FFCP PHASE1:Mm9::chr11:30549364..30549374,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:30549364..30549374,-
|short_description=p@chr11:30549364..30549374,-
|description=CAGE_peak_at_chr11:30549364..30549374,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=311 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:30549364..30549374,- | |||
|description=CAGE_peak_at_chr11:30549364..30549374,- | |||
|id=chr11:30549364..30549374,- | |||
|ontology_enrichment_celltype=CL:0000055!1.13e-07!50;CL:0000393!2.54e-07!39;CL:0000211!2.54e-07!39;CL:0002319!9.84e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.28e-07,43;CL:0000221,2.40e-07,44;CL:0000133,2.40e-07,44;CL:0000393,9.14e-07,39;CL:0000211,9.14e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.67e-13!73;UBERON:0005743!4.67e-13!73;UBERON:0000073!1.14e-12!75;UBERON:0001016!1.14e-12!75;UBERON:0004121!2.49e-12!102;UBERON:0000924!2.49e-12!102;UBERON:0006601!2.49e-12!102;UBERON:0002346!1.08e-10!71;UBERON:0003075!1.08e-10!71;UBERON:0007284!1.08e-10!71;UBERON:0001049!4.14e-08!52;UBERON:0005068!4.14e-08!52;UBERON:0006241!4.14e-08!52;UBERON:0007135!4.14e-08!52;UBERON:0003103!7.21e-08!43;UBERON:0003076!5.68e-07!12;UBERON:0003057!5.68e-07!12;UBERON:0000033!9.02e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.69e-17,73;UBERON:0001016,4.79e-16,75;UBERON:0010314,5.71e-16,92;UBERON:0000073,1.41e-15,54;UBERON:0003076,3.81e-15,12;UBERON:0003057,3.81e-15,12;UBERON:0002346,7.18e-15,64;UBERON:0003075,7.18e-15,64;UBERON:0007284,7.18e-15,64;UBERON:0001049,6.64e-14,52;UBERON:0005068,6.64e-14,52;UBERON:0006241,6.64e-14,52;UBERON:0007135,6.64e-14,52;UBERON:0004121,9.98e-13,95;UBERON:0000924,9.98e-13,95;UBERON:0006601,9.98e-13,95;UBERON:0010371,4.91e-12,73;UBERON:0002020,8.28e-11,34;UBERON:0002240,1.21e-10,6;UBERON:0005174,1.21e-10,6;UBERON:0001137,1.21e-10,6;UBERON:0001948,5.86e-09,5;UBERON:0002315,5.86e-09,5;UBERON:0000025,7.73e-09,114;UBERON:0002616,3.63e-08,46;UBERON:0000955,6.86e-08,47;UBERON:0006238,6.86e-08,47;UBERON:0004111,1.12e-07,122;UBERON:0002021,2.57e-07,10;UBERON:0000411,2.57e-07,10;UBERON:0001950,2.57e-07,10 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,0.912392380975631,0.550640256485045,0,1.09012578190223,1.31811709640683,0.58328969722285,0.139986421625363,1.43752564364972,0,0,0,0.514518872071894,0.286533439938757,1.03134418455488,0.606949382578793,0,0.633831403506179,0,0,0.449949858640699,0,0,1.19840044207362,0.384218305321555,0,0.270011876663381,0,3.71346279724945,3.3130281142742,0.122490799214954,0.287536413054709,0,1.10115880999389,1.27687338085188,2.91852413186863,0.131886287730194,0.457438218012048,0,1.3959149950069,1.12552522006336,1.06958773443767,1.17851434189467,4.6982654663704,1.67759501242771,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,1.68533304158102,0.340860645156116,1.29893002301434,0.35333957451034,0.14084341977668,2.56652954828636,0,0,0.216491041011214,0,0,0.68510327831436,0,0.29688427812965,0.346970653532272,1.52232739156071,0,0.452167921657868,0.823120949949934,1.38233250462643,0,0.86759614151947,0,0.808834249737046,1.32504911076236,1.45462575940567,0,1.17112318804619,1.67557365450764,0,0.11981512450592,0,0,0.748953197024114,0,0.125654352112864,1.21677024134594,1.02286182932132,1.0389402227978,1.1356888414743,1.12023300235348,1.24406970610093,0,1.89397670297827,0,0.229902104433473,0,0.30140963567143,0.272145996605311,0.512454881139399,0.562210347358373,1.29351685369508,0,0,0,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0.617068451549513,0.930135779001631,0.804820204198858,0.350296027101508,0.493679549740441,1.80584210487005,1.78351381000883,2.04679982395465,1.75640092232841,2.14730270016595,1.05144974282064,0.308713837137853,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,0,0,1.00534083520108,0.596869416123452,0,0,0,0,0.948339504765408,0.456994050438915,1.1270773567308,1.01825663922657,0.193952487167626,0.49095073923223,0.69560190836683,0.885660887877613,0.156998727841375,0.987177311374404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.488894929326078,1.01847051465113,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.788175720530955,0.44292937929755,0.637819074629948,0.491589944147214,0.690739927463582,0.578596234326046,0,0,0,0.275936746304732,2.56880943980467,1.40654023910644,0.163934945376675,6.5642441073137,0.94652465824877,1.95219372148319,2.15423397732799,0.716906393857656,0.445597348164788,0.283076530788832,0.404810701674894,2.04579100537918,0.395287777946524,0.642642632843614,0.141940085208269,0.178065603667255,0.81443479676788,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0.712994756769443,0,0,0,0.340439605753788,0.540183282093931,0,0,0.177340233642274,0.356737635204141,0.493647061806363,0,0.23467170806371,0,0.661585194164886,0.16488625294148,0.322928853391811,0.241251699712623,0.238744688006273,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0.138199973804424,0,0.158167996790568,0.406638934253697,0.216010681643603,0.836353184057875,0,0.404593039154462,0.41326727862668,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0.583353565032143,0.774958940866387,1.35164900392623,0.821500670520278,0.39061315453185,0.314578033277133,0.241584120826006,0.576060012515731,0,0.202725215290164,0.205421914329655,0,0,0,0.120195449519969,0,0,0.15241361331,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,0.579568782096571,0.750729901804728,0.183151624267265,0.214368379079066,0,1.6942555278512,1.84130094602871,1.71868654031819,1.89038500578056,1.37016503954128,0,0.675022500231806,0.45032120322422,1.35942722695261,1.55328093525546,0.103787347584177,0,0.512200817262403,0,0,0,0,0.206035057238894,0.320919209591815,0.758091635291392,0.25347929989024,0.754505365544305,0.468207537349412,0.576226371643824,0.516919220600519,0,0.463537303779422,0.77163688185482,0,0.883193520806384,0,0.177475806159338,0.715308569841963,0.726732083161643,0.564656282491984,0.930760686808441,0.365855945745545,0.789209134313529,0.271608227691724,0,0.711810108745045,0.29551344712669,0.409231043169689,0.464810523557898,0.385813221962283,0.249810577937946,0,0.214871054048298,0.57386499620653,0.661774257358546,1.62307484934295 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,0.912392380975631,0.550640256485045,0,1.09012578190223,1.31811709640683,0.58328969722285,0.139986421625363,1.43752564364972,0,0,0,0.514518872071894,0.286533439938757,1.03134418455488,0.606949382578793,0,0.633831403506179,0,0,0.449949858640699,0,0,1.19840044207362,0.384218305321555,0,0.270011876663381,0,3.71346279724945,3.3130281142742,0.122490799214954,0.287536413054709,0,1.10115880999389,1.27687338085188,2.91852413186863,0.131886287730194,0.457438218012048,0,1.3959149950069,1.12552522006336,1.06958773443767,1.17851434189467,4.6982654663704,1.67759501242771,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,1.68533304158102,0.340860645156116,1.29893002301434,0.35333957451034,0.14084341977668,2.56652954828636,0,0,0.216491041011214,0,0,0.68510327831436,0,0.29688427812965,0.346970653532272,1.52232739156071,0,0.452167921657868,0.823120949949934,1.38233250462643,0,0.86759614151947,0,0.808834249737046,1.32504911076236,1.45462575940567,0,1.17112318804619,1.67557365450764,0,0.11981512450592,0,0,0.748953197024114,0,0.125654352112864,1.21677024134594,1.02286182932132,1.0389402227978,1.1356888414743,1.12023300235348,1.24406970610093,0,1.89397670297827,0,0.229902104433473,0,0.30140963567143,0.272145996605311,0.512454881139399,0.562210347358373,1.29351685369508,0,0,0,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0.617068451549513,0.930135779001631,0.804820204198858,0.350296027101508,0.493679549740441,1.80584210487005,1.78351381000883,2.04679982395465,1.75640092232841,2.14730270016595,1.05144974282064,0.308713837137853,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,0,0,1.00534083520108,0.596869416123452,0,0,0,0,0.948339504765408,0.456994050438915,1.1270773567308,1.01825663922657,0.193952487167626,0.49095073923223,0.69560190836683,0.885660887877613,0.156998727841375,0.987177311374404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.488894929326078,1.01847051465113,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.788175720530955,0.44292937929755,0.637819074629948,0.491589944147214,0.690739927463582,0.578596234326046,0,0,0,0.275936746304732,2.56880943980467,1.40654023910644,0.163934945376675,6.5642441073137,0.94652465824877,1.95219372148319,2.15423397732799,0.716906393857656,0.445597348164788,0.283076530788832,0.404810701674894,2.04579100537918,0.395287777946524,0.642642632843614,0.141940085208269,0.178065603667255,0.81443479676788,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0.712994756769443,0,0,0,0.340439605753788,0.540183282093931,0,0,0.177340233642274,0.356737635204141,0.493647061806363,0,0.23467170806371,0,0.661585194164886,0.16488625294148,0.322928853391811,0.241251699712623,0.238744688006273,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0.138199973804424,0,0.158167996790568,0.406638934253697,0.216010681643603,0.836353184057875,0,0.404593039154462,0.41326727862668,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0.583353565032143,0.774958940866387,1.35164900392623,0.821500670520278,0.39061315453185,0.314578033277133,0.241584120826006,0.576060012515731,0,0.202725215290164,0.205421914329655,0,0,0,0.120195449519969,0,0,0.15241361331,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,0.579568782096571,0.750729901804728,0.183151624267265,0.214368379079066,0,1.6942555278512,1.84130094602871,1.71868654031819,1.89038500578056,1.37016503954128,0,0.675022500231806,0.45032120322422,1.35942722695261,1.55328093525546,0.103787347584177,0,0.512200817262403,0,0,0,0,0.206035057238894,0.320919209591815,0.758091635291392,0.25347929989024,0.754505365544305,0.468207537349412,0.576226371643824,0.516919220600519,0,0.463537303779422,0.77163688185482,0,0.883193520806384,0,0.177475806159338,0.715308569841963,0.726732083161643,0.564656282491984,0.930760686808441,0.365855945745545,0.789209134313529,0.271608227691724,0,0.711810108745045,0.29551344712669,0.409231043169689,0.464810523557898,0.385813221962283,0.249810577937946,0,0.214871054048298,0.57386499620653,0.661774257358546,1.62307484934295 | ||
|short_description=p@chr11:30549364..30549374,- | |||
}} | }} |
Latest revision as of 19:02, 5 August 2015
Short description: | p@chr11:30549364..30549374, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:30549364..30549374, - |
Coexpression cluster: | MCL_coexpression_mm9:311 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.28e-07 | 43 |
ectodermal cell | 2.40e-07 | 44 |
neurectodermal cell | 2.40e-07 | 44 |
electrically responsive cell | 9.14e-07 | 39 |
electrically active cell | 9.14e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.69e-17 | 73 |
nervous system | 4.79e-16 | 75 |
structure with developmental contribution from neural crest | 5.71e-16 | 92 |
regional part of nervous system | 1.41e-15 | 54 |
posterior neural tube | 3.81e-15 | 12 |
chordal neural plate | 3.81e-15 | 12 |
neurectoderm | 7.18e-15 | 64 |
neural plate | 7.18e-15 | 64 |
presumptive neural plate | 7.18e-15 | 64 |
neural tube | 6.64e-14 | 52 |
neural rod | 6.64e-14 | 52 |
future spinal cord | 6.64e-14 | 52 |
neural keel | 6.64e-14 | 52 |
ectoderm-derived structure | 9.98e-13 | 95 |
ectoderm | 9.98e-13 | 95 |
presumptive ectoderm | 9.98e-13 | 95 |
ecto-epithelium | 4.91e-12 | 73 |
gray matter | 8.28e-11 | 34 |
spinal cord | 1.21e-10 | 6 |
dorsal region element | 1.21e-10 | 6 |
dorsum | 1.21e-10 | 6 |
regional part of spinal cord | 5.86e-09 | 5 |
gray matter of spinal cord | 5.86e-09 | 5 |
tube | 7.73e-09 | 114 |
regional part of brain | 3.63e-08 | 46 |
brain | 6.86e-08 | 47 |
future brain | 6.86e-08 | 47 |
anatomical conduit | 1.12e-07 | 122 |
occipital lobe | 2.57e-07 | 10 |
visual cortex | 2.57e-07 | 10 |
neocortex | 2.57e-07 | 10 |