07,100;UBERON:0002050,3.81e-07,564;UBERON:0004211,5.41e-07,15;UBERON:0009773,5.41e-07,15;UBERON:0001231,5.41e-07,15;UBERON:0001285,5.41e-07,15;UBERON:0007684,5.41e-07,15;UBERON:0004208,5.41e-07,15;UBERON:0004810,5.44e-07,10;UBERON:0004765,6.47e-07,90;UBERON:0000923,6.69e-07,560;UBERON:0010316,6.69e-07,560;UBERON:0005291,6.69e-07,560;UBERON:0006598,6.69e-07,560;UBERON:0010317,6.69e-07,560;UBERON:0002532,6.69e-07,560 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,0,1.39560233594486,2.83973783769224,1.58260186937072,0,0,0,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0.547497700291537,0.502170558379211,0.152826811495903,0.164201178899891,0.0787107813136792,0.786728553697808,1.53531759238885,2.16742572642506,8.27479102031034,4.51808878167375,7.39508020333575,0.0774672005803016,0,0,2.76997704265939,4.61252229181326,1.51907609501096,0,0,0,0.872389432677388,0,0,2.32429036905685,0.822335776043652,2.16794459626573,3.45230870786581,1.5369642391746,1.18241114944293,5.5159308917859,7.74581620300591,4.06279459783025,1.12945403725563,0.545812300115692,0.449446968890169,3.06083892370903,1.60464513538047,1.91801137739712,0.659702600373432,0.398927315243264,0.426224750532694,4.06292934080018,2.26954089876456,2.4912889959823,2.00998932205395,5.21482918420201,1.73751075764093,4.23779651843358,2.20966581592539,5.37986058649504,0,0.425208599930087,0,0.112328631146495,0.300353785683013,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0,0,0,0.560508562981536,0,0,0.786021525498329,0.411202997999018,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,2.43806866313962,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,1.98523116044542,6.20842312895179,1.05401742831751,0.0654895377488563,8.37879163072847,9.26961106961073,0.324547393654683,0.348259474598534,0.132957960518865,0.238490624305342,0,0.371457501329565,0.596287222100115,0,0.694281003215189,0,0.419499436209906,0.550236083880135,0,0.258416759169329,0.35576626268671,0.33472061276467,1.61131726843659,0,0,0,0,0.267899184852239,0,0.675668882899933,1.53316637465883,1.89853131913626,1.09921046358244,0,0,8.72188104285069,0.496971951695318,0.379891534993739,0.132409180813219,0,0,0,0,0,0,0.942974704487816,0.163461903113459,0.302714855289863,0.576175924479999,0.468642863667593,1.5608003841516,0,1.04614076386261,6.57633192405083,8.41739310714284,6.60118791500568,0.61246251376468,1.35117749042945,0.103325781175765,0,0,0,0.718618141816238,1.0100166837244,1.7516592782075,1.38532057742091,0,0.919463387397059,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,8.31021668602176,1.90922284413584,1.43402297694502,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.828147600278907,0.674338760312407,0.482022059766964,1.10293972732394,0.653638332277218,1.18635309555548,1.34831308160164,0.784885860501384,2.30848294167834,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0.245976877086227,2.74508496477641,11.3042793970884,3.37205259772859,6.43385423434437,5.09236448371913,0,1.03993478527958,0,1.85488647960123,0.587043471179108,0.288732895522148,0,0,0,0,0.246217006087397,0.702012795417713,0.148631162288728,0.93733833986777,6.71928512795438,0.708875486211932,3.58234090811393,5.52204483176528,2.30029607499127,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0.600686115687835,0,3.02753927732474,0.43596006883328,1.98013371716565,0,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0.65147236858747,0,0,0.301439377059586,0,0,0,0,2.10833939483032,1.91699884393266,0,1.42636905040718,0.289562613335158,0,0.179060963239896,0,0.985153801009636,0,0.256686072559497,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0.937131319941706,0,0,0,0.664225598535437,0,0,0.587403472388222,0.343143423810856,0,0,0.213455115606889,0.303127571446259,1.66435439510497,0,0.496215615637554,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0.0821271560138091,1.03850885836724,0,0.241718899183244,3.40860999515584,0.0920809889358963,0,0,0,4.06079651616671,4.46688955205606,0,1.46139224653261,1.16106791782163,0,3.57196781080683,0,0,0,0.501689773854853,1.52925763827023,7.47968408035852,2.23874754722178,0,0,2.05160100093111,0,0,0.309123034943167,0,0.082509499920588,0.574265537996172,1.30012049207304,0,0,1.23238893691716,0.460511024178389,1.65403886981437,0.107420244868274,0,0.767039646744908,0.178064071293475,1.15699440752685,1.34533047155574,10.0814042870721,0.10115778085555,0,0,0,0,0,0,0,0,1.86079184679834,0.632758849437452,0,0.255897791311334,0,0,0.78494864019923,0.359744915166629,0,0.353437207037059,0.202182481573316,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0.876901770507525,0,0,0,0,0.281695602532241,0.860468113224309,0.196498082026242,0,0.709522128141196,0,0.329294892959902,0,0,7.50532479258994,0.670302275535787,3.26672954583968,0.188287601553558,10.3321289441095,6.73885902670502,12.8594744525636,6.43225520579487,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0.213648142254946,0,0.980160863924127,0,0,0.0711418433484141,0,0,0,0.423347165447766,0.324621940274555,0,0,0.313359791546046,0,0,0,0,0.425846237690326,0,0,0,0,0.19538809540204,1.39203086947621,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0.284136146806413,0,0.29696468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| ||
|short_description=p@chr18:33058315..33058319,- | |||
}} | }} |
Latest revision as of 00:35, 26 July 2015
Short description: | p@chr18:33058315..33058319, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:33058315..33058319, - |
Coexpression cluster: | C2458_Small_Keratinocyte_CD14_Urothelial_nasal_Mammary_Mallassezderived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.57e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.57e-16 | 42 |
defensive cell | 2.62e-14 | 48 |
phagocyte | 2.62e-14 | 48 |
epithelial cell | 1.18e-12 | 253 |
monopoietic cell | 5.25e-10 | 59 |
monocyte | 5.25e-10 | 59 |
monoblast | 5.25e-10 | 59 |
promonocyte | 5.25e-10 | 59 |
macrophage dendritic cell progenitor | 1.84e-09 | 61 |
respiratory epithelial cell | 7.61e-09 | 13 |
endo-epithelial cell | 7.65e-09 | 42 |
myeloid leukocyte | 1.29e-08 | 72 |
transitional epithelial cell | 2.93e-08 | 4 |
urothelial cell | 2.93e-08 | 4 |
myeloid lineage restricted progenitor cell | 2.94e-08 | 66 |
granulocyte monocyte progenitor cell | 4.84e-08 | 67 |
epithelial cell of nephron | 5.41e-07 | 15 |
kidney tubule cell | 5.44e-07 | 10 |
nephron tubule epithelial cell | 5.44e-07 | 10 |
fibroblast of dermis | 6.99e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
developing anatomical structure | 2.02e-09 | 581 |
embryo | 1.04e-08 | 592 |
bone marrow | 1.39e-08 | 76 |
bone element | 1.92e-07 | 82 |
skeletal system | 3.23e-07 | 100 |
embryonic structure | 3.81e-07 | 564 |
nephron epithelium | 5.41e-07 | 15 |
renal tubule | 5.41e-07 | 15 |
nephron tubule | 5.41e-07 | 15 |
nephron | 5.41e-07 | 15 |
uriniferous tubule | 5.41e-07 | 15 |
nephrogenic mesenchyme | 5.41e-07 | 15 |
nephron tubule epithelium | 5.44e-07 | 10 |
skeletal element | 6.47e-07 | 90 |
germ layer | 6.69e-07 | 560 |
germ layer / neural crest | 6.69e-07 | 560 |
embryonic tissue | 6.69e-07 | 560 |
presumptive structure | 6.69e-07 | 560 |
germ layer / neural crest derived structure | 6.69e-07 | 560 |
epiblast (generic) | 6.69e-07 | 560 |