FFCP PHASE1:Mm9::chr10:9395623..9395645,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:9395623..9395645,-|id=chr10:9395623..9395645,-|ontology_enrichment_celltype=CL:0000540!9.48e-10!33;CL:0000047!9.48e-10!33;CL:0000031!9.48e-10!33;CL:0000404!9.48e-10!33;CL:0000221!1.67e-08!44;CL:0000133!1.67e-08!44;CL:0002319!4.52e-08!43;CL:0000393!9.40e-08!39;CL:0000211!9.40e-08!39;CL:0000107!2.08e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,2.63e-19,33;CL:0000047,2.63e-19,33;CL:0000031,2.63e-19,33;CL:0000404,2.63e-19,33;CL:0000393,2.63e-15,39;CL:0000211,2.63e-15,39;CL:0000107,2.43e-14,9;CL:0000221,3.71e-14,44;CL:0000133,3.71e-14,44;CL:0002319,2.84e-13,43;CL:0000117,3.11e-09,23;CL:0000337,3.11e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.73e-16!102;UBERON:0000924!1.73e-16!102;UBERON:0006601!1.73e-16!102;UBERON:0000073!5.17e-15!75;UBERON:0001016!5.17e-15!75;UBERON:0001017!5.66e-15!73;UBERON:0005743!5.66e-15!73;UBERON:0000033!2.76e-11!63;UBERON:0002346!6.02e-11!71;UBERON:0003075!6.02e-11!71;UBERON:0007284!6.02e-11!71;UBERON:0003056!6.23e-10!49;UBERON:0001049!2.28e-08!52;UBERON:0005068!2.28e-08!52;UBERON:0006241!2.28e-08!52;UBERON:0007135!2.28e-08!52;UBERON:0000955!3.18e-08!50;UBERON:0006238!3.18e-08!50;UBERON:0002616!5.40e-08!49;UBERON:0002410!2.08e-07!9;UBERON:0002020!2.70e-07!34;UBERON:0003080!3.91e-07!40;UBERON:0000010!7.67e-07!11;UBERON:0002780!8.76e-07!39;UBERON:0001890!8.76e-07!39;UBERON:0006240!8.76e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.40e-18,95;UBERON:0000924,2.40e-18,95;UBERON:0006601,2.40e-18,95;UBERON:0001017,9.37e-18,73;UBERON:0001016,5.13e-17,75;UBERON:0002410,2.43e-14,9;UBERON:0002346,2.10e-12,64;UBERON:0003075,2.10e-12,64;UBERON:0007284,2.10e-12,64;UBERON:0010371,8.51e-12,73;UBERON:0000010,2.56e-11,11;UBERON:0000073,5.21e-10,54;UBERON:0003056,9.85e-09,49;UBERON:0001049,1.60e-07,52;UBERON:0005068,1.60e-07,52;UBERON:0006241,1.60e-07,52;UBERON:0007135,1.60e-07,52;UBERON:0002020,4.82e-07,34;UBERON:0010314,4.89e-07,92|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0,0.65407546914134,0.439372365468944,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,1.61853168687678,3.1739458756322,0,0.677689064138264,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0,1.42825492201902,0.883474163806454,0,0,0,1.10115880999389,2.042997409363,1.84327839907492,5.53922408466814,5.03182039813253,3.64639359389732,0.279182999001381,1.12552522006336,0.30559649555362,1.47314292736834,1.85083185038834,2.05039390407831,0.37863096666592,0.226714680320357,0.289864488701678,0,0,0,0,0,0,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0.301445281105245,0,0,0.247194967734374,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.04853447583376,0.457500602818626,0.125654352112864,1.04294592115366,1.27857728665165,0.83115217823824,0.486723789203273,0.407357455401265,0,0.252722758433675,0.210441855886474,0.910843100738926,1.60931473103431,1.26043490863744,0.90422890701429,1.15662048557257,1.0249097622788,0.562210347358373,1.03481348295606,0,0.756424320671277,0.879755620819744,0.219195732427575,0.834141747676794,0.696504333044333,1.02891068203972,1.39323986772945,0,0,0,0.828503090142008,0.469052119962192,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0,0.146199987425332,0,0.134206418760372,0.630869845692382,0.514523061896422,0,0,1.2797295032114,2.09013004674395,1.28867461322093,0.605050573870028,0.667134131534611,0.380451252225118,0.474529061544512,0.329397909448022,0.502670417600539,0,0.19496408711912,0,0,0,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.316182685621286,0,0,0,0,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0,0.324270453550071,0,1.43768206527355,0,1.24815069245824,0,0,0,0.739012760666419,1.51593129416388,2.11854469374634,0.848725428875941,0.234690248288502,0.670025029767263,0,0.195133647857799,1.7339865851681,0.221464689648775,0.159454768657487,0,0.172684981865896,0.867894351489069,0,0,0,0,0.481651769963376,0.234423373184406,0,0,3.78609863299508,2.73307121007647,4.52389135238878,1.19484398976276,1.33679204449436,1.98153571552183,4.04810701674894,2.33804686329049,2.37172666767914,0.642642632843614,0,0.35613120733451,0.977321756121456,0.164970122972535,0,0.971122544619926,0,0,0,0.614870295887855,0,0.363533729477506,0.356497378384721,0,0,0,0,1.08036656418786,0.905510786479282,1.28602221018955,1.41872186913819,1.07021290561242,1.15184314421485,0,0.469343416127421,0,0,0.65954501176592,0.322928853391811,0.422190474497091,1.19372344003136,0.984845398470368,0,0,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0.276399947608848,0,1.10717597753397,1.21991680276109,0.648032044930808,0.627264888043406,1.09181281873089,0.40459303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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:9395623..9395645,- | |||
|description=CAGE_peak_at_chr10:9395623..9395645,- | |||
|id=chr10:9395623..9395645,- | |||
|ontology_enrichment_celltype=CL:0000540!9.48e-10!33;CL:0000047!9.48e-10!33;CL:0000031!9.48e-10!33;CL:0000404!9.48e-10!33;CL:0000221!1.67e-08!44;CL:0000133!1.67e-08!44;CL:0002319!4.52e-08!43;CL:0000393!9.40e-08!39;CL:0000211!9.40e-08!39;CL:0000107!2.08e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.63e-19,33;CL:0000047,2.63e-19,33;CL:0000031,2.63e-19,33;CL:0000404,2.63e-19,33;CL:0000393,2.63e-15,39;CL:0000211,2.63e-15,39;CL:0000107,2.43e-14,9;CL:0000221,3.71e-14,44;CL:0000133,3.71e-14,44;CL:0002319,2.84e-13,43;CL:0000117,3.11e-09,23;CL:0000337,3.11e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.73e-16!102;UBERON:0000924!1.73e-16!102;UBERON:0006601!1.73e-16!102;UBERON:0000073!5.17e-15!75;UBERON:0001016!5.17e-15!75;UBERON:0001017!5.66e-15!73;UBERON:0005743!5.66e-15!73;UBERON:0000033!2.76e-11!63;UBERON:0002346!6.02e-11!71;UBERON:0003075!6.02e-11!71;UBERON:0007284!6.02e-11!71;UBERON:0003056!6.23e-10!49;UBERON:0001049!2.28e-08!52;UBERON:0005068!2.28e-08!52;UBERON:0006241!2.28e-08!52;UBERON:0007135!2.28e-08!52;UBERON:0000955!3.18e-08!50;UBERON:0006238!3.18e-08!50;UBERON:0002616!5.40e-08!49;UBERON:0002410!2.08e-07!9;UBERON:0002020!2.70e-07!34;UBERON:0003080!3.91e-07!40;UBERON:0000010!7.67e-07!11;UBERON:0002780!8.76e-07!39;UBERON:0001890!8.76e-07!39;UBERON:0006240!8.76e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.40e-18,95;UBERON:0000924,2.40e-18,95;UBERON:0006601,2.40e-18,95;UBERON:0001017,9.37e-18,73;UBERON:0001016,5.13e-17,75;UBERON:0002410,2.43e-14,9;UBERON:0002346,2.10e-12,64;UBERON:0003075,2.10e-12,64;UBERON:0007284,2.10e-12,64;UBERON:0010371,8.51e-12,73;UBERON:0000010,2.56e-11,11;UBERON:0000073,5.21e-10,54;UBERON:0003056,9.85e-09,49;UBERON:0001049,1.60e-07,52;UBERON:0005068,1.60e-07,52;UBERON:0006241,1.60e-07,52;UBERON:0007135,1.60e-07,52;UBERON:0002020,4.82e-07,34;UBERON:0010314,4.89e-07,92 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0,0.65407546914134,0.439372365468944,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,1.61853168687678,3.1739458756322,0,0.677689064138264,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0,1.42825492201902,0.883474163806454,0,0,0,1.10115880999389,2.042997409363,1.84327839907492,5.53922408466814,5.03182039813253,3.64639359389732,0.279182999001381,1.12552522006336,0.30559649555362,1.47314292736834,1.85083185038834,2.05039390407831,0.37863096666592,0.226714680320357,0.289864488701678,0,0,0,0,0,0,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0.301445281105245,0,0,0.247194967734374,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.04853447583376,0.457500602818626,0.125654352112864,1.04294592115366,1.27857728665165,0.83115217823824,0.486723789203273,0.407357455401265,0,0.252722758433675,0.210441855886474,0.910843100738926,1.60931473103431,1.26043490863744,0.90422890701429,1.15662048557257,1.0249097622788,0.562210347358373,1.03481348295606,0,0.756424320671277,0.879755620819744,0.219195732427575,0.834141747676794,0.696504333044333,1.02891068203972,1.39323986772945,0,0,0,0.828503090142008,0.469052119962192,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0,0.146199987425332,0,0.134206418760372,0.630869845692382,0.514523061896422,0,0,1.2797295032114,2.09013004674395,1.28867461322093,0.605050573870028,0.667134131534611,0.380451252225118,0.474529061544512,0.329397909448022,0.502670417600539,0,0.19496408711912,0,0,0,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.316182685621286,0,0,0,0,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0,0.324270453550071,0,1.43768206527355,0,1.24815069245824,0,0,0,0.739012760666419,1.51593129416388,2.11854469374634,0.848725428875941,0.234690248288502,0.670025029767263,0,0.195133647857799,1.7339865851681,0.221464689648775,0.159454768657487,0,0.172684981865896,0.867894351489069,0,0,0,0,0.481651769963376,0.234423373184406,0,0,3.78609863299508,2.73307121007647,4.52389135238878,1.19484398976276,1.33679204449436,1.98153571552183,4.04810701674894,2.33804686329049,2.37172666767914,0.642642632843614,0,0.35613120733451,0.977321756121456,0.164970122972535,0,0.971122544619926,0,0,0,0.614870295887855,0,0.363533729477506,0.356497378384721,0,0,0,0,1.08036656418786,0.905510786479282,1.28602221018955,1.41872186913819,1.07021290561242,1.15184314421485,0,0.469343416127421,0,0,0.65954501176592,0.322928853391811,0.422190474497091,1.19372344003136,0.984845398470368,0,0,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0.276399947608848,0,1.10717597753397,1.21991680276109,0.648032044930808,0.627264888043406,1.09181281873089,0.404593039154462,0.495920734352016,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.337912250981556,0.234714477291508,0.13020438484395,0,0,0,0,1.01362607645082,0.308132871494482,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,0,0,0,0.386379188064381,0.750729901804728,0,0.214368379079066,0,1.12950368523413,1.38097570952153,2.86447756719698,0.859265911718438,0.685082519770642,1.5107877947794,0.675022500231806,1.80128481289688,0.906284817968409,2.5888015587591,0.518936737920883,1.99512436700516,1.36586884603307,0.243106717068294,0.419226325255965,0.367687016900028,0.44449345560323,0.412070114477788,0.320919209591815,1.26348605881899,0.50695859978048,0.377252682772152,0.561849044819294,0.512201219238954,0.34461281373368,0.476293691283074,0.231768651889711,0.964546102318525,0.412085900803307,1.47198920134397,0.685738504770831,1.06485483695602,0.715308569841963,0.290692833264657,0.564656282491984,0.592302255241736,0.365855945745545,0,0,0,0.118635018124174,0.492522411877817,0,0.154936841185966,0.578719832943424,1.24905288968973,0.467863216890817,0.429742108096597,0.382576664137687,0,0.463735671240843 | |||
|short_description=p@chr10:9395623..9395645,- | |||
}} |
Latest revision as of 01:24, 5 August 2015
Short description: | p@chr10:9395623..9395645, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:9395623..9395645, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.63e-19 | 33 |
neuronal stem cell | 2.63e-19 | 33 |
neuroblast | 2.63e-19 | 33 |
electrically signaling cell | 2.63e-19 | 33 |
electrically responsive cell | 2.63e-15 | 39 |
electrically active cell | 2.63e-15 | 39 |
autonomic neuron | 2.43e-14 | 9 |
ectodermal cell | 3.71e-14 | 44 |
neurectodermal cell | 3.71e-14 | 44 |
neural cell | 2.84e-13 | 43 |
CNS neuron (sensu Vertebrata) | 3.11e-09 | 23 |
neuroblast (sensu Vertebrata) | 3.11e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.40e-18 | 95 |
ectoderm | 2.40e-18 | 95 |
presumptive ectoderm | 2.40e-18 | 95 |
central nervous system | 9.37e-18 | 73 |
nervous system | 5.13e-17 | 75 |
autonomic nervous system | 2.43e-14 | 9 |
neurectoderm | 2.10e-12 | 64 |
neural plate | 2.10e-12 | 64 |
presumptive neural plate | 2.10e-12 | 64 |
ecto-epithelium | 8.51e-12 | 73 |
peripheral nervous system | 2.56e-11 | 11 |
regional part of nervous system | 5.21e-10 | 54 |
pre-chordal neural plate | 9.85e-09 | 49 |
neural tube | 1.60e-07 | 52 |
neural rod | 1.60e-07 | 52 |
future spinal cord | 1.60e-07 | 52 |
neural keel | 1.60e-07 | 52 |
gray matter | 4.82e-07 | 34 |
structure with developmental contribution from neural crest | 4.89e-07 | 92 |