FFCP PHASE1:Hg19::chr6:146864862..146864881,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10981 | |EntrezGene=10981 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9772 | |HGNC=9772 | ||
|TSSclassifier=strong | |||
|UniProt=Q13637 | |UniProt=Q13637 | ||
|association_with_transcript=33bp_to_ENST00000367495_5end | |association_with_transcript=33bp_to_ENST00000367495_5end | ||
|cluster_id=chr6:146864862..146864881,+ | |||
|coexpression_cluster_id=C4573 | |coexpression_cluster_id=C4573 | ||
|description=CAGE_peak_3_at_RAB32_5end | |description=CAGE_peak_3_at_RAB32_5end | ||
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|ontology_enrichment_celltype=CL:0000144!1.45e-26!625;CL:0002371!1.87e-26!591;CL:0000012!8.41e-23!682;CL:0000548!5.35e-22!679;CL:0000004!5.35e-22!679;CL:0000255!5.35e-22!679;CL:0002057!4.11e-20!42;CL:0000557!1.77e-19!71;CL:0002194!3.81e-19!63;CL:0000576!3.81e-19!63;CL:0000040!3.81e-19!63;CL:0000559!3.81e-19!63;CL:0002009!2.08e-18!65;CL:0000839!4.58e-18!70;CL:0000766!7.15e-18!76;CL:0000860!1.18e-17!45;CL:0000220!7.73e-17!246;CL:0002321!1.60e-16!248;CL:0000222!1.02e-15!119;CL:0000003!1.26e-13!722;CL:0000063!1.48e-13!578;CL:0000763!1.36e-09!112;CL:0000049!1.36e-09!112;CL:0000213!4.74e-09!57;CL:0000215!4.74e-09!57;CL:0000115!6.52e-09!35;CL:0002078!7.34e-09!44;CL:0000183!8.55e-09!59;CL:0000066!1.46e-08!254;CL:0000055!3.45e-08!180;CL:0000187!1.39e-07!54;CL:0000680!3.61e-07!57;CL:0000056!3.61e-07!57;CL:0000355!3.61e-07!57;CL:0000075!6.66e-07!27 | |ontology_enrichment_celltype=CL:0000144!1.45e-26!625;CL:0002371!1.87e-26!591;CL:0000012!8.41e-23!682;CL:0000548!5.35e-22!679;CL:0000004!5.35e-22!679;CL:0000255!5.35e-22!679;CL:0002057!4.11e-20!42;CL:0000557!1.77e-19!71;CL:0002194!3.81e-19!63;CL:0000576!3.81e-19!63;CL:0000040!3.81e-19!63;CL:0000559!3.81e-19!63;CL:0002009!2.08e-18!65;CL:0000839!4.58e-18!70;CL:0000766!7.15e-18!76;CL:0000860!1.18e-17!45;CL:0000220!7.73e-17!246;CL:0002321!1.60e-16!248;CL:0000222!1.02e-15!119;CL:0000003!1.26e-13!722;CL:0000063!1.48e-13!578;CL:0000763!1.36e-09!112;CL:0000049!1.36e-09!112;CL:0000213!4.74e-09!57;CL:0000215!4.74e-09!57;CL:0000115!6.52e-09!35;CL:0002078!7.34e-09!44;CL:0000183!8.55e-09!59;CL:0000066!1.46e-08!254;CL:0000055!3.45e-08!180;CL:0000187!1.39e-07!54;CL:0000680!3.61e-07!57;CL:0000056!3.61e-07!57;CL:0000355!3.61e-07!57;CL:0000075!6.66e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.35e-17;33!CL:0002057;4.35e-17;33!CL:0000473;8.74e-15;39!CL:0000234;8.74e-15;39!CL:0000576;1.44e-13;48!CL:0000766;2.21e-10;69!CL:0000115;7.32e-08;36!CL:0000075;3.36e-07;27 | |ontology_enrichment_celltype_v019=CL:0000860;4.35e-17;33!CL:0002057;4.35e-17;33!CL:0000473;8.74e-15;39!CL:0000234;8.74e-15;39!CL:0000576;1.44e-13;48!CL:0000766;2.21e-10;69!CL:0000115;7.32e-08;36!CL:0000075;3.36e-07;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.49e-21,67;CL:0002194,2.26e-21,59;CL:0000576,2.26e-21,59;CL:0000040,2.26e-21,59;CL:0000559,2.26e-21,59;CL:0000473,6.14e-21,48;CL:0000234,6.14e-21,48;CL:0002009,1.65e-20,61;CL:0000860,1.69e-20,42;CL:0002057,1.69e-20,42;CL:0000766,5.77e-20,72;CL:0000839,6.89e-20,66;CL:0002321,1.32e-17,250;CL:0000222,2.48e-16,121;CL:0000763,1.54e-10,108;CL:0000049,1.54e-10,108;CL:0000115,1.36e-09,36;CL:0000213,1.50e-09,58;CL:0000215,1.50e-09,58;CL:0002078,2.25e-09,45;CL:0000066,4.39e-08,253;CL:0000187,1.15e-07,55;CL:0000048,2.82e-07,427;CL:0000680,2.98e-07,58;CL:0000056,2.98e-07,58;CL:0000355,2.98e-07,58;CL:0000723,3.35e-07,433;CL:0000034,4.53e-07,441;CL:0000075,5.15e-07,27;CL:0000192,9.95e-07,43;CL:0000514,9.95e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002057;2.59e-15;42 | |ontology_enrichment_development_v019=CL:0002057;2.59e-15;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.23e-29!216;UBERON:0002204!3.67e-24!167;UBERON:0000926!4.90e-23!448;UBERON:0004120!4.90e-23!448;UBERON:0006603!4.90e-23!448;UBERON:0002371!1.13e-19!80;UBERON:0001474!1.12e-18!86;UBERON:0004765!1.31e-18!101;UBERON:0001434!1.31e-18!101;UBERON:0002405!3.92e-15!115;UBERON:0002193!2.99e-14!112;UBERON:0002390!3.11e-14!102;UBERON:0003061!3.11e-14!102;UBERON:0000467!8.32e-14!625;UBERON:0000480!1.80e-13!626;UBERON:0002050!3.95e-12!605;UBERON:0005423!3.95e-12!605;UBERON:0000923!4.51e-12!604;UBERON:0005291!4.51e-12!604;UBERON:0006598!4.51e-12!604;UBERON:0002532!4.51e-12!604;UBERON:0000468!5.87e-12!659;UBERON:0000922!8.19e-12!612;UBERON:0002049!2.26e-11!79;UBERON:0007798!2.26e-11!79;UBERON:0003914!7.30e-11!118;UBERON:0005256!7.43e-11!143;UBERON:0004535!1.71e-10!110;UBERON:0001009!6.13e-10!113;UBERON:0004872!1.69e-09!84;UBERON:0000055!1.36e-08!69;UBERON:0001981!1.54e-08!60;UBERON:0007500!1.54e-08!60;UBERON:0004537!1.54e-08!60;UBERON:0006965!1.54e-08!60;UBERON:0000486!4.20e-08!82;UBERON:0000914!4.30e-08!83;UBERON:0002329!4.30e-08!83;UBERON:0003077!4.30e-08!83;UBERON:0003059!4.30e-08!83;UBERON:0007282!4.30e-08!83;UBERON:0009618!4.30e-08!83;UBERON:0007285!4.30e-08!83;UBERON:0000490!6.16e-08!138;UBERON:0004290!4.58e-07!70;UBERON:0001637!6.29e-07!42;UBERON:0003509!6.29e-07!42;UBERON:0004572!6.29e-07!42;UBERON:0000353!9.74e-07!17 | |ontology_enrichment_uberon=UBERON:0003081!1.23e-29!216;UBERON:0002204!3.67e-24!167;UBERON:0000926!4.90e-23!448;UBERON:0004120!4.90e-23!448;UBERON:0006603!4.90e-23!448;UBERON:0002371!1.13e-19!80;UBERON:0001474!1.12e-18!86;UBERON:0004765!1.31e-18!101;UBERON:0001434!1.31e-18!101;UBERON:0002405!3.92e-15!115;UBERON:0002193!2.99e-14!112;UBERON:0002390!3.11e-14!102;UBERON:0003061!3.11e-14!102;UBERON:0000467!8.32e-14!625;UBERON:0000480!1.80e-13!626;UBERON:0002050!3.95e-12!605;UBERON:0005423!3.95e-12!605;UBERON:0000923!4.51e-12!604;UBERON:0005291!4.51e-12!604;UBERON:0006598!4.51e-12!604;UBERON:0002532!4.51e-12!604;UBERON:0000468!5.87e-12!659;UBERON:0000922!8.19e-12!612;UBERON:0002049!2.26e-11!79;UBERON:0007798!2.26e-11!79;UBERON:0003914!7.30e-11!118;UBERON:0005256!7.43e-11!143;UBERON:0004535!1.71e-10!110;UBERON:0001009!6.13e-10!113;UBERON:0004872!1.69e-09!84;UBERON:0000055!1.36e-08!69;UBERON:0001981!1.54e-08!60;UBERON:0007500!1.54e-08!60;UBERON:0004537!1.54e-08!60;UBERON:0006965!1.54e-08!60;UBERON:0000486!4.20e-08!82;UBERON:0000914!4.30e-08!83;UBERON:0002329!4.30e-08!83;UBERON:0003077!4.30e-08!83;UBERON:0003059!4.30e-08!83;UBERON:0007282!4.30e-08!83;UBERON:0009618!4.30e-08!83;UBERON:0007285!4.30e-08!83;UBERON:0000490!6.16e-08!138;UBERON:0004290!4.58e-07!70;UBERON:0001637!6.29e-07!42;UBERON:0003509!6.29e-07!42;UBERON:0004572!6.29e-07!42;UBERON:0000353!9.74e-07!17 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p3@RAB32 | |short_description=p3@RAB32 | ||
}} | }} |
Latest revision as of 23:07, 15 September 2015
Short description: | p3@RAB32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAB32_5end |
Coexpression cluster: | C4573_Melanocyte_Monocytederived_Osteoblast_Alveolar_Smooth_mesothelioma_Hepatic |
Association with transcript: | 33bp_to_ENST00000367495_5end |
EntrezGene: | RAB32 |
HGNC: | 9772 |
UniProt: | Q13637 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.49e-21 | 67 |
monopoietic cell | 2.26e-21 | 59 |
monocyte | 2.26e-21 | 59 |
monoblast | 2.26e-21 | 59 |
promonocyte | 2.26e-21 | 59 |
defensive cell | 6.14e-21 | 48 |
phagocyte | 6.14e-21 | 48 |
macrophage dendritic cell progenitor | 1.65e-20 | 61 |
classical monocyte | 1.69e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.69e-20 | 42 |
myeloid leukocyte | 5.77e-20 | 72 |
myeloid lineage restricted progenitor cell | 6.89e-20 | 66 |
embryonic cell | 1.32e-17 | 250 |
mesodermal cell | 2.48e-16 | 121 |
myeloid cell | 1.54e-10 | 108 |
common myeloid progenitor | 1.54e-10 | 108 |
endothelial cell | 1.36e-09 | 36 |
lining cell | 1.50e-09 | 58 |
barrier cell | 1.50e-09 | 58 |
meso-epithelial cell | 2.25e-09 | 45 |
epithelial cell | 4.39e-08 | 253 |
muscle cell | 1.15e-07 | 55 |
multi fate stem cell | 2.82e-07 | 427 |
muscle precursor cell | 2.98e-07 | 58 |
myoblast | 2.98e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.98e-07 | 58 |
somatic stem cell | 3.35e-07 | 433 |
stem cell | 4.53e-07 | 441 |
columnar/cuboidal epithelial cell | 5.15e-07 | 27 |
smooth muscle cell | 9.95e-07 | 43 |
smooth muscle myoblast | 9.95e-07 | 43 |