FFCP PHASE1:Hg19::chr8:42033234..42033247,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:42033234..42033247,- | |||
|coexpression_cluster_id=C471 | |coexpression_cluster_id=C471 | ||
|description=CAGE_peak_at_chr8:42033234..42033247,- | |description=CAGE_peak_at_chr8:42033234..42033247,- | ||
|id=chr8:42033234..42033247,- | |id=chr8:42033234..42033247,- | ||
|ontology_enrichment_celltype=CL:0000192;2.22e-15;43!CL:0002504;1.19e-13;3!CL:1000279;1.19e-13;3!CL:1000280;1.19e-13;3!CL:0000359;3.71e-12;32!CL:0000187;1.76e-09;55!CL:0002595;6.17e-09;5!CL:0000393;4.66e-08;61!CL:0000211;4.66e-08;61!CL:0002539;1.87e-07;10 | |ontology_enrichment_celltype=CL:0000680!1.88e-16!57;CL:0000056!1.88e-16!57;CL:0000355!1.88e-16!57;CL:0000187!7.80e-16!54;CL:0000183!9.60e-16!59;CL:0000192!1.19e-15!42;CL:0000514!1.19e-15!42;CL:0000393!3.49e-14!60;CL:0000211!3.49e-14!60;CL:0000222!1.20e-12!119;CL:0000055!1.28e-12!180;CL:0000359!2.14e-10!32;CL:0000220!1.21e-07!246;CL:0002321!1.98e-07!248;CL:0002539!2.52e-07!10 | ||
| | |ontology_enrichment_celltype_v019=CL:0000192;2.22e-15;43!CL:0002504;1.19e-13;3!CL:1000279;1.19e-13;3!CL:1000280;1.19e-13;3!CL:0000359;3.71e-12;32!CL:0000187;1.76e-09;55!CL:0002595;6.17e-09;5!CL:0000393;4.66e-08;61!CL:0000211;4.66e-08;61!CL:0002539;1.87e-07;10 | ||
|ontology_enrichment_disease=DOID:0060084;1.93e-15;3!DOID:127;1.93e-15;3!DOID:0060072;1.08e-11;4!DOID:2394;5.40e-08;14 | |ontology_enrichment_celltype_v019_2=CL:0000192,3.10e-20,43;CL:0000514,3.10e-20,43;CL:0000187,2.24e-17,55;CL:0000680,2.75e-16,58;CL:0000056,2.75e-16,58;CL:0000355,2.75e-16,58;CL:0000393,2.62e-15,61;CL:0000211,2.62e-15,61;CL:0002504,1.55e-13,3;CL:1000279,1.55e-13,3;CL:1000280,1.55e-13,3;CL:0000359,1.70e-12,32;CL:0000222,3.05e-10,121;CL:0002595,4.60e-09,5;CL:0002539,1.97e-07,10;CL:0002622,9.92e-07,3 | ||
|ontology_enrichment_uberon=UBERON:0001135;1.06e-13;15!UBERON:0004573;2.12e-13;33!UBERON:0004571;2.12e-13;33!UBERON:0001637;2.48e-10;42!UBERON:0003509;2.48e-10;42!UBERON:0004572;2.48e-10;42!UBERON:0003834;6.17e-09;5!UBERON:0001533;6.17e-09;5!UBERON:0004237;1.87e-07;10!UBERON:0004695;1.87e-07;10!UBERON:0002111;1.87e-07;10!UBERON:0004178;1.87e-07;10!UBERON:0000947;2.91e-07;21!UBERON:0010191;2.91e-07;21 | |ontology_enrichment_development_v019=CL:0000514;2.22e-15;43!CL:0000355;1.33e-08;58 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.93e-15;3!DOID:127;1.93e-15;3!DOID:0060072;1.08e-11;4!DOID:2394;5.40e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.94e-15,3;DOID:127,1.94e-15,3;DOID:0060072,1.08e-11,4;DOID:2394,4.61e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!8.44e-16!83;UBERON:0002329!8.44e-16!83;UBERON:0003077!8.44e-16!83;UBERON:0003059!8.44e-16!83;UBERON:0007282!8.44e-16!83;UBERON:0009618!8.44e-16!83;UBERON:0007285!8.44e-16!83;UBERON:0005256!5.37e-15!143;UBERON:0001134!1.42e-14!61;UBERON:0002036!1.42e-14!61;UBERON:0003082!1.42e-14!61;UBERON:0002385!1.60e-14!63;UBERON:0001015!1.60e-14!63;UBERON:0000383!1.60e-14!63;UBERON:0004290!2.16e-14!70;UBERON:0002100!1.17e-11!216;UBERON:0000486!3.22e-11!82;UBERON:0001637!2.08e-10!42;UBERON:0003509!2.08e-10!42;UBERON:0004572!2.08e-10!42;UBERON:0004872!9.40e-10!84;UBERON:0001135!1.01e-09!15;UBERON:0000119!1.76e-09!312;UBERON:0002049!2.61e-09!79;UBERON:0007798!2.61e-09!79;UBERON:0004573!2.86e-09!33;UBERON:0004571!2.86e-09!33;UBERON:0000483!4.07e-09!309;UBERON:0003914!1.96e-08!118;UBERON:0000490!2.19e-08!138;UBERON:0000475!6.51e-08!365;UBERON:0001981!1.03e-07!60;UBERON:0007500!1.03e-07!60;UBERON:0004537!1.03e-07!60;UBERON:0006965!1.03e-07!60;UBERON:0000055!1.61e-07!69;UBERON:0000481!1.95e-07!347;UBERON:0004237!2.52e-07!10;UBERON:0004695!2.52e-07!10;UBERON:0002111!2.52e-07!10;UBERON:0004178!2.52e-07!10;UBERON:0004535!3.23e-07!110;UBERON:0001009!9.87e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0001135;1.06e-13;15!UBERON:0004573;2.12e-13;33!UBERON:0004571;2.12e-13;33!UBERON:0001637;2.48e-10;42!UBERON:0003509;2.48e-10;42!UBERON:0004572;2.48e-10;42!UBERON:0003834;6.17e-09;5!UBERON:0001533;6.17e-09;5!UBERON:0004237;1.87e-07;10!UBERON:0004695;1.87e-07;10!UBERON:0002111;1.87e-07;10!UBERON:0004178;1.87e-07;10!UBERON:0000947;2.91e-07;21!UBERON:0010191;2.91e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.30e-15,62;UBERON:0002036,5.30e-15,62;UBERON:0003082,5.30e-15,62;UBERON:0004573,1.24e-14,33;UBERON:0004571,1.24e-14,33;UBERON:0002385,2.02e-14,64;UBERON:0001015,2.02e-14,64;UBERON:0000383,2.02e-14,64;UBERON:0001135,1.27e-13,15;UBERON:0001637,2.71e-13,42;UBERON:0003509,2.71e-13,42;UBERON:0004572,2.71e-13,42;UBERON:0007503,9.74e-13,78;UBERON:0002329,1.21e-12,71;UBERON:0003059,1.21e-12,71;UBERON:0007282,1.21e-12,71;UBERON:0004290,1.21e-12,71;UBERON:0009618,1.21e-12,71;UBERON:0003077,2.03e-12,72;UBERON:0007285,2.03e-12,72;UBERON:0007524,3.36e-12,73;UBERON:0005256,2.91e-11,122;UBERON:0004872,1.78e-10,83;UBERON:0000486,2.64e-10,83;UBERON:0000490,1.54e-09,148;UBERON:0003834,4.60e-09,5;UBERON:0001533,4.60e-09,5;UBERON:0007500,9.51e-09,59;UBERON:0001981,9.51e-09,59;UBERON:0004537,9.51e-09,59;UBERON:0006965,9.51e-09,59;UBERON:0005156,1.14e-08,59;UBERON:0000990,1.14e-08,59;UBERON:0000926,2.61e-08,315;UBERON:0004120,2.61e-08,315;UBERON:0006603,2.61e-08,315;UBERON:0003104,1.70e-07,160;UBERON:0009142,1.70e-07,160;UBERON:0004237,1.97e-07,10;UBERON:0004695,1.97e-07,10;UBERON:0002111,1.97e-07,10;UBERON:0004178,1.97e-07,10;UBERON:0000947,2.68e-07,21;UBERON:0010191,2.68e-07,21;UBERON:0000055,2.83e-07,68;UBERON:0004122,3.00e-07,15;UBERON:0002049,3.64e-07,78;UBERON:0007798,3.64e-07,78 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,0.655324116390517,0.527533956456907,0,0.331397375727916,1.34465029290355,1.20538905604795,0,0.487932798790507,0.492484232307152,0.204000691244253,0,0,0.547497700291537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.759783069987479,0.794455084879313,6.88407889797153,1.77334191099179,0,0,0,0.311211035399766,0.269421344139376,0,0,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0.280901613404497,0,0.122834317311768,0,0,0.247266929278557,0,0.718618141816238,0.336672227908132,0.375355559615893,0,0,0,0.150238058906597,0.680593098960126,0,0,0,0,0,0,0,0,0,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3725424823882,0,0,0.100528972411631,0.277765335475589,0,0,0,0,0.469634776943287,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0.708875486211932,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.411309970813294,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,2.39344304926383,1.04007436911366,0,0,0.266422179016099,0.57191197463259,0,0,0,0.710783897485092,0,3.31583314765545,1.74306691720059,0.399891964728228,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,0.604780586659361,0.248107807818777,0.153461973288062,0.280660094433074,0.512556597022804,0,0.965123526861645,0,0.308419387605311,0.355123450626254,0.328508624055237,0,0.232420756919918,0,1.80455823272956,0,1.95184561879831,0.728364672026868,1.04899531967539,0,0.0770153371044148,0,0,0.316654886678627,0,0.340187410553031,0.215915916102139,0,0,1.00337954770971,0.509752546090077,0.831076008928724,0.895499018888713,0,0,0,0,0,0,0,0,0,0.650060246036521,1.6068392984416,0,0.154048617114644,0.307007349452259,0.551346289938122,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0.929691098594572,7.870308670766,0.6970372701606,0.924100740528266,2.66153015158511,0,1.48259375283136,0.572499546967965,0,0,0.762520775695299,0.511795582622668,0,0,2.35484592059769,1.2591072030832,1.64722217841633,1.06031162111118,0.404364963146632,0,0,0.48763373908959,3.89941583410055,0,0.545999645631943,3.81794666275024,6.78048699721457,0,1.99031692572366,6.13831239355268,0,0,0.202910376962704,0,0.281695602532241,0.573645408816206,0,0,1.06428319221179,0,0.329294892959902,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0.306806047506464,0,1.24415835064723,0.0898683511473268,0,0,0.493217028184668,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0.274083849293502,0,0.0633107959558787,0,0,0,0.799238438328521,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0.717149357331379,0,0,0,0,6.51599522104455,11.2348793856165,16.6559553655799,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0.285465333544967,5.64637967275612,0,0,0.298509605773748,0.233713309847224,0.554805861502613,0,0.754703705257725,0,0.228840068396924,2.11723293268535,0.310874401165561,0.147855149989634,0.318593534327405,0,0,5.80588690977198,1.32920857278997,2.60872530905867,0,6.09288339470073,0.813741466409323,0.181848659202559,0,0.464033759878494,1.99047944349308,1.60011105865261,0,0,0,0,0,0,0,0,0.489473409012935,0.179088841081487,0,0,1.59020231351293,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,2.1437183414724,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.982631505060581,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.464965701472501,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0,0.126166424835079,0,0,0.305966489225945,0,0,0,0.227336094654718,0,0.829169439458779,0,0.426467963801962,0,0,0,1.12131862580613,0.0636471582781649,0,0,0,0,0.286888821570705,0.332660356546013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| ||
|short_description=p@chr8:42033234..42033247,- | |short_description=p@chr8:42033234..42033247,- | ||
}} | }} |
Latest revision as of 18:28, 31 July 2015
Short description: | p@chr8:42033234..42033247, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:42033234..42033247, - |
Coexpression cluster: | C471_Smooth_Fibroblast_leiomyoma_mesenchymal_Mesothelial_meningioma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.10e-20 | 43 |
smooth muscle myoblast | 3.10e-20 | 43 |
muscle cell | 2.24e-17 | 55 |
muscle precursor cell | 2.75e-16 | 58 |
myoblast | 2.75e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.75e-16 | 58 |
electrically responsive cell | 2.62e-15 | 61 |
electrically active cell | 2.62e-15 | 61 |
enteric smooth muscle cell | 1.55e-13 | 3 |
smooth muscle cell of large intestine | 1.55e-13 | 3 |
smooth muscle cell of colon | 1.55e-13 | 3 |
vascular associated smooth muscle cell | 1.70e-12 | 32 |
mesodermal cell | 3.05e-10 | 121 |
smooth muscle cell of the subclavian artery | 4.60e-09 | 5 |
aortic smooth muscle cell | 1.97e-07 | 10 |
prostate stromal cell | 9.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.94e-15 | 3 |
leiomyoma | 1.94e-15 | 3 |
benign neoplasm | 1.08e-11 | 4 |
ovarian cancer | 4.61e-08 | 14 |