FFCP PHASE1:Hg19::chr7:100781815..100781826,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:100781815..100781826,+ | |||
|description=CAGE_peak_at_chr7:100781815..100781826,+ | |description=CAGE_peak_at_chr7:100781815..100781826,+ | ||
|id=chr7:100781815..100781826,+ | |id=chr7:100781815..100781826,+ | ||
|ontology_enrichment_celltype=CL:0000222!1.20e-30!119;CL:0000680!8.49e-24!57;CL:0000056!8.49e-24!57;CL:0000355!8.49e-24!57;CL:0000187!1.77e-21!54;CL:0000183!5.75e-21!59;CL:0000192!5.90e-21!42;CL:0000514!5.90e-21!42;CL:0000359!8.83e-20!32;CL:0000055!1.18e-18!180;CL:0000393!5.42e-18!60;CL:0000211!5.42e-18!60;CL:0000144!1.80e-16!625;CL:0000220!3.65e-16!246;CL:0002321!8.20e-16!248;CL:0002371!9.99e-15!591;CL:0000548!9.95e-13!679;CL:0000004!9.95e-13!679;CL:0000255!9.95e-13!679;CL:0000012!1.91e-12!682;CL:0000213!1.59e-10!57;CL:0000215!1.59e-10!57;CL:0002139!3.83e-10!24;CL:0000723!2.19e-09!436;CL:0000048!2.74e-09!430;CL:0000003!6.77e-09!722;CL:0000034!1.19e-08!444;CL:0000057!1.68e-08!75;CL:0000115!2.50e-08!35;CL:0002539!1.75e-07!10;CL:0002078!5.84e-07!44 | |ontology_enrichment_celltype=CL:0000222!1.20e-30!119;CL:0000680!8.49e-24!57;CL:0000056!8.49e-24!57;CL:0000355!8.49e-24!57;CL:0000187!1.77e-21!54;CL:0000183!5.75e-21!59;CL:0000192!5.90e-21!42;CL:0000514!5.90e-21!42;CL:0000359!8.83e-20!32;CL:0000055!1.18e-18!180;CL:0000393!5.42e-18!60;CL:0000211!5.42e-18!60;CL:0000144!1.80e-16!625;CL:0000220!3.65e-16!246;CL:0002321!8.20e-16!248;CL:0002371!9.99e-15!591;CL:0000548!9.95e-13!679;CL:0000004!9.95e-13!679;CL:0000255!9.95e-13!679;CL:0000012!1.91e-12!682;CL:0000213!1.59e-10!57;CL:0000215!1.59e-10!57;CL:0002139!3.83e-10!24;CL:0000723!2.19e-09!436;CL:0000048!2.74e-09!430;CL:0000003!6.77e-09!722;CL:0000034!1.19e-08!444;CL:0000057!1.68e-08!75;CL:0000115!2.50e-08!35;CL:0002539!1.75e-07!10;CL:0002078!5.84e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002593;2.14e-14;2!CL:0000359;1.26e-13;32!CL:0002595;2.59e-12;5!CL:0002539;3.30e-10;10!CL:0002138;5.29e-10;6!CL:0002541;1.56e-09;3!CL:0000192;8.33e-09;43!CL:0000187;1.56e-08;55!CL:0000511;1.68e-07;1!CL:0002625;1.68e-07;1!CL:0002557;1.68e-07;1!CL:0000216;1.68e-07;1!CL:0002594;4.33e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.24e-18,121;CL:0000359,1.57e-14,32;CL:0002593,2.08e-14,2;CL:0000680,2.82e-13,58;CL:0000056,2.82e-13,58;CL:0000355,2.82e-13,58;CL:0000192,7.56e-13,43;CL:0000514,7.56e-13,43;CL:0002595,2.75e-12,5;CL:0000187,8.05e-12,55;CL:0000393,1.84e-10,61;CL:0000211,1.84e-10,61;CL:0002539,2.00e-10,10;CL:0005020,6.68e-10,6;CL:0002138,6.68e-10,6;CL:0005022,6.68e-10,6;CL:0002541,1.81e-09,3;CL:0000511,1.22e-07,1;CL:0002625,1.22e-07,1;CL:0000216,1.22e-07,1;CL:0000213,2.24e-07,58;CL:0000215,2.24e-07,58;CL:0002557,2.31e-07,1;CL:0002594,6.86e-07,4;CL:0002321,9.59e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000355;6.29e-11;58!CL:0005022;5.29e-10;6!CL:0000514;8.33e-09;43 | |||
|ontology_enrichment_disease=DOID:2394!1.19e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2513;7.02e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,8.28e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002049!2.24e-32!79;UBERON:0007798!2.24e-32!79;UBERON:0000055!3.00e-29!69;UBERON:0004535!1.44e-27!110;UBERON:0001009!3.23e-27!113;UBERON:0004872!1.33e-26!84;UBERON:0001981!9.90e-26!60;UBERON:0007500!9.90e-26!60;UBERON:0004537!9.90e-26!60;UBERON:0006965!9.90e-26!60;UBERON:0001637!1.35e-23!42;UBERON:0003509!1.35e-23!42;UBERON:0004572!1.35e-23!42;UBERON:0001134!2.84e-21!61;UBERON:0002036!2.84e-21!61;UBERON:0003082!2.84e-21!61;UBERON:0003914!3.50e-21!118;UBERON:0000486!5.37e-21!82;UBERON:0000914!2.94e-20!83;UBERON:0002329!2.94e-20!83;UBERON:0003077!2.94e-20!83;UBERON:0003059!2.94e-20!83;UBERON:0007282!2.94e-20!83;UBERON:0009618!2.94e-20!83;UBERON:0007285!2.94e-20!83;UBERON:0002385!3.86e-20!63;UBERON:0001015!3.86e-20!63;UBERON:0000383!3.86e-20!63;UBERON:0004290!7.26e-20!70;UBERON:0000490!1.18e-19!138;UBERON:0004573!2.93e-17!33;UBERON:0004571!2.93e-17!33;UBERON:0005256!4.93e-15!143;UBERON:0000483!7.18e-12!309;UBERON:0000119!1.72e-11!312;UBERON:0000947!6.68e-10!21;UBERON:0010191!6.68e-10!21;UBERON:0002100!1.68e-09!216;UBERON:0004111!1.31e-08!241;UBERON:0000477!1.44e-08!286;UBERON:0000025!2.47e-08!194;UBERON:0000926!2.90e-08!448;UBERON:0004120!2.90e-08!448;UBERON:0006603!2.90e-08!448;UBERON:0003081!6.10e-08!216;UBERON:0006914!6.85e-08!25;UBERON:0004237!1.75e-07!10;UBERON:0004695!1.75e-07!10;UBERON:0002111!1.75e-07!10;UBERON:0004178!1.75e-07!10;UBERON:0000467!2.86e-07!625;UBERON:0000480!3.40e-07!626;UBERON:0000487!3.66e-07!22;UBERON:0000468!4.10e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;6.66e-15;7!UBERON:0002456;2.14e-14;2!UBERON:0001473;6.64e-13;8!UBERON:0004536;6.64e-13;8!UBERON:0006558;6.64e-13;8!UBERON:0003834;2.59e-12;5!UBERON:0001533;2.59e-12;5!UBERON:0000055;2.81e-11;65!UBERON:0002465;2.37e-10;10!UBERON:0004237;3.30e-10;10!UBERON:0004695;3.30e-10;10!UBERON:0002111;3.30e-10;10!UBERON:0004178;3.30e-10;10!UBERON:0002049;3.71e-10;75!UBERON:0007798;3.71e-10;75!UBERON:0003124;1.56e-09;3!UBERON:0000920;1.56e-09;3!UBERON:0001637;3.23e-09;42!UBERON:0003509;3.23e-09;42!UBERON:0004572;3.23e-09;42!UBERON:0007500;1.15e-08;56!UBERON:0001981;1.15e-08;56!UBERON:0004537;1.15e-08;56!UBERON:0004573;3.70e-08;33!UBERON:0004571;3.70e-08;33!UBERON:0001136;1.68e-07;1!UBERON:0001343;1.68e-07;1!UBERON:0004910;1.68e-07;1!UBERON:0004813;1.68e-07;1!UBERON:0001310;4.33e-07;4!UBERON:0001135;7.73e-07;15 | |||
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| ||
|short_description=p@chr7:100781815..100781826,+ | |short_description=p@chr7:100781815..100781826,+ | ||
}} | }} |
Latest revision as of 04:18, 31 July 2015
Short description: | p@chr7:100781815..100781826, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:100781815..100781826, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.24e-18 | 121 |
vascular associated smooth muscle cell | 1.57e-14 | 32 |
smooth muscle cell of the internal thoracic artery | 2.08e-14 | 2 |
muscle precursor cell | 2.82e-13 | 58 |
myoblast | 2.82e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.82e-13 | 58 |
smooth muscle cell | 7.56e-13 | 43 |
smooth muscle myoblast | 7.56e-13 | 43 |
smooth muscle cell of the subclavian artery | 2.75e-12 | 5 |
muscle cell | 8.05e-12 | 55 |
electrically responsive cell | 1.84e-10 | 61 |
electrically active cell | 1.84e-10 | 61 |
aortic smooth muscle cell | 2.00e-10 | 10 |
lymphangioblast | 6.68e-10 | 6 |
endothelial cell of lymphatic vessel | 6.68e-10 | 6 |
vascular lymphangioblast | 6.68e-10 | 6 |
chorionic membrane mesenchymal stem cell | 1.81e-09 | 3 |
androgen binding protein secreting cell | 1.22e-07 | 1 |
seminiferous tubule epithelial cell | 1.22e-07 | 1 |
Sertoli cell | 1.22e-07 | 1 |
lining cell | 2.24e-07 | 58 |
barrier cell | 2.24e-07 | 58 |
fibroblast of pulmonary artery | 2.31e-07 | 1 |
smooth muscle cell of the umbilical artery | 6.86e-07 | 4 |
embryonic cell | 9.59e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 8.28e-08 | 1 |