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FFCP PHASE1:Mm9::chr6:48626407..48626421,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=118
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr6:48626407..48626421,+
|description=CAGE_peak_at_chr6:48626407..48626421,+
|description=CAGE_peak_at_chr6:48626407..48626421,+
|id=chr6:48626407..48626421,+
|id=chr6:48626407..48626421,+
|ontology_enrichment_celltype=CL:0000838!1.44e-12!12;CL:0000084!1.35e-11!11;CL:0000827!1.35e-11!11;CL:0000542!3.06e-11!13;CL:0000051!3.06e-11!13;CL:0000791!1.37e-10!9;CL:0000789!1.37e-10!9;CL:0002420!1.37e-10!9;CL:0002419!1.37e-10!9;CL:0000790!1.37e-10!9;CL:0000624!1.29e-09!8;CL:0000988!1.90e-09!32;CL:0002032!1.90e-09!32;CL:0000037!1.90e-09!32;CL:0000566!1.90e-09!32;CL:0000837!1.90e-09!32;CL:0002031!4.72e-09!25;CL:0000738!1.49e-07!17;CL:0002087!1.49e-07!17;CL:0000893!1.55e-07!6;CL:0002489!1.55e-07!6;CL:0000898!1.55e-07!6;CL:0000809!1.55e-07!6;CL:0000810!1.55e-07!6;CL:0000895!1.55e-07!6;CL:0000808!1.55e-07!6;CL:0000894!1.55e-07!6;CL:0000806!1.55e-07!6;CL:0000807!1.55e-07!6;CL:0000805!1.55e-07!6;CL:0002425!1.55e-07!6;CL:0002436!1.55e-07!6;CL:0002427!1.55e-07!6;CL:0002428!1.55e-07!6;CL:0002429!1.55e-07!6;CL:0002433!1.55e-07!6;CL:0002431!1.55e-07!6;CL:0002432!1.55e-07!6
|ontology_enrichment_celltype_v019_2=CL:0000838,1.29e-26,12;CL:0000791,7.44e-25,9;CL:0000789,7.44e-25,9;CL:0002420,7.44e-25,9;CL:0002419,7.44e-25,9;CL:0000790,7.44e-25,9;CL:0000542,2.20e-24,13;CL:0000051,2.20e-24,13;CL:0000084,4.05e-24,11;CL:0000827,4.05e-24,11;CL:0000624,2.46e-22,8;CL:0002031,8.45e-19,25;CL:0000738,4.43e-18,17;CL:0002087,4.43e-18,17;CL:0000893,5.66e-17,6;CL:0002489,5.66e-17,6;CL:0000898,5.66e-17,6;CL:0000809,5.66e-17,6;CL:0000810,5.66e-17,6;CL:0000895,5.66e-17,6;CL:0000808,5.66e-17,6;CL:0000894,5.66e-17,6;CL:0000806,5.66e-17,6;CL:0000807,5.66e-17,6;CL:0000805,5.66e-17,6;CL:0002425,5.66e-17,6;CL:0002436,5.66e-17,6;CL:0002427,5.66e-17,6;CL:0002428,5.66e-17,6;CL:0002429,5.66e-17,6;CL:0002433,5.66e-17,6;CL:0002431,5.66e-17,6;CL:0002432,5.66e-17,6;CL:0000988,5.52e-14,32;CL:0002032,5.52e-14,32;CL:0000037,5.52e-14,32;CL:0000837,5.52e-14,32;CL:0002320,3.36e-10,46;CL:0000134,3.36e-10,46;CL:0000219,3.39e-08,54
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!4.45e-20!29;UBERON:0002193!2.38e-17!48;UBERON:0003408!2.19e-16!24;UBERON:0002370!9.59e-16!23;UBERON:0000974!9.59e-16!23;UBERON:0004807!9.59e-16!23;UBERON:0005058!9.59e-16!23;UBERON:0003351!9.59e-16!23;UBERON:0009113!9.59e-16!23;UBERON:0003295!9.59e-16!23;UBERON:0009722!9.59e-16!23;UBERON:0005562!9.59e-16!23;UBERON:0007690!9.59e-16!23;UBERON:0002390!4.54e-15!45;UBERON:0003061!4.54e-15!45;UBERON:0001004!5.20e-15!42;UBERON:0006562!9.52e-15!24;UBERON:0001557!9.52e-15!24;UBERON:0001042!9.52e-15!24;UBERON:0008814!9.52e-15!24;UBERON:0009145!9.52e-15!24;UBERON:0000065!2.15e-14!41;UBERON:0002405!1.72e-13!70;UBERON:0005057!3.33e-13!51;UBERON:0000072!3.17e-12!27;UBERON:0001007!3.66e-11!128;UBERON:0001555!3.66e-11!128;UBERON:0007026!3.66e-11!128;UBERON:0004119!1.05e-10!130;UBERON:0000925!1.05e-10!130;UBERON:0006595!1.05e-10!130;UBERON:0001041!1.16e-10!92;UBERON:0004921!3.51e-10!126;UBERON:0004185!3.51e-10!126;UBERON:0000077!2.37e-09!97;UBERON:0005911!7.58e-09!69;UBERON:0003104!8.05e-09!131;UBERON:0009142!8.05e-09!131;UBERON:0000063!1.46e-08!35;UBERON:0002530!2.53e-07!65;UBERON:0002368!3.13e-07!60
|ontology_enrichment_uberon_v019_2=UBERON:0004177,6.16e-36,29;UBERON:0005057,6.16e-36,29;UBERON:0002370,2.92e-34,23;UBERON:0000974,2.92e-34,23;UBERON:0004807,2.92e-34,23;UBERON:0005058,2.92e-34,23;UBERON:0003351,2.92e-34,23;UBERON:0009113,2.92e-34,23;UBERON:0003295,2.92e-34,23;UBERON:0009722,2.92e-34,23;UBERON:0005562,2.92e-34,23;UBERON:0007690,2.92e-34,23;UBERON:0006562,1.17e-32,24;UBERON:0003408,1.17e-32,24;UBERON:0001557,1.17e-32,24;UBERON:0001042,1.17e-32,24;UBERON:0008814,1.17e-32,24;UBERON:0009145,1.17e-32,24;UBERON:0000077,5.31e-32,35;UBERON:0002193,2.21e-29,48;UBERON:0002405,2.21e-29,48;UBERON:0002390,8.31e-29,45;UBERON:0003061,8.31e-29,45;UBERON:0000072,1.46e-28,27;UBERON:0007811,2.27e-20,36;UBERON:0000065,2.24e-19,41;UBERON:0001004,8.23e-19,42;UBERON:0000153,2.25e-16,43;UBERON:0003081,1.26e-13,87;UBERON:0003929,1.86e-13,55;UBERON:0001041,2.21e-12,80;UBERON:0002368,5.65e-12,60;UBERON:0005911,5.01e-11,69;UBERON:0002530,1.01e-10,65;UBERON:0000490,1.71e-10,66;UBERON:0002384,3.36e-10,46;UBERON:0000949,2.90e-09,72;UBERON:0000926,2.30e-08,120;UBERON:0004120,2.30e-08,120;UBERON:0006603,2.30e-08,120;UBERON:0004921,3.53e-07,114;UBERON:0001007,5.71e-07,116;UBERON:0001555,5.71e-07,116;UBERON:0007026,5.71e-07,116;UBERON:0004119,9.09e-07,118;UBERON:0000925,9.09e-07,118;UBERON:0006595,9.09e-07,118
|phase1_expression=0,0,0,0,0,0,0,20.7888550740938,26.7498572088167,36.514066106231,5.47897498321616,5.50427897067821,16.4352700733957,15.2111500209055,0,0.607425802169478,0,3.94327706697797,3.97631857456642,4.66828616977833,0.17008658030214,1.19149141441062,0.261199789138935,0.95995453676044,0.91763712426868,0,0,0,0,0.756090389279792,0.221730510655305,0.635030673459631,0,0,0,0,0,0,0,0,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,7.3824346665404,16.6833292662609,7.39406358113421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,4.05810284182349,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.45673551887624,13.2058320660058,0.445326417194474,0.173485326766136,0,0,0,0.23517741427141,0.125666591329675,0,0,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0,0.255457055208591,0.599075622529601,0.599902730993408,0.635351135365324,0,0,0,0,0,0,0,0,0.746441823660558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0.292399974850665,0,0,0,0,0.330418782983798,0.264450566663544,0,0.232236671860439,0.128867461322093,0,0,0,0.474529061544512,0,0.754005626400808,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.246794327843601,0.296452627087149,0,0,0,0.202860121388503,0,0.50925170356284,0.575392274901621,0.324270453550071,0,0,0,0,0.252578877947112,0,0,1.10851914099963,0,0,0.169745085775188,0,0.335012514883631,0,0.195133647857799,0.157635144106191,0.221464689648775,0.637819074629948,0.81931657357869,0.518054945597687,0.289298117163023,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0.291480836629851,0,3.2465467351592,0.206386867963223,0.925972636848558,0.941842285023455,1.91371918809435,3.20289442489132,2.37969801991397,1.53946597556024,1.65839968565309,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,6.32022241256356,0.405450430580328,0.616265742988964,1.94881234466693,3.75956060901711,6.55648470778174,5.64918612743854,4.57837534241189,5.25025539730368,2.362411006305,3.93222122033678,3.41102582589133,9.71739600567328,7.94762934834669,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0.412085900803307,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0.467863216890817,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,20.7888550740938,26.7498572088167,36.514066106231,5.47897498321616,5.50427897067821,16.4352700733957,15.2111500209055,0,0.607425802169478,0,3.94327706697797,3.97631857456642,4.66828616977833,0.17008658030214,1.19149141441062,0.261199789138935,0.95995453676044,0.91763712426868,0,0,0,0,0.756090389279792,0.221730510655305,0.635030673459631,0,0,0,0,0,0,0,0,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,7.3824346665404,16.6833292662609,7.39406358113421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,4.05810284182349,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.45673551887624,13.2058320660058,0.445326417194474,0.173485326766136,0,0,0,0.23517741427141,0.125666591329675,0,0,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0,0.255457055208591,0.599075622529601,0.599902730993408,0.635351135365324,0,0,0,0,0,0,0,0,0.746441823660558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0.292399974850665,0,0,0,0,0.330418782983798,0.264450566663544,0,0.232236671860439,0.128867461322093,0,0,0,0.474529061544512,0,0.754005626400808,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.246794327843601,0.296452627087149,0,0,0,0.202860121388503,0,0.50925170356284,0.575392274901621,0.324270453550071,0,0,0,0,0.252578877947112,0,0,1.10851914099963,0,0,0.169745085775188,0,0.335012514883631,0,0.195133647857799,0.157635144106191,0.221464689648775,0.637819074629948,0.81931657357869,0.518054945597687,0.289298117163023,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0.291480836629851,0,3.2465467351592,0.206386867963223,0.925972636848558,0.941842285023455,1.91371918809435,3.20289442489132,2.37969801991397,1.53946597556024,1.65839968565309,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,6.32022241256356,0.405450430580328,0.616265742988964,1.94881234466693,3.75956060901711,6.55648470778174,5.64918612743854,4.57837534241189,5.25025539730368,2.362411006305,3.93222122033678,3.41102582589133,9.71739600567328,7.94762934834669,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0.412085900803307,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0.467863216890817,0,0,0,0
|short_description=p@chr6:48626407..48626421,+
|short_description=p@chr6:48626407..48626421,+
}}
}}

Latest revision as of 20:07, 5 August 2015

Short description:p@chr6:48626407..48626421, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr6:48626407..48626421, +
Coexpression cluster:MCL_coexpression_mm9:118
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr6:48626407..48626421+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E920.79
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E726.75
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F236.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.48
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.50
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E416.44
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E815.21
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.98
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.38
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I916.68
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H913.21
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B56.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C13.76
thymus, embryo E18.CNhs10595.1273-19G46.56
thymus, neonate N02.CNhs11181.1541-43F85.65
thymus, neonate N03.CNhs11137.2104-43C74.58
thymus, neonate N06.CNhs11197.681-26C45.25
thymus, neonate N07.CNhs11211.713-19D32.36
thymus, neonate N10.CNhs11194.748-24E43.93
thymus, neonate N20.CNhs11186.820-7A23.41
thymus, neonate N25.CNhs11125.1362-25G79.72
thymus, neonate N30.CNhs11132.1393-42G27.95
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell1.29e-2612
mature alpha-beta T cell7.44e-259
alpha-beta T cell7.44e-259
immature T cell7.44e-259
mature T cell7.44e-259
immature alpha-beta T cell7.44e-259
lymphocyte2.20e-2413
common lymphoid progenitor2.20e-2413
T cell4.05e-2411
pro-T cell4.05e-2411
CD4-positive, alpha-beta T cell2.46e-228
hematopoietic lineage restricted progenitor cell8.45e-1925
leukocyte4.43e-1817
nongranular leukocyte4.43e-1817
thymocyte5.66e-176
double negative thymocyte5.66e-176
naive T cell5.66e-176
double-positive, alpha-beta thymocyte5.66e-176
CD4-positive, alpha-beta thymocyte5.66e-176
naive thymus-derived CD4-positive, alpha-beta T cell5.66e-176
DN4 thymocyte5.66e-176
DN1 thymic pro-T cell5.66e-176
DN2 thymocyte5.66e-176
DN3 thymocyte5.66e-176
immature single positive thymocyte5.66e-176
early T lineage precursor5.66e-176
mature CD4 single-positive thymocyte5.66e-176
resting double-positive thymocyte5.66e-176
double-positive blast5.66e-176
CD69-positive double-positive thymocyte5.66e-176
CD69-positive, CD4-positive single-positive thymocyte5.66e-176
CD4-positive, CD8-intermediate double-positive thymocyte5.66e-176
CD24-positive, CD4 single-positive thymocyte5.66e-176
hematopoietic cell5.52e-1432
hematopoietic oligopotent progenitor cell5.52e-1432
hematopoietic stem cell5.52e-1432
hematopoietic multipotent progenitor cell5.52e-1432
connective tissue cell3.36e-1046
mesenchymal cell3.36e-1046
motile cell3.39e-0854

Uber anatomy
Ontology termp-valuen
hemopoietic organ6.16e-3629
immune organ6.16e-3629
thymus2.92e-3423
neck2.92e-3423
respiratory system epithelium2.92e-3423
hemolymphoid system gland2.92e-3423
pharyngeal epithelium2.92e-3423
thymic region2.92e-3423
pharyngeal gland2.92e-3423
entire pharyngeal arch endoderm2.92e-3423
thymus primordium2.92e-3423
early pharyngeal endoderm2.92e-3423
pharynx1.17e-3224
gland of gut1.17e-3224
upper respiratory tract1.17e-3224
chordate pharynx1.17e-3224
pharyngeal arch system1.17e-3224
pharyngeal region of foregut1.17e-3224
mixed endoderm/mesoderm-derived structure5.31e-3235
hemolymphoid system2.21e-2948
immune system2.21e-2948
hematopoietic system8.31e-2945
blood island8.31e-2945
segment of respiratory tract1.46e-2827
craniocervical region2.27e-2036
respiratory tract2.24e-1941
respiratory system8.23e-1942
anterior region of body2.25e-1643
lateral plate mesoderm1.26e-1387
gut epithelium1.86e-1355
foregut2.21e-1280
endocrine gland5.65e-1260
endo-epithelium5.01e-1169
gland1.01e-1065
unilaminar epithelium1.71e-1066
connective tissue3.36e-1046
endocrine system2.90e-0972
mesoderm2.30e-08120
mesoderm-derived structure2.30e-08120
presumptive mesoderm2.30e-08120
subdivision of digestive tract3.53e-07114
digestive system5.71e-07116
digestive tract5.71e-07116
primitive gut5.71e-07116
endoderm-derived structure9.09e-07118
endoderm9.09e-07118
presumptive endoderm9.09e-07118
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