FFCP PHASE1:Mm9::chr11:107289384..107289396,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:107289384..107289396,-|id=chr11:107289384..107289396,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,3.04e-09,1;CL:0002078,3.04e-09,1;CL:0000115,3.04e-09,1;CL:0002262,3.04e-09,1;CL:1000398,3.04e-09,1;CL:0000057,3.65e-09,1;CL:0000632,3.65e-09,1;CL:0000625,6.33e-09,1;CL:0000355,8.22e-09,9;CL:0000182,3.23e-07,5|ontology_enrichment_disease=DOID:0060100!2.81e-08!3;DOID:4045!2.81e-08!3|ontology_enrichment_disease_v019_2=DOID:0060100,3.71e-25,3;DOID:4045,3.71e-25,3;DOID:0050686,6.34e-13,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.04e-09,1;UBERON:0001281,3.04e-09,1;UBERON:0000353,3.04e-09,1;UBERON:0003497,3.04e-09,1;UBERON:0003909,3.04e-09,1;UBERON:0003928,3.04e-09,1;UBERON:0003835,3.04e-09,1;UBERON:0003513,3.04e-09,1;UBERON:0001280,3.04e-09,1;UBERON:0004647,3.04e-09,1;UBERON:0002294,3.04e-09,1;UBERON:0001173,3.04e-09,1;UBERON:0004912,3.04e-09,1;UBERON:0005171,3.04e-09,1;UBERON:0001134,8.22e-09,9;UBERON:0002036,8.22e-09,9;UBERON:0002385,8.22e-09,9;UBERON:0000486,8.22e-09,9;UBERON:0007503,8.22e-09,9;UBERON:0001015,8.22e-09,9;UBERON:0002329,8.22e-09,9;UBERON:0003082,8.22e-09,9;UBERON:0003059,8.22e-09,9;UBERON:0007282,8.22e-09,9;UBERON:0004290,8.22e-09,9;UBERON:0009618,8.22e-09,9;UBERON:0005256,2.49e-08,45;UBERON:0000383,5.52e-08,10;UBERON:0007524,2.64e-07,11;UBERON:0003077,2.64e-07,11;UBERON:0007285,2.64e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0.171200729931206,0.174840804837995,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.805264057692,82.8215465195228,24.0820922227947,235.292595212406,61.4740936462601,21.8479658864019,0,0,0,0,0,0,0,0,0,0,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,7.53647670624362,3.44169550792555,2.03991400112325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0.599902730993408,0.127070227073065,0,0.457500602818626,0,0,0,0,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0.419854356970974,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr11:107289384..107289396,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:107289384..107289396,- | |||
|description=CAGE_peak_at_chr11:107289384..107289396,- | |||
|id=chr11:107289384..107289396,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,3.04e-09,1;CL:0002078,3.04e-09,1;CL:0000115,3.04e-09,1;CL:0002262,3.04e-09,1;CL:1000398,3.04e-09,1;CL:0000057,3.65e-09,1;CL:0000632,3.65e-09,1;CL:0000625,6.33e-09,1;CL:0000355,8.22e-09,9;CL:0000182,3.23e-07,5 | |||
|ontology_enrichment_disease=DOID:0060100!2.81e-08!3;DOID:4045!2.81e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.71e-25,3;DOID:4045,3.71e-25,3;DOID:0050686,6.34e-13,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.04e-09,1;UBERON:0001281,3.04e-09,1;UBERON:0000353,3.04e-09,1;UBERON:0003497,3.04e-09,1;UBERON:0003909,3.04e-09,1;UBERON:0003928,3.04e-09,1;UBERON:0003835,3.04e-09,1;UBERON:0003513,3.04e-09,1;UBERON:0001280,3.04e-09,1;UBERON:0004647,3.04e-09,1;UBERON:0002294,3.04e-09,1;UBERON:0001173,3.04e-09,1;UBERON:0004912,3.04e-09,1;UBERON:0005171,3.04e-09,1;UBERON:0001134,8.22e-09,9;UBERON:0002036,8.22e-09,9;UBERON:0002385,8.22e-09,9;UBERON:0000486,8.22e-09,9;UBERON:0007503,8.22e-09,9;UBERON:0001015,8.22e-09,9;UBERON:0002329,8.22e-09,9;UBERON:0003082,8.22e-09,9;UBERON:0003059,8.22e-09,9;UBERON:0007282,8.22e-09,9;UBERON:0004290,8.22e-09,9;UBERON:0009618,8.22e-09,9;UBERON:0005256,2.49e-08,45;UBERON:0000383,5.52e-08,10;UBERON:0007524,2.64e-07,11;UBERON:0003077,2.64e-07,11;UBERON:0007285,2.64e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0.171200729931206,0.174840804837995,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.805264057692,82.8215465195228,24.0820922227947,235.292595212406,61.4740936462601,21.8479658864019,0,0,0,0,0,0,0,0,0,0,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,7.53647670624362,3.44169550792555,2.03991400112325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0.599902730993408,0.127070227073065,0,0.457500602818626,0,0,0,0,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0.419854356970974,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr11:107289384..107289396,- | |||
}} |
Latest revision as of 08:24, 5 August 2015
Short description: | p@chr11:107289384..107289396, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:107289384..107289396, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 3.04e-09 | 1 |
meso-epithelial cell | 3.04e-09 | 1 |
endothelial cell | 3.04e-09 | 1 |
endothelial cell of sinusoid | 3.04e-09 | 1 |
endothelial cell of hepatic sinusoid | 3.04e-09 | 1 |
fibroblast | 3.65e-09 | 1 |
hepatic stellate cell | 3.65e-09 | 1 |
CD8-positive, alpha-beta T cell | 6.33e-09 | 1 |
multi-potent skeletal muscle stem cell | 8.22e-09 | 9 |
hepatocyte | 3.23e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bile duct | 3.04e-09 | 1 |
hepatic sinusoid | 3.04e-09 | 1 |
parenchyma | 3.04e-09 | 1 |
abdomen blood vessel | 3.04e-09 | 1 |
sinusoid | 3.04e-09 | 1 |
digestive system duct | 3.04e-09 | 1 |
abdominal segment blood vessel | 3.04e-09 | 1 |
trunk blood vessel | 3.04e-09 | 1 |
liver parenchyma | 3.04e-09 | 1 |
liver lobule | 3.04e-09 | 1 |
biliary system | 3.04e-09 | 1 |
biliary tree | 3.04e-09 | 1 |
biliary bud | 3.04e-09 | 1 |
hepatic duct | 3.04e-09 | 1 |
skeletal muscle tissue | 8.22e-09 | 9 |
striated muscle tissue | 8.22e-09 | 9 |
muscle tissue | 8.22e-09 | 9 |
multilaminar epithelium | 8.22e-09 | 9 |
epithelial vesicle | 8.22e-09 | 9 |
musculature | 8.22e-09 | 9 |
somite | 8.22e-09 | 9 |
myotome | 8.22e-09 | 9 |
presomitic mesoderm | 8.22e-09 | 9 |
presumptive segmental plate | 8.22e-09 | 9 |
dermomyotome | 8.22e-09 | 9 |
trunk paraxial mesoderm | 8.22e-09 | 9 |
trunk mesenchyme | 2.49e-08 | 45 |
musculature of body | 5.52e-08 | 10 |
dense mesenchyme tissue | 2.64e-07 | 11 |
paraxial mesoderm | 2.64e-07 | 11 |
presumptive paraxial mesoderm | 2.64e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.71e-25 | 3 |
muscle cancer | 3.71e-25 | 3 |
organ system cancer | 6.34e-13 | 6 |