FFCP PHASE1:Hg19::chr5:138852090..138852095,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:138852090..138852095,+ | |||
|description=CAGE_peak_at_chr5:138852090..138852095,+ | |description=CAGE_peak_at_chr5:138852090..138852095,+ | ||
|id=chr5:138852090..138852095,+ | |id=chr5:138852090..138852095,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.16e-10!42;CL:0000860!5.61e-09!45;CL:0000839!4.33e-08!70;CL:0000557!6.97e-08!71;CL:0000766!1.10e-07!76 | |ontology_enrichment_celltype=CL:0002057!5.16e-10!42;CL:0000860!5.61e-09!45;CL:0000839!4.33e-08!70;CL:0000557!6.97e-08!71;CL:0000766!1.10e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000342;8.72e-18;1!CL:0002565;8.72e-18;1!CL:0002262;9.06e-10;2!CL:1000398;9.06e-10;2!CL:0002363;1.44e-09;2!CL:0002539;1.57e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000342,6.23e-18,1;CL:0002565,6.23e-18,1;CL:0002262,9.46e-10,2;CL:1000398,9.46e-10,2;CL:0002363,1.86e-09,2;CL:0000008,1.86e-09,2;CL:0002539,1.47e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000008;1.44e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.54e-08!80;UBERON:0001474!2.60e-07!86 | |ontology_enrichment_uberon=UBERON:0002371!9.54e-08!80;UBERON:0001474!2.60e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002506;8.72e-18;1!UBERON:0001769;8.72e-18;1!UBERON:0001801;3.24e-11;14!UBERON:0001281;9.06e-10;2!UBERON:0003497;9.06e-10;2!UBERON:0003909;9.06e-10;2!UBERON:0003835;9.06e-10;2!UBERON:0003566;1.44e-09;2!UBERON:0001777;1.44e-09;2!UBERON:0000019;2.03e-08;19!UBERON:0000047;2.03e-08;19!UBERON:0004088;2.03e-08;19!UBERON:0010230;2.03e-08;19!UBERON:0000970;5.03e-08;20!UBERON:0002104;1.14e-07;21!UBERON:0001456;1.14e-07;21!UBERON:0004237;1.57e-07;10!UBERON:0004695;1.57e-07;10!UBERON:0002111;1.57e-07;10!UBERON:0004178;1.57e-07;10!UBERON:0000020;4.78e-07;23!UBERON:0001280;6.32e-07;3!UBERON:0004647;6.32e-07;3!UBERON:0007625;6.35e-07;11!UBERON:0001032;8.94e-07;24!UBERON:0004456;8.94e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002506,6.23e-18,1;UBERON:0001769,6.23e-18,1;UBERON:0001801,2.92e-11,14;UBERON:0001281,9.46e-10,2;UBERON:0003497,9.46e-10,2;UBERON:0003909,9.46e-10,2;UBERON:0003835,9.46e-10,2;UBERON:0003566,1.86e-09,2;UBERON:0001777,1.86e-09,2;UBERON:0000019,4.68e-08,20;UBERON:0000047,4.68e-08,20;UBERON:0010312,4.68e-08,20;UBERON:0004088,4.68e-08,20;UBERON:0010230,4.68e-08,20;UBERON:0003072,4.68e-08,20;UBERON:0004128,4.68e-08,20;UBERON:0003071,4.68e-08,20;UBERON:0000970,1.07e-07,21;UBERON:0002104,1.07e-07,21;UBERON:0004237,1.47e-07,10;UBERON:0004695,1.47e-07,10;UBERON:0002111,1.47e-07,10;UBERON:0004178,1.47e-07,10;UBERON:0001456,2.26e-07,22;UBERON:0007625,5.31e-07,11;UBERON:0001280,6.50e-07,3;UBERON:0004647,6.50e-07,3;UBERON:0005171,6.50e-07,3;UBERON:0000020,8.42e-07,24;UBERON:0001032,8.42e-07,24;UBERON:0004456,8.42e-07,24 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,1.34465029290355,1.80808358407193,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0.436194716338694,0.755751887377619,0.242584061187816,0.929716147622738,0.411167888021826,0,0.28769239232215,0.768482119587302,0.236482229888585,0,0.645484683583826,1.35426486594342,0.376484679085209,0,0.224723484445085,0.306083892370903,0,0,0,0.997318288108159,0,0.580418477257168,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589211814949674,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.794455084879313,0,0,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0.113432183160021,0.179389635688862,0,0,0,0.206105058476878,0.257640540045629,0.18611685633159,1.35021065793013,0.0974370051611986,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0.464367928031979,0,0.354920400119532,0,0.482022059766964,0.220587945464788,0,0,0,0.196221465125346,0,0,2.80483547606892,0,0,0,0,0,0,0,1.3725424823882,0,0,0,0,0,1.03993478527958,0,1.97081688457631,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.621984346622316,0.720599767084807,0.75745460055828,0.317489471460845,0,0,0,0,0.300343057843917,1.14330573052231,0,0,0,0,0,0,0,0,0,2.83698264046557,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,3.44585807502342,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0.535286966391485,0.630809660135739,0.35142424497814,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0,0,0.717056761020258,0.982490410131212,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0,0,0.31900115973192,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0.306345576763462,0,0,0,0,0,0.573409195690071,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0.414706207840855,0,0,0,0.761610424337591,0,0,0.107410557042488,0.464033759878494,0.398095888698616,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0.371995018166751,0,0,0.252332849670158,0,0.126698501011437,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 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|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,1.34465029290355,1.80808358407193,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0.436194716338694,0.755751887377619,0.242584061187816,0.929716147622738,0.411167888021826,0,0.28769239232215,0.768482119587302,0.236482229888585,0,0.645484683583826,1.35426486594342,0.376484679085209,0,0.224723484445085,0.306083892370903,0,0,0,0.997318288108159,0,0.580418477257168,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589211814949674,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.794455084879313,0,0,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0.113432183160021,0.179389635688862,0,0,0,0.206105058476878,0.257640540045629,0.18611685633159,1.35021065793013,0.0974370051611986,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0.464367928031979,0,0.354920400119532,0,0.482022059766964,0.220587945464788,0,0,0,0.196221465125346,0,0,2.80483547606892,0,0,0,0,0,0,0,1.3725424823882,0,0,0,0,0,1.03993478527958,0,1.97081688457631,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.621984346622316,0.720599767084807,0.75745460055828,0.317489471460845,0,0,0,0,0.300343057843917,1.14330573052231,0,0,0,0,0,0,0,0,0,2.83698264046557,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,3.44585807502342,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0.535286966391485,0.630809660135739,0.35142424497814,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0,0,0.717056761020258,0.982490410131212,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0,0,0.31900115973192,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0.306345576763462,0,0,0,0,0,0.573409195690071,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0.414706207840855,0,0,0,0.761610424337591,0,0,0.107410557042488,0.464033759878494,0.398095888698616,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0.371995018166751,0,0,0.252332849670158,0,0.126698501011437,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr5:138852090..138852095,+ | |short_description=p@chr5:138852090..138852095,+ | ||
}} | }} |
Latest revision as of 10:23, 30 July 2015
Short description: | p@chr5:138852090..138852095, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:138852090..138852095, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell (sensu Vertebrata) | 6.23e-18 | 1 |
iris pigment epithelial cell | 6.23e-18 | 1 |
endothelial cell of sinusoid | 9.46e-10 | 2 |
endothelial cell of hepatic sinusoid | 9.46e-10 | 2 |
keratocyte | 1.86e-09 | 2 |
migratory cranial neural crest cell | 1.86e-09 | 2 |
aortic smooth muscle cell | 1.47e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
iris epithelium | 6.23e-18 | 1 |
iris | 6.23e-18 | 1 |
anterior segment of eyeball | 2.92e-11 | 14 |
hepatic sinusoid | 9.46e-10 | 2 |
abdomen blood vessel | 9.46e-10 | 2 |
sinusoid | 9.46e-10 | 2 |
abdominal segment blood vessel | 9.46e-10 | 2 |
head connective tissue | 1.86e-09 | 2 |
substantia propria of cornea | 1.86e-09 | 2 |
camera-type eye | 4.68e-08 | 20 |
simple eye | 4.68e-08 | 20 |
immature eye | 4.68e-08 | 20 |
ocular region | 4.68e-08 | 20 |
eyeball of camera-type eye | 4.68e-08 | 20 |
optic cup | 4.68e-08 | 20 |
optic vesicle | 4.68e-08 | 20 |
eye primordium | 4.68e-08 | 20 |
eye | 1.07e-07 | 21 |
visual system | 1.07e-07 | 21 |
blood vessel smooth muscle | 1.47e-07 | 10 |
arterial system smooth muscle | 1.47e-07 | 10 |
artery smooth muscle tissue | 1.47e-07 | 10 |
aorta smooth muscle tissue | 1.47e-07 | 10 |
face | 2.26e-07 | 22 |
pigment epithelium of eye | 5.31e-07 | 11 |
liver parenchyma | 6.50e-07 | 3 |
liver lobule | 6.50e-07 | 3 |
hepatic duct | 6.50e-07 | 3 |
sense organ | 8.42e-07 | 24 |
sensory system | 8.42e-07 | 24 |
entire sense organ system | 8.42e-07 | 24 |