FFCP PHASE1:Hg19::chr1:160107625..160107629,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:160107625..160107629,+
|short_description=p@chr1:160107625..160107629,+
|description=CAGE_peak_at_chr1:160107625..160107629,+
|association_with_transcript=...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:160107625..160107629,+ | |||
|coexpression_cluster_id=C876 | |||
|description=CAGE_peak_at_chr1:160107625..160107629,+ | |||
|id=chr1:160107625..160107629,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.90e-11;3 | |||
|ontology_enrichment_disease=DOID:114!3.50e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;2.05e-15;2!DOID:1287;2.26e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.78e-15,2;DOID:1287,2.11e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.91e-62!57;UBERON:0005068!2.91e-62!57;UBERON:0006241!2.91e-62!57;UBERON:0007135!2.91e-62!57;UBERON:0007023!8.41e-54!115;UBERON:0001017!6.08e-51!82;UBERON:0005743!7.23e-51!86;UBERON:0002616!1.93e-49!59;UBERON:0001893!3.36e-49!34;UBERON:0000955!3.91e-49!69;UBERON:0006238!3.91e-49!69;UBERON:0002791!1.70e-46!33;UBERON:0000073!3.33e-45!94;UBERON:0001016!3.33e-45!94;UBERON:0002020!1.02e-44!34;UBERON:0003528!1.02e-44!34;UBERON:0001869!8.50e-44!32;UBERON:0002780!9.21e-44!41;UBERON:0001890!9.21e-44!41;UBERON:0006240!9.21e-44!41;UBERON:0003075!1.75e-43!86;UBERON:0007284!1.75e-43!86;UBERON:0003080!1.38e-42!42;UBERON:0002346!3.78e-41!90;UBERON:0002619!1.31e-33!22;UBERON:0003056!7.75e-30!61;UBERON:0000033!2.62e-29!123;UBERON:0000153!2.98e-29!129;UBERON:0007811!2.98e-29!129;UBERON:0000956!2.98e-29!25;UBERON:0000203!2.98e-29!25;UBERON:0001950!7.88e-28!20;UBERON:0004121!5.16e-24!169;UBERON:0000924!3.12e-23!173;UBERON:0006601!3.12e-23!173;UBERON:0003076!2.87e-20!15;UBERON:0003057!2.87e-20!15;UBERON:0002420!2.03e-17!9;UBERON:0007245!2.03e-17!9;UBERON:0010009!2.03e-17!9;UBERON:0010011!2.03e-17!9;UBERON:0000454!2.03e-17!9;UBERON:0002308!3.03e-17!9;UBERON:0000125!3.03e-17!9;UBERON:0009663!6.43e-17!7;UBERON:0000025!3.08e-15!194;UBERON:0000200!7.74e-14!6;UBERON:0004733!6.50e-13!12;UBERON:0002028!6.50e-13!12;UBERON:0007277!6.50e-13!12;UBERON:0004111!2.83e-12!241;UBERON:0004732!7.73e-12!13;UBERON:0000349!2.12e-11!5;UBERON:0000064!1.01e-10!219;UBERON:0002771!1.02e-10!3;UBERON:0002021!1.05e-10!5;UBERON:0000477!2.10e-10!286;UBERON:0001871!2.55e-10!7;UBERON:0002240!2.82e-10!3;UBERON:0002298!4.02e-10!8;UBERON:0000475!4.17e-09!365;UBERON:0002680!4.74e-09!9;UBERON:0001895!4.74e-09!9;UBERON:0010092!4.74e-09!9;UBERON:0000483!6.79e-09!309;UBERON:0000119!1.02e-08!312;UBERON:0000369!1.55e-08!4;UBERON:0002435!1.55e-08!4;UBERON:0000204!1.55e-08!4;UBERON:0010082!1.55e-08!4;UBERON:0001630!2.38e-08!2;UBERON:0005090!2.38e-08!2;UBERON:0001954!2.65e-08!2;UBERON:0003022!2.65e-08!2;UBERON:0002421!2.65e-08!2;UBERON:0002600!2.65e-08!2;UBERON:0000062!1.28e-07!511;UBERON:0001875!1.90e-07!2;UBERON:0006514!1.90e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;7.48e-30;1!UBERON:0000026;7.48e-30;1!UBERON:0008784;7.48e-30;1!UBERON:0006058;7.48e-30;1!UBERON:0003663;7.48e-30;1!UBERON:0004256;7.48e-30;1!UBERON:0004708;7.48e-30;1!UBERON:0002101;7.48e-30;1!UBERON:0004709;7.48e-30;1!UBERON:0002529;7.48e-30;1!UBERON:0010538;7.48e-30;1!UBERON:0003661;7.48e-30;1!UBERON:0010890;7.48e-30;1!UBERON:0002471;7.48e-30;1!UBERON:0001383;7.48e-30;1!UBERON:0010758;7.48e-30;1!UBERON:0010707;7.48e-30;1!UBERON:0000978;7.48e-30;1!UBERON:0002103;7.48e-30;1!UBERON:0001665;7.48e-30;1!UBERON:0003823;7.48e-30;1!UBERON:0000154;7.48e-30;1!UBERON:0010709;7.48e-30;1!UBERON:0005090;1.15e-15;2!UBERON:0001630;1.15e-15;2!UBERON:0001954;1.33e-15;2!UBERON:0003022;1.33e-15;2!UBERON:0002421;1.33e-15;2!UBERON:0002600;1.33e-15;2!UBERON:0001897;2.05e-15;2!UBERON:0010225;2.05e-15;2!UBERON:0002784;2.26e-08;4!UBERON:0002780;2.08e-07;41!UBERON:0001890;2.08e-07;41!UBERON:0000073;4.08e-07;53!UBERON:0002616;4.08e-07;53!UBERON:0000349;5.08e-07;5!UBERON:0001872;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,7.48e-30,1;UBERON:0001389,7.48e-30,1;UBERON:0000026,7.48e-30,1;UBERON:0008784,7.48e-30,1;UBERON:0006058,7.48e-30,1;UBERON:0003663,7.48e-30,1;UBERON:0004256,7.48e-30,1;UBERON:0004708,7.48e-30,1;UBERON:0002101,7.48e-30,1;UBERON:0004709,7.48e-30,1;UBERON:0002529,7.48e-30,1;UBERON:0010538,7.48e-30,1;UBERON:0003661,7.48e-30,1;UBERON:0010890,7.48e-30,1;UBERON:0002471,7.48e-30,1;UBERON:0001383,7.48e-30,1;UBERON:0004357,7.48e-30,1;UBERON:0004347,7.48e-30,1;UBERON:0005420,7.48e-30,1;UBERON:0005732,7.48e-30,1;UBERON:0010758,7.48e-30,1;UBERON:0010707,7.48e-30,1;UBERON:0000978,7.48e-30,1;UBERON:0002103,7.48e-30,1;UBERON:0001665,7.48e-30,1;UBERON:0003823,7.48e-30,1;UBERON:0000154,7.48e-30,1;UBERON:0010709,7.48e-30,1;UBERON:0005733,7.48e-30,1;UBERON:0005730,7.48e-30,1;UBERON:0005090,1.15e-15,2;UBERON:0001630,1.15e-15,2;UBERON:0001954,1.33e-15,2;UBERON:0003022,1.33e-15,2;UBERON:0002421,1.33e-15,2;UBERON:0002600,1.33e-15,2;UBERON:0001897,2.74e-15,2;UBERON:0010225,2.74e-15,2;UBERON:0007023,2.25e-12,114;UBERON:0000955,2.01e-10,68;UBERON:0006238,2.01e-10,68;UBERON:0000073,7.58e-09,53;UBERON:0002616,7.58e-09,53;UBERON:0001017,7.78e-09,81;UBERON:0001049,2.10e-08,56;UBERON:0005068,2.10e-08,56;UBERON:0006241,2.10e-08,56;UBERON:0007135,2.10e-08,56;UBERON:0002784,2.61e-08,4;UBERON:0001016,5.37e-08,89;UBERON:0000349,5.08e-07,5;UBERON:0001872,6.04e-07,5;UBERON:0002780,9.61e-07,41;UBERON:0001890,9.61e-07,41;UBERON:0003080,9.61e-07,41;UBERON:0006240,9.61e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,1.93866549219044,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,1.52581736317083,0.663475559587348,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0.471807930864739,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0.458320848023367,0,0.599037001496973,1.71690419254628,0,0,0,0,0,0,0,0,0,0.795229689809303,2.04305109167363,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0,0.998361463831671,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,0,0.798169295285756,0.205116364240755,0.504143392443436,0.138314504928436,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,1.65349437200947,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0.460409414939944,0,0,0,0.628462359664008,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,3.23714418593947,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.611923411718232,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03432995861895,0,0.23806443146374,0,0,0,0,0,0.870866991587845,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,1.93866549219044,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,1.52581736317083,0.663475559587348,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0.471807930864739,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0.458320848023367,0,0.599037001496973,1.71690419254628,0,0,0,0,0,0,0,0,0,0.795229689809303,2.04305109167363,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0,0.998361463831671,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,0,0.798169295285756,0.205116364240755,0.504143392443436,0.138314504928436,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,1.65349437200947,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0.460409414939944,0,0,0,0.628462359664008,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,3.23714418593947,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.611923411718232,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03432995861895,0,0.23806443146374,0,0,0,0,0,0.870866991587845,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:160107625..160107629,+ | |||
}} | }} |
Latest revision as of 23:15, 27 July 2015
Short description: | p@chr1:160107625..160107629, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:160107625..160107629, + |
Coexpression cluster: | C876_skeletal_spinal_medulla_hippocampus_parietal_thalamus_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.78e-15 | 2 |
cardiovascular system disease | 2.11e-08 | 4 |