FFCP PHASE1:Hg19::chr18:3466261..3466312,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:3466261..3466312,+
|short_description=p@chr18:3466261..3466312,+
|description=CAGE_peak_at_chr18:3466261..3466312,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:3466261..3466312,+ | |||
|coexpression_cluster_id=C632 | |||
|description=CAGE_peak_at_chr18:3466261..3466312,+ | |||
|id=chr18:3466261..3466312,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.01e-24!180;CL:0000222!2.32e-20!119;CL:0000187!3.54e-15!54;CL:0000393!9.12e-15!60;CL:0000211!9.12e-15!60;CL:0000680!9.83e-15!57;CL:0000056!9.83e-15!57;CL:0000355!9.83e-15!57;CL:0000183!1.81e-14!59;CL:0000192!1.13e-13!42;CL:0000514!1.13e-13!42;CL:0002321!2.31e-13!248;CL:0000220!3.81e-13!246;CL:0000359!1.78e-11!32;CL:0000115!9.48e-11!35;CL:0002371!2.44e-09!591;CL:0002078!3.52e-09!44;CL:0002139!8.95e-09!24;CL:0000213!2.74e-08!57;CL:0000215!2.74e-08!57;CL:0000144!5.00e-08!625;CL:0000071!1.25e-07!18;CL:0002546!1.25e-07!18;CL:0000057!3.79e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000115;4.07e-13;36!CL:0000359;3.98e-11;32!CL:0000192;2.96e-09;43!CL:0002139;3.66e-09;24!CL:0000235;3.94e-09;6!CL:0000071;1.48e-08;18!CL:0002539;5.69e-08;10!CL:0002078;8.73e-08;45!CL:0000213;8.30e-07;58!CL:0000215;8.30e-07;58!CL:1000413;9.51e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.83e-17,121;CL:0000115,5.67e-14,36;CL:0000192,1.18e-12,43;CL:0000514,1.18e-12,43;CL:0002078,2.21e-12,45;CL:0000359,2.50e-11,32;CL:0002321,7.52e-11,250;CL:0000187,2.64e-10,55;CL:0000213,3.95e-10,58;CL:0000215,3.95e-10,58;CL:0000393,6.54e-10,61;CL:0000211,6.54e-10,61;CL:0000680,2.60e-09,58;CL:0000056,2.60e-09,58;CL:0000355,2.60e-09,58;CL:0002139,3.86e-09,24;CL:0000235,4.00e-09,6;CL:0000048,5.57e-09,427;CL:0000071,1.54e-08,18;CL:0002546,1.54e-08,18;CL:0000723,1.95e-08,433;CL:0002539,4.16e-08,10;CL:0000034,4.87e-08,441;CL:1000413,9.78e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000514;2.96e-09;43!CL:0002546;1.48e-08;18 | |||
|ontology_enrichment_disease=DOID:2394!4.97e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.43e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.08e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.58e-18!84;UBERON:0002049!5.32e-18!79;UBERON:0007798!5.32e-18!79;UBERON:0001981!5.65e-18!60;UBERON:0007500!5.65e-18!60;UBERON:0004537!5.65e-18!60;UBERON:0006965!5.65e-18!60;UBERON:0000055!2.29e-17!69;UBERON:0000914!9.28e-17!83;UBERON:0002329!9.28e-17!83;UBERON:0003077!9.28e-17!83;UBERON:0003059!9.28e-17!83;UBERON:0007282!9.28e-17!83;UBERON:0009618!9.28e-17!83;UBERON:0007285!9.28e-17!83;UBERON:0004290!1.75e-16!70;UBERON:0001637!5.36e-16!42;UBERON:0003509!5.36e-16!42;UBERON:0004572!5.36e-16!42;UBERON:0000486!1.99e-15!82;UBERON:0003914!5.11e-15!118;UBERON:0004535!1.53e-14!110;UBERON:0001009!7.92e-14!113;UBERON:0002385!2.89e-13!63;UBERON:0001015!2.89e-13!63;UBERON:0000383!2.89e-13!63;UBERON:0001134!6.03e-13!61;UBERON:0002036!6.03e-13!61;UBERON:0003082!6.03e-13!61;UBERON:0004573!9.67e-13!33;UBERON:0004571!9.67e-13!33;UBERON:0005256!1.52e-11!143;UBERON:0000947!3.61e-11!21;UBERON:0010191!3.61e-11!21;UBERON:0000490!4.24e-11!138;UBERON:0000119!2.53e-08!312;UBERON:0000926!2.62e-08!448;UBERON:0004120!2.62e-08!448;UBERON:0006603!2.62e-08!448;UBERON:0000483!4.06e-08!309;UBERON:0002100!4.30e-08!216;UBERON:0001986!1.25e-07!18;UBERON:0004638!1.25e-07!18;UBERON:0004852!1.25e-07!18;UBERON:0001135!1.28e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000947;5.17e-14;21!UBERON:0010191;5.17e-14;21!UBERON:0004573;1.28e-13;33!UBERON:0004571;1.28e-13;33!UBERON:0001637;1.05e-12;42!UBERON:0003509;1.05e-12;42!UBERON:0004572;1.05e-12;42!UBERON:0007500;1.68e-10;56!UBERON:0001981;1.68e-10;56!UBERON:0004537;1.68e-10;56!UBERON:0004638;1.48e-08;18!UBERON:0001986;1.48e-08;18!UBERON:0004852;1.48e-08;18!UBERON:0004237;5.69e-08;10!UBERON:0004695;5.69e-08;10!UBERON:0002111;5.69e-08;10!UBERON:0004178;5.69e-08;10!UBERON:0000055;6.97e-08;65!UBERON:0002049;1.09e-07;75!UBERON:0007798;1.09e-07;75!UBERON:0003914;2.41e-07;74!UBERON:0006914;6.91e-07;25!UBERON:0003915;9.51e-07;9!UBERON:0004700;9.51e-07;9!UBERON:0001917;9.51e-07;9 | |||
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| ||
|short_description=p@chr18:3466261..3466312,+ | |||
}} | }} |
Latest revision as of 00:43, 26 July 2015
Short description: | p@chr18:3466261..3466312, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:3466261..3466312, + |
Coexpression cluster: | C632_Monocytederived_Macrophage_Dendritic_CD14_Keratinocyte_basal_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.83e-17 | 121 |
endothelial cell | 5.67e-14 | 36 |
smooth muscle cell | 1.18e-12 | 43 |
smooth muscle myoblast | 1.18e-12 | 43 |
meso-epithelial cell | 2.21e-12 | 45 |
vascular associated smooth muscle cell | 2.50e-11 | 32 |
embryonic cell | 7.52e-11 | 250 |
muscle cell | 2.64e-10 | 55 |
lining cell | 3.95e-10 | 58 |
barrier cell | 3.95e-10 | 58 |
electrically responsive cell | 6.54e-10 | 61 |
electrically active cell | 6.54e-10 | 61 |
muscle precursor cell | 2.60e-09 | 58 |
myoblast | 2.60e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.60e-09 | 58 |
endothelial cell of vascular tree | 3.86e-09 | 24 |
macrophage | 4.00e-09 | 6 |
multi fate stem cell | 5.57e-09 | 427 |
blood vessel endothelial cell | 1.54e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.54e-08 | 18 |
somatic stem cell | 1.95e-08 | 433 |
aortic smooth muscle cell | 4.16e-08 | 10 |
stem cell | 4.87e-08 | 441 |
endothelial cell of artery | 9.78e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.08e-10 | 14 |