FFCP PHASE1:Hg19::chr1:172926077..172926120,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:172926077..172926120,- | |||
|coexpression_cluster_id=C3834 | |||
|description=CAGE_peak_at_chr1:172926077..172926120,- | |description=CAGE_peak_at_chr1:172926077..172926120,- | ||
|id=chr1:172926077..172926120,- | |id=chr1:172926077..172926120,- | ||
|ontology_enrichment_celltype=CL:0000115!6.07e-59!35;CL:0002139!1.19e-58!24;CL:0002078!2.96e-46!44;CL:0000071!2.55e-40!18;CL:0002546!2.55e-40!18;CL:0000213!2.50e-39!57;CL:0000215!2.50e-39!57;CL:0002543!3.66e-32!6;CL:0002618!4.97e-24!3;CL:1000413!1.84e-20!9;CL:0002544!3.40e-20!6;CL:0005020!4.58e-20!6;CL:0002138!4.58e-20!6;CL:0005022!4.58e-20!6;CL:0000222!3.35e-19!119;CL:0000666!7.04e-18!4;CL:0002188!7.04e-18!4;CL:1000612!1.58e-17!7;CL:1000746!1.58e-17!7;CL:0000076!8.95e-13!62;CL:0002681!1.62e-09!13;CL:0002584!1.62e-09!13;CL:0000220!1.74e-09!246;CL:0002321!2.23e-09!248;CL:0000066!4.26e-08!254;CL:1000449!9.43e-08!16;CL:1000497!6.70e-07!18;CL:0002518!6.70e-07!18 | |ontology_enrichment_celltype=CL:0000115!6.07e-59!35;CL:0002139!1.19e-58!24;CL:0002078!2.96e-46!44;CL:0000071!2.55e-40!18;CL:0002546!2.55e-40!18;CL:0000213!2.50e-39!57;CL:0000215!2.50e-39!57;CL:0002543!3.66e-32!6;CL:0002618!4.97e-24!3;CL:1000413!1.84e-20!9;CL:0002544!3.40e-20!6;CL:0005020!4.58e-20!6;CL:0002138!4.58e-20!6;CL:0005022!4.58e-20!6;CL:0000222!3.35e-19!119;CL:0000666!7.04e-18!4;CL:0002188!7.04e-18!4;CL:1000612!1.58e-17!7;CL:1000746!1.58e-17!7;CL:0000076!8.95e-13!62;CL:0002681!1.62e-09!13;CL:0002584!1.62e-09!13;CL:0000220!1.74e-09!246;CL:0002321!2.23e-09!248;CL:0000066!4.26e-08!254;CL:1000449!9.43e-08!16;CL:1000497!6.70e-07!18;CL:0002518!6.70e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002618;2.69e-60;3!CL:0002543;1.69e-53;6!CL:0000115;1.57e-42;36!CL:0002139;3.36e-40;24!CL:0002188;6.67e-36;5!CL:0000071;7.42e-28;18!CL:1000746;6.85e-26;7!CL:1000612;6.85e-26;7!CL:0000213;1.15e-25;58!CL:0000215;1.15e-25;58!CL:0002078;1.75e-24;45!CL:0002681;2.01e-15;12!CL:0002584;2.01e-15;12!CL:0002138;4.53e-14;6!CL:1000449;1.78e-12;15!CL:1000497;4.38e-11;17!CL:0002518;4.38e-11;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,2.43e-60,3;CL:0000115,2.79e-54,36;CL:0002543,1.58e-53,6;CL:0002078,2.12e-43,45;CL:0002139,3.56e-40,24;CL:0002188,5.92e-36,5;CL:0000213,1.25e-33,58;CL:0000215,1.25e-33,58;CL:0000071,7.42e-28,18;CL:0002546,7.42e-28,18;CL:1000746,6.29e-26,7;CL:1000612,6.29e-26,7;CL:0000222,5.91e-16,121;CL:0002681,1.92e-15,12;CL:0002584,1.92e-15,12;CL:0005020,4.84e-14,6;CL:0002138,4.84e-14,6;CL:0005022,4.84e-14,6;CL:1000449,1.71e-12,15;CL:1000497,4.23e-11,17;CL:0002518,4.23e-11,17;CL:0000076,4.56e-08,63;CL:0002321,2.18e-07,250;CL:0000066,2.35e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;7.42e-28;18!CL:0005022;4.53e-14;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.55e-40!18;UBERON:0004638!2.55e-40!18;UBERON:0004852!2.55e-40!18;UBERON:0000487!1.06e-32!22;UBERON:0006914!1.38e-28!25;UBERON:0001638!2.05e-21!9;UBERON:0003920!2.05e-21!9;UBERON:0004582!2.05e-21!9;UBERON:0003915!1.84e-20!9;UBERON:0004700!1.84e-20!9;UBERON:0001917!1.84e-20!9;UBERON:0000055!1.00e-18!69;UBERON:0000074!1.58e-17!7;UBERON:0001229!1.58e-17!7;UBERON:0001230!1.58e-17!7;UBERON:0005749!1.58e-17!7;UBERON:0004199!1.58e-17!7;UBERON:0004209!1.58e-17!7;UBERON:0004198!1.58e-17!7;UBERON:0002049!5.03e-16!79;UBERON:0007798!5.03e-16!79;UBERON:0001473!4.15e-15!8;UBERON:0004536!4.15e-15!8;UBERON:0006558!4.15e-15!8;UBERON:0002066!1.18e-14!5;UBERON:0002465!3.99e-12!10;UBERON:0001981!5.95e-11!60;UBERON:0007500!5.95e-11!60;UBERON:0004537!5.95e-11!60;UBERON:0006965!5.95e-11!60;UBERON:0004535!9.00e-11!110;UBERON:0001009!2.04e-10!113;UBERON:0003914!6.39e-10!118;UBERON:0001225!1.62e-09!13;UBERON:0008987!1.62e-09!13;UBERON:0005418!9.74e-09!1;UBERON:0001389!9.74e-09!1;UBERON:0000026!9.74e-09!1;UBERON:0008784!9.74e-09!1;UBERON:0006058!9.74e-09!1;UBERON:0003663!9.74e-09!1;UBERON:0001383!9.74e-09!1;UBERON:0004256!9.74e-09!1;UBERON:0002529!9.74e-09!1;UBERON:0004708!9.74e-09!1;UBERON:0002101!9.74e-09!1;UBERON:0004709!9.74e-09!1;UBERON:0003661!9.74e-09!1;UBERON:0002471!9.74e-09!1;UBERON:0004357!9.74e-09!1;UBERON:0009872!9.74e-09!1;UBERON:0004347!9.74e-09!1;UBERON:0005420!9.74e-09!1;UBERON:0005732!9.74e-09!1;UBERON:0006057!9.74e-09!1;UBERON:0000978!9.74e-09!1;UBERON:0002103!9.74e-09!1;UBERON:0001665!9.74e-09!1;UBERON:0003823!9.74e-09!1;UBERON:0000154!9.74e-09!1;UBERON:0005733!9.74e-09!1;UBERON:0005730!9.74e-09!1;UBERON:0001851!9.43e-08!16;UBERON:0004211!9.43e-08!16;UBERON:0001285!9.43e-08!16;UBERON:0007684!9.43e-08!16;UBERON:0003220!9.43e-08!16;UBERON:0004208!9.43e-08!16;UBERON:0004111!1.26e-07!241;UBERON:0004872!2.36e-07!84;UBERON:0006555!2.66e-07!17;UBERON:0005103!2.66e-07!17;UBERON:0000083!2.66e-07!17;UBERON:0000353!2.66e-07!17;UBERON:0009201!2.66e-07!17;UBERON:0004819!2.66e-07!17;UBERON:0006553!2.66e-07!17;UBERON:0003074!2.66e-07!17;UBERON:0003060!2.66e-07!17;UBERON:0000080!6.70e-07!18;UBERON:0002120!6.70e-07!18;UBERON:0004875!6.70e-07!18;UBERON:0005721!6.70e-07!18;UBERON:0005754!6.70e-07!18;UBERON:0007297!6.70e-07!18;UBERON:0002113!9.63e-07!27;UBERON:0003918!9.63e-07!27;UBERON:0005095!9.63e-07!27;UBERON:0007687!9.63e-07!27 | |||
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|short_description=p@chr1:172926077..172926120,- | |short_description=p@chr1:172926077..172926120,- | ||
}} | }} |
Latest revision as of 00:28, 28 July 2015
Short description: | p@chr1:172926077..172926120, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:172926077..172926120, - |
Coexpression cluster: | C3834_Endothelial_Hepatic_Renal_Lymphatic_mature_lung_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 2.43e-60 | 3 |
endothelial cell | 2.79e-54 | 36 |
vein endothelial cell | 1.58e-53 | 6 |
meso-epithelial cell | 2.12e-43 | 45 |
endothelial cell of vascular tree | 3.56e-40 | 24 |
glomerular endothelial cell | 5.92e-36 | 5 |
lining cell | 1.25e-33 | 58 |
barrier cell | 1.25e-33 | 58 |
blood vessel endothelial cell | 7.42e-28 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.42e-28 | 18 |
glomerular cell | 6.29e-26 | 7 |
kidney corpuscule cell | 6.29e-26 | 7 |
mesodermal cell | 5.91e-16 | 121 |
kidney cortical cell | 1.92e-15 | 12 |
renal cortical epithelial cell | 1.92e-15 | 12 |
lymphangioblast | 4.84e-14 | 6 |
endothelial cell of lymphatic vessel | 4.84e-14 | 6 |
vascular lymphangioblast | 4.84e-14 | 6 |
epithelial cell of nephron | 1.71e-12 | 15 |
kidney cell | 4.23e-11 | 17 |
kidney epithelial cell | 4.23e-11 | 17 |
squamous epithelial cell | 4.56e-08 | 63 |
embryonic cell | 2.18e-07 | 250 |
epithelial cell | 2.35e-07 | 253 |