FFCP PHASE1:Hg19::chr1:150705526..150705571,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:150705526..150705571,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr1:150705526..150705571,- | |||
|id=chr1:150705526..150705571,- | |||
|ontology_enrichment_celltype=CL:0000738!1.54e-63!140;CL:0002009!2.79e-60!65;CL:0000766!1.88e-59!76;CL:0002087!2.49e-59!119;CL:0002194!2.72e-58!63;CL:0000576!2.72e-58!63;CL:0000040!2.72e-58!63;CL:0000559!2.72e-58!63;CL:0000037!1.04e-56!172;CL:0000566!1.04e-56!172;CL:0002032!5.67e-56!165;CL:0000837!5.67e-56!165;CL:0000557!2.71e-53!71;CL:0002031!1.46e-52!124;CL:0000988!1.19e-51!182;CL:0002057!3.69e-51!42;CL:0000839!2.72e-50!70;CL:0000763!3.44e-50!112;CL:0000049!3.44e-50!112;CL:0000860!1.38e-46!45;CL:0000134!2.16e-15!358;CL:0002320!1.74e-14!365;CL:0002393!2.62e-12!9;CL:0002397!2.62e-12!9;CL:0000219!8.47e-12!390;CL:0000048!3.61e-11!430;CL:0000723!1.40e-10!436;CL:0000034!7.89e-10!444;CL:0000094!6.92e-08!8;CL:0000990!1.95e-07!8;CL:0000542!3.23e-07!53;CL:0000051!3.23e-07!53;CL:0000840!3.54e-07!5;CL:0001029!3.54e-07!5;CL:0000838!8.19e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.95e-73;39!CL:0000234;1.95e-73;39!CL:0000860;1.37e-71;33!CL:0002057;1.37e-71;33!CL:0000576;9.60e-67;48!CL:0000766;1.98e-51;69!CL:0000763;3.03e-21;100!CL:0000235;4.65e-18;6!CL:0002393;1.27e-16;6!CL:0002397;1.27e-16;6!CL:0000738;1.45e-16;136!CL:0002087;4.05e-16;104!CL:0000775;5.22e-10;3!CL:0000875;1.33e-09;3!CL:0002396;1.33e-09;3!CL:0000988;1.44e-09;177!CL:0002619;4.05e-09;3!CL:0000094;6.72e-09;8!CL:0000219;1.02e-07;193!CL:0000840;7.09e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,5.10e-121,61;CL:0002194,7.36e-121,59;CL:0000576,7.36e-121,59;CL:0000040,7.36e-121,59;CL:0000559,7.36e-121,59;CL:0000473,7.46e-121,48;CL:0000234,7.46e-121,48;CL:0000766,1.88e-118,72;CL:0000557,4.15e-109,67;CL:0000839,8.69e-107,66;CL:0000860,1.55e-103,42;CL:0002057,1.55e-103,42;CL:0000763,2.55e-77,108;CL:0000049,2.55e-77,108;CL:0000738,1.35e-67,136;CL:0002087,2.27e-65,115;CL:0002031,1.00e-59,120;CL:0000037,6.02e-52,168;CL:0002032,6.16e-51,161;CL:0000837,6.16e-51,161;CL:0000988,1.47e-48,177;CL:0002393,1.58e-24,9;CL:0002397,1.58e-24,9;CL:0000134,1.44e-18,354;CL:0002320,6.49e-18,361;CL:0000235,6.88e-18,6;CL:0000219,1.30e-15,386;CL:0000048,1.62e-13,427;CL:0000723,4.06e-13,433;CL:0000034,1.33e-12,441;CL:0000775,5.00e-10,3;CL:0000875,1.38e-09,3;CL:0002396,1.38e-09,3;CL:0002619,4.60e-09,3;CL:0000094,6.14e-09,8;CL:0000840,8.59e-07,5;CL:0001029,8.59e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;9.19e-74;42!CL:0000049;2.49e-22;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.50e-57!112;UBERON:0002390!7.03e-57!102;UBERON:0003061!7.03e-57!102;UBERON:0002371!1.89e-46!80;UBERON:0001474!1.19e-41!86;UBERON:0002405!3.03e-38!115;UBERON:0004765!2.40e-33!101;UBERON:0001434!2.40e-33!101;UBERON:0003081!7.45e-20!216;UBERON:0002204!8.05e-15!167;UBERON:0002384!1.04e-13!375;UBERON:0000178!2.55e-10!15;UBERON:0000179!2.55e-10!15;UBERON:0000463!2.55e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.34e-15;15!UBERON:0000179;2.34e-15;15!UBERON:0000463;2.34e-15;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.74e-102,98;UBERON:0003061,6.74e-102,98;UBERON:0002371,1.01e-94,76;UBERON:0002193,3.63e-91,108;UBERON:0001474,7.26e-87,82;UBERON:0004765,5.31e-78,90;UBERON:0002405,4.57e-75,93;UBERON:0001434,6.76e-69,100;UBERON:0003081,1.14e-41,203;UBERON:0002204,7.09e-36,167;UBERON:0000926,1.58e-21,315;UBERON:0004120,1.58e-21,315;UBERON:0006603,1.58e-21,315;UBERON:0002384,5.06e-17,371;UBERON:0000178,3.11e-15,15;UBERON:0000179,3.11e-15,15;UBERON:0000463,3.11e-15,15;UBERON:0000923,5.89e-07,560;UBERON:0010316,5.89e-07,560;UBERON:0005291,5.89e-07,560;UBERON:0006598,5.89e-07,560;UBERON:0010317,5.89e-07,560;UBERON:0002532,5.89e-07,560;UBERON:0002050,8.44e-07,564 | |||
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| ||
|short_description=p@chr1:150705526..150705571,- | |||
}} | }} | ||
Latest revision as of 21:13, 27 July 2015
| Short description: | p@chr1:150705526..150705571, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr1:150705526..150705571, - |
| Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 6.74e-102 | 98 |
| blood island | 6.74e-102 | 98 |
| bone marrow | 1.01e-94 | 76 |
| hemolymphoid system | 3.63e-91 | 108 |
| bone element | 7.26e-87 | 82 |
| skeletal element | 5.31e-78 | 90 |
| immune system | 4.57e-75 | 93 |
| skeletal system | 6.76e-69 | 100 |
| lateral plate mesoderm | 1.14e-41 | 203 |
| musculoskeletal system | 7.09e-36 | 167 |
| mesoderm | 1.58e-21 | 315 |
| mesoderm-derived structure | 1.58e-21 | 315 |
| presumptive mesoderm | 1.58e-21 | 315 |
| connective tissue | 5.06e-17 | 371 |
| blood | 3.11e-15 | 15 |
| haemolymphatic fluid | 3.11e-15 | 15 |
| organism substance | 3.11e-15 | 15 |
| germ layer | 5.89e-07 | 560 |
| germ layer / neural crest | 5.89e-07 | 560 |
| embryonic tissue | 5.89e-07 | 560 |
| presumptive structure | 5.89e-07 | 560 |
| germ layer / neural crest derived structure | 5.89e-07 | 560 |
| epiblast (generic) | 5.89e-07 | 560 |
| embryonic structure | 8.44e-07 | 564 |