FFCP PHASE1:Mm9::chr12:81216190..81216212,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=48 | |MCL_coexpression_id=48 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:81216190..81216212,- | |||
|description=CAGE_peak_at_chr12:81216190..81216212,- | |description=CAGE_peak_at_chr12:81216190..81216212,- | ||
|id=chr12:81216190..81216212,- | |id=chr12:81216190..81216212,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,9.21e-10,6;CL:0000556,9.21e-10,6;CL:0002031,2.14e-08,25;CL:0002320,1.18e-07,46;CL:0000134,1.18e-07,46;CL:0000945,1.20e-07,1;CL:0000236,1.20e-07,1;CL:0000826,1.20e-07,1;CL:0000839,1.24e-07,13;CL:0000213,1.38e-07,1;CL:0002078,1.38e-07,1;CL:0000115,1.38e-07,1;CL:0002262,1.38e-07,1;CL:1000398,1.38e-07,1;CL:0000815,2.43e-07,1;CL:0000792,2.43e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.18e-07,46;UBERON:0002394,1.38e-07,1;UBERON:0001281,1.38e-07,1;UBERON:0000353,1.38e-07,1;UBERON:0003497,1.38e-07,1;UBERON:0003909,1.38e-07,1;UBERON:0003928,1.38e-07,1;UBERON:0003835,1.38e-07,1;UBERON:0003513,1.38e-07,1;UBERON:0001280,1.38e-07,1;UBERON:0004647,1.38e-07,1;UBERON:0002294,1.38e-07,1;UBERON:0001173,1.38e-07,1;UBERON:0004912,1.38e-07,1;UBERON:0005171,1.38e-07,1;UBERON:0000029,3.20e-07,1;UBERON:0001097,3.20e-07,1;UBERON:0003968,3.20e-07,1;UBERON:0001467,3.20e-07,1;UBERON:0001153,3.67e-07,1;UBERON:0001045,3.67e-07,1 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.467225281191051,2.45334314538995,0.703943610758334,0.234064526321993,0.34243593645101,0.239316476986009,0.171200729931206,0.34968160967599,0.666219523631325,0.404950534779652,0,4.10100814965709,3.56497527374921,2.12194825899015,0.17008658030214,0.496454756004426,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0.837063261473815,0,0,1.76469446409304,1.36609096991689,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,9.73139115134871,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0.889294796111139,0,0,0.7104801149461,0.299600110518405,0.384218305321555,0,0.135005938331691,0,0,0.220868540951614,0,0.191690942036473,0,1.10115880999389,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,4.34796733052517,0,0,0,2.59910566979068,0,0.140444420131752,0.340860645156116,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0,2.07150306917737,0,0.173485326766136,0.608930956624282,0.461230994512117,0,0.23517741427141,0,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,1.86391761218122,0,0,0.510914110417183,0.838705871541442,0.599902730993408,0.127070227073065,0.299581278809645,0,0.125654352112864,0,0.255715457330331,0,0,0.305518091550949,0.248813941220186,0,0,0.130120442962704,0,0,0.30140963567143,0.136072998302656,0.384341160854549,0.0937017245597288,0,0.215567992932842,0,0,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0.710234206755631,0,0,0,0.268273401399619,0,0.329119699826961,0.492502392237286,0.0810688095458557,0.146199987425332,0.439100230582101,0,0,0.205809224758569,0,0.264450566663544,0,0.464473343720877,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.49095073923223,0.0632365371242573,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0,0,0,0.241177159752417,0,0,0.648540907100142,0,0,0,0,0,0,0.964887042726734,0.554259570499814,0,0,0,0,0.167506257441816,0.238043640886014,0.585400943573396,0.157635144106191,0.8858587585951,0.797273843287435,0.491589944147214,0.172684981865896,0.289298117163023,1.50791283939272,0,0,0.551873492609465,0,0,0,0,0,0,0.215423397732799,0.238968797952552,0.668396022247182,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0,0.35613120733451,0.651547837414304,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.258717367565509,0,0.354680467284547,0,0.329098041204242,0,0,0,0,0.32977250588296,0.161464426695906,0,0,0.164140899745061,0,0,0.683483523191411,0.82554747185289,0,0.188368457004691,0.820165366326151,0.228778173206523,1.5298058699447,0.839708713941948,1.10559979043539,0.954670618015114,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0,0,0,0.149516546043979,0,0,0.645799117388655,0.337912250981556,0.821500670520278,0,0.209718688851422,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0,0.201932899896295,0.15241361331,0.201652370273681,0.0974578807397524,0.192423683280659,0.350630706544707,0,0,0.0897138566094757,0,0,0.187682475451182,0,0.214368379079066,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0.588795680537589,0,0,0.238436189947321,0.145346416632329,0.376437521661322,0,0,0.526139422875686,0.135804113845862,0.561142271657738,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0.16787927191189,0.467225281191051,2.45334314538995,0.703943610758334,0.234064526321993,0.34243593645101,0.239316476986009,0.171200729931206,0.34968160967599,0.666219523631325,0.404950534779652,0,4.10100814965709,3.56497527374921,2.12194825899015,0.17008658030214,0.496454756004426,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0.837063261473815,0,0,1.76469446409304,1.36609096991689,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,9.73139115134871,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0.889294796111139,0,0,0.7104801149461,0.299600110518405,0.384218305321555,0,0.135005938331691,0,0,0.220868540951614,0,0.191690942036473,0,1.10115880999389,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,4.34796733052517,0,0,0,2.59910566979068,0,0.140444420131752,0.340860645156116,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0,2.07150306917737,0,0.173485326766136,0.608930956624282,0.461230994512117,0,0.23517741427141,0,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,1.86391761218122,0,0,0.510914110417183,0.838705871541442,0.599902730993408,0.127070227073065,0.299581278809645,0,0.125654352112864,0,0.255715457330331,0,0,0.305518091550949,0.248813941220186,0,0,0.130120442962704,0,0,0.30140963567143,0.136072998302656,0.384341160854549,0.0937017245597288,0,0.215567992932842,0,0,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0.710234206755631,0,0,0,0.268273401399619,0,0.329119699826961,0.492502392237286,0.0810688095458557,0.146199987425332,0.439100230582101,0,0,0.205809224758569,0,0.264450566663544,0,0.464473343720877,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.49095073923223,0.0632365371242573,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0,0,0,0.241177159752417,0,0,0.648540907100142,0,0,0,0,0,0,0.964887042726734,0.554259570499814,0,0,0,0,0.167506257441816,0.238043640886014,0.585400943573396,0.157635144106191,0.8858587585951,0.797273843287435,0.491589944147214,0.172684981865896,0.289298117163023,1.50791283939272,0,0,0.551873492609465,0,0,0,0,0,0,0.215423397732799,0.238968797952552,0.668396022247182,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0,0.35613120733451,0.651547837414304,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.258717367565509,0,0.354680467284547,0,0.329098041204242,0,0,0,0,0.32977250588296,0.161464426695906,0,0,0.164140899745061,0,0,0.683483523191411,0.82554747185289,0,0.188368457004691,0.820165366326151,0.228778173206523,1.5298058699447,0.839708713941948,1.10559979043539,0.954670618015114,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0,0,0,0.149516546043979,0,0,0.645799117388655,0.337912250981556,0.821500670520278,0,0.209718688851422,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0,0.201932899896295,0.15241361331,0.201652370273681,0.0974578807397524,0.192423683280659,0.350630706544707,0,0,0.0897138566094757,0,0,0.187682475451182,0,0.214368379079066,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0.588795680537589,0,0,0.238436189947321,0.145346416632329,0.376437521661322,0,0,0.526139422875686,0.135804113845862,0.561142271657738,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr12:81216190..81216212,- | |short_description=p@chr12:81216190..81216212,- | ||
}} | }} |
Latest revision as of 07:56, 5 August 2015
Short description: | p@chr12:81216190..81216212, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:81216190..81216212, - |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 9.21e-10 | 6 |
megakaryocyte | 9.21e-10 | 6 |
hematopoietic lineage restricted progenitor cell | 2.14e-08 | 25 |
connective tissue cell | 1.18e-07 | 46 |
mesenchymal cell | 1.18e-07 | 46 |
lymphocyte of B lineage | 1.20e-07 | 1 |
B cell | 1.20e-07 | 1 |
pro-B cell | 1.20e-07 | 1 |
myeloid lineage restricted progenitor cell | 1.24e-07 | 13 |
lining cell | 1.38e-07 | 1 |
meso-epithelial cell | 1.38e-07 | 1 |
endothelial cell | 1.38e-07 | 1 |
endothelial cell of sinusoid | 1.38e-07 | 1 |
endothelial cell of hepatic sinusoid | 1.38e-07 | 1 |
regulatory T cell | 2.43e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.43e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.18e-07 | 46 |
bile duct | 1.38e-07 | 1 |
hepatic sinusoid | 1.38e-07 | 1 |
parenchyma | 1.38e-07 | 1 |
abdomen blood vessel | 1.38e-07 | 1 |
sinusoid | 1.38e-07 | 1 |
digestive system duct | 1.38e-07 | 1 |
abdominal segment blood vessel | 1.38e-07 | 1 |
trunk blood vessel | 1.38e-07 | 1 |
liver parenchyma | 1.38e-07 | 1 |
liver lobule | 1.38e-07 | 1 |
biliary system | 1.38e-07 | 1 |
biliary tree | 1.38e-07 | 1 |
biliary bud | 1.38e-07 | 1 |
hepatic duct | 1.38e-07 | 1 |
lymph node | 3.20e-07 | 1 |
axillary lymph node | 3.20e-07 | 1 |
peripheral lymph node | 3.20e-07 | 1 |
shoulder | 3.20e-07 | 1 |
caecum | 3.67e-07 | 1 |
midgut | 3.67e-07 | 1 |