FFCP PHASE1:Hg19::chr2:102720900..102720911,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3554 | |EntrezGene=3554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5993 | |HGNC=5993 | ||
|TSSclassifier=strong | |||
|UniProt=B9A040 | |UniProt=B9A040 | ||
|association_with_transcript=-111bp_to_ENST00000409589_5end | |association_with_transcript=-111bp_to_ENST00000409589_5end | ||
|cluster_id=chr2:102720900..102720911,+ | |||
|description=CAGE_peak_20_at_IL1R1_5end | |description=CAGE_peak_20_at_IL1R1_5end | ||
|id=chr2:102720900..102720911,+ | |id=chr2:102720900..102720911,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.10e-11!180;CL:0000057!7.06e-09!75;CL:0000680!5.19e-07!57;CL:0000056!5.19e-07!57;CL:0000355!5.19e-07!57;CL:0002494!5.98e-07!16 | |ontology_enrichment_celltype=CL:0000055!2.10e-11!180;CL:0000057!7.06e-09!75;CL:0000680!5.19e-07!57;CL:0000056!5.19e-07!57;CL:0000355!5.19e-07!57;CL:0002494!5.98e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002548;2.75e-25;6!CL:0002494;7.51e-18;16!CL:0002195;1.93e-13;2!CL:0002571;1.93e-13;2!CL:0000453;1.20e-11;5!CL:0000632;4.14e-09;3!CL:0000746;4.14e-09;3!CL:0000511;2.82e-07;1!CL:0002625;2.82e-07;1!CL:0002557;2.82e-07;1!CL:0000216;2.82e-07;1!CL:0000737;4.91e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002548,6.06e-25,6;CL:0002494,1.13e-17,16;CL:0002195,1.82e-13,2;CL:0002571,1.82e-13,2;CL:0000453,7.48e-12,5;CL:0000632,3.38e-09,3;CL:0000746,4.15e-09,3;CL:0000513,4.15e-09,3;CL:0000057,1.53e-07,76;CL:0000511,2.07e-07,1;CL:0002625,2.07e-07,1;CL:0000216,2.07e-07,1;CL:0002557,4.90e-07,1;CL:0000737,4.92e-07,4;CL:0000990,8.84e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000513;4.14e-09;3!UBERON:0005754;8.80e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5662;2.82e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,2.83e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005256!9.01e-07!143;UBERON:0002385!9.91e-07!63;UBERON:0001015!9.91e-07!63;UBERON:0000383!9.91e-07!63 | |ontology_enrichment_uberon=UBERON:0005256!9.01e-07!143;UBERON:0002385!9.91e-07!63;UBERON:0001015!9.91e-07!63;UBERON:0000383!9.91e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.64e-15;19!UBERON:0006925;5.64e-15;19!UBERON:0005904;2.44e-14;4!UBERON:0000948;9.42e-13;22!UBERON:0002423;3.56e-11;25!UBERON:0007100;4.05e-11;25!UBERON:0006947;3.31e-09;3!UBERON:0004054;3.31e-09;3!UBERON:0002365;6.15e-09;31!UBERON:0002330;6.15e-09;31!UBERON:0002368;5.11e-08;33!UBERON:0000998;8.80e-08;1!UBERON:0006868;8.80e-08;1!UBERON:0001000;2.82e-07;1!UBERON:0001136;2.82e-07;1!UBERON:0001343;2.82e-07;1!UBERON:0004910;2.82e-07;1!UBERON:0004813;2.82e-07;1!UBERON:0005352;2.82e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.13e-15,19;UBERON:0006925,4.13e-15,19;UBERON:0008836,4.13e-15,19;UBERON:0000948,7.63e-15,24;UBERON:0005498,7.63e-15,24;UBERON:0004140,7.63e-15,24;UBERON:0009881,7.63e-15,24;UBERON:0004141,7.63e-15,24;UBERON:0003084,7.63e-15,24;UBERON:0007005,7.63e-15,24;UBERON:0004139,7.63e-15,24;UBERON:0004291,7.63e-15,24;UBERON:0005904,1.38e-14,4;UBERON:0007100,4.55e-13,27;UBERON:0008835,6.23e-13,22;UBERON:0003894,6.23e-13,22;UBERON:0009854,2.48e-12,23;UBERON:0007499,2.82e-11,25;UBERON:0009497,2.82e-11,25;UBERON:0000015,2.82e-11,25;UBERON:0002423,2.82e-11,25;UBERON:0006235,2.82e-11,25;UBERON:0004161,2.82e-11,25;UBERON:0009856,8.29e-11,26;UBERON:0003914,5.43e-10,117;UBERON:0006947,2.43e-09,3;UBERON:0004054,2.43e-09,3;UBERON:0002365,6.36e-09,31;UBERON:0002330,6.36e-09,31;UBERON:0001048,1.34e-08,160;UBERON:0002368,8.38e-08,35;UBERON:0000998,9.10e-08,1;UBERON:0006868,9.10e-08,1;UBERON:0001000,1.72e-07,1;UBERON:0005352,1.72e-07,1;UBERON:0001136,2.07e-07,1;UBERON:0001343,2.07e-07,1;UBERON:0004910,2.07e-07,1;UBERON:0005154,2.07e-07,1;UBERON:0005295,2.07e-07,1;UBERON:0004813,2.07e-07,1;UBERON:0005297,2.07e-07,1;UBERON:0005294,2.07e-07,1;UBERON:0010141,2.07e-07,1;UBERON:0005891,2.07e-07,1;UBERON:0003103,3.59e-07,68;UBERON:0005256,4.35e-07,122;UBERON:0004872,8.88e-07,83 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0.655324116390517,0.263766978228454,0.123766352960047,0.994192127183747,0,0,0,0,0.738726348460727,0,0.313454721478088,0.286235987131057,0.273748850145768,0,0.0764134057479513,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.891283655081389,0.294605907474837,0.221533894583621,0.270803863765016,2.0494611156108,2.9913649938772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,2.68511379871414,0,0,0,0.795285947051099,0.973269740605272,0.189069634328136,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.633152558322899,0.132409180813219,2.58152958673932,0.709336764396714,1.12135520028461,1.06748995729705,0,3.11211035399766,1.0776853765575,2.28846664358842,0.756787138224657,0,0.468642863667593,0,0,0,0.117434498643765,0,0.140450806702248,0.61246251376468,0,1.03325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0.300476117813194,1.02088964844019,0.179389635688862,0.213557388818567,0.211931901159562,0,0.309157587715317,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.736399189138395,1.45481451136931,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,2.8810180793198,1.47008711385542,3.80265104465493,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,4.71827379071887,5.96883765930587,0.823240336780769,0,1.42156779497018,0,0,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0,0.623912584592421,0,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,0.303127571446259,1.66435439510497,0,0,0,0,0.512556597022804,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0.137836572484531,0.751941714077915,0.580066775656914,0.255679882248303,0.356128142586949,0,0,0,0,0,0.31481234683064,0,0.616067160352178,0,0,0,0.286249773483982,0,0,3.62197368455267,0,1.28381696410176,0.636406495851874,0,0.359744915166629,0.54907405947211,0.353437207037059,0.202182481573316,0,0,0.48763373908959,0,0,0.136499911407986,0.424216295861138,0,0.551365343546124,0,0.438450885253763,0,2.62357900818653,0,0.30982349809975,0,0.143411352204052,0.88424136911809,0,0,0.211107635297664,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.593929361665277,0,0,0,0.111308705022906,0.329607748453519,0,0.398495976502139,0,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0.455768223388005,0,0.0897576444097721,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,1.97292201424695,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.435296032902013,0.52418000472609,0.171986032471617,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0.320635281006135,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.196854963029498,0,0.795229689809303,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0.472834243795189,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,1.75862680413699,0,0,0,0.513260513652988,0,0.213574825135389,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0.889811221596536,0,0.302461847526478,0.15543720058278,0.443565449968902,0,0.449803112163605,0,0,0,0,0.601030435988874,0,0,0,0,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,6.04066957402104,1.99297260470045,1.4720885483026,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0.255524855279191,0.535701835878287,0,0,0,0.266107110487916,0,1.37190407549935,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0.214429632529969,0,0,0,0,0,0,0,0.860454717640555,0,0.0852134047591577,3.38709640152743,0.68732060563215,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0.109940516745429,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0,0.124149428591716,0,0.25458863311266,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0.407016343054873,0,0,0,0,0.611207220914332,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0.655324116390517,0.263766978228454,0.123766352960047,0.994192127183747,0,0,0,0,0.738726348460727,0,0.313454721478088,0.286235987131057,0.273748850145768,0,0.0764134057479513,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.891283655081389,0.294605907474837,0.221533894583621,0.270803863765016,2.0494611156108,2.9913649938772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,2.68511379871414,0,0,0,0.795285947051099,0.973269740605272,0.189069634328136,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.633152558322899,0.132409180813219,2.58152958673932,0.709336764396714,1.12135520028461,1.06748995729705,0,3.11211035399766,1.0776853765575,2.28846664358842,0.756787138224657,0,0.468642863667593,0,0,0,0.117434498643765,0,0.140450806702248,0.61246251376468,0,1.03325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0.300476117813194,1.02088964844019,0.179389635688862,0.213557388818567,0.211931901159562,0,0.309157587715317,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.736399189138395,1.45481451136931,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,2.8810180793198,1.47008711385542,3.80265104465493,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,4.71827379071887,5.96883765930587,0.823240336780769,0,1.42156779497018,0,0,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0,0.623912584592421,0,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,0.303127571446259,1.66435439510497,0,0,0,0,0.512556597022804,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0.137836572484531,0.751941714077915,0.580066775656914,0.255679882248303,0.356128142586949,0,0,0,0,0,0.31481234683064,0,0.616067160352178,0,0,0,0.286249773483982,0,0,3.62197368455267,0,1.28381696410176,0.636406495851874,0,0.359744915166629,0.54907405947211,0.353437207037059,0.202182481573316,0,0,0.48763373908959,0,0,0.136499911407986,0.424216295861138,0,0.551365343546124,0,0.438450885253763,0,2.62357900818653,0,0.30982349809975,0,0.143411352204052,0.88424136911809,0,0,0.211107635297664,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.593929361665277,0,0,0,0.111308705022906,0.329607748453519,0,0.398495976502139,0,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0.455768223388005,0,0.0897576444097721,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,1.97292201424695,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.435296032902013,0.52418000472609,0.171986032471617,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0.320635281006135,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.196854963029498,0,0.795229689809303,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0.472834243795189,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,1.75862680413699,0,0,0,0.513260513652988,0,0.213574825135389,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0.889811221596536,0,0.302461847526478,0.15543720058278,0.443565449968902,0,0.449803112163605,0,0,0,0,0.601030435988874,0,0,0,0,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,6.04066957402104,1.99297260470045,1.4720885483026,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0.255524855279191,0.535701835878287,0,0,0,0.266107110487916,0,1.37190407549935,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0.214429632529969,0,0,0,0,0,0,0,0.860454717640555,0,0.0852134047591577,3.38709640152743,0.68732060563215,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0.109940516745429,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0,0.124149428591716,0,0.25458863311266,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0.407016343054873,0,0,0,0,0.611207220914332,0,0,0,0 | ||
|short_description=p20@IL1R1 | |short_description=p20@IL1R1 | ||
}} | }} |
Latest revision as of 01:21, 16 September 2015
Short description: | p20@IL1R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_IL1R1_5end |
Coexpression cluster: | NA |
Association with transcript: | -111bp_to_ENST00000409589_5end |
EntrezGene: | IL1R1 |
HGNC: | 5993 |
UniProt: | B9A040 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 6.06e-25 | 6 |
cardiocyte | 1.13e-17 | 16 |
hepatic stem cell | 1.82e-13 | 2 |
hepatic mesenchymal stem cell | 1.82e-13 | 2 |
Langerhans cell | 7.48e-12 | 5 |
hepatic stellate cell | 3.38e-09 | 3 |
cardiac muscle cell | 4.15e-09 | 3 |
cardiac muscle myoblast | 4.15e-09 | 3 |
fibroblast | 1.53e-07 | 76 |
androgen binding protein secreting cell | 2.07e-07 | 1 |
seminiferous tubule epithelial cell | 2.07e-07 | 1 |
Sertoli cell | 2.07e-07 | 1 |
fibroblast of pulmonary artery | 4.90e-07 | 1 |
striated muscle cell | 4.92e-07 | 4 |
conventional dendritic cell | 8.84e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 2.83e-07 | 1 |