FFCP PHASE1:Hg19::chr14:75230514..75230551,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56252 | |EntrezGene=56252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17798 | |HGNC=17798 | ||
|TSSclassifier=strong | |||
|UniProt=P49750 | |UniProt=P49750 | ||
|association_with_transcript=445bp_to_ENST00000423680_5end | |association_with_transcript=445bp_to_ENST00000423680_5end | ||
|cluster_id=chr14:75230514..75230551,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_3_at_YLPM1_5end | |description=CAGE_peak_3_at_YLPM1_5end | ||
|id=chr14:75230514..75230551,+ | |id=chr14:75230514..75230551,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.58e-08;5!CL:0000623;3.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.47e-08,5;CL:0002028,2.47e-08,5;CL:0000623,4.97e-08,3;CL:0000825,4.97e-08,3;CL:0000791,6.44e-07,18;CL:0000789,6.44e-07,18;CL:0002420,6.44e-07,18;CL:0002419,6.44e-07,18;CL:0000790,6.44e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!5.89e-10!41;UBERON:0001890!5.89e-10!41;UBERON:0006240!5.89e-10!41;UBERON:0001049!1.92e-09!57;UBERON:0005068!1.92e-09!57;UBERON:0006241!1.92e-09!57;UBERON:0007135!1.92e-09!57;UBERON:0003080!2.72e-09!42;UBERON:0002616!9.44e-09!59;UBERON:0000955!1.88e-08!69;UBERON:0006238!1.88e-08!69;UBERON:0001893!1.91e-08!34;UBERON:0002791!3.63e-08!33;UBERON:0001869!3.68e-08!32;UBERON:0002020!4.25e-08!34;UBERON:0003528!4.25e-08!34;UBERON:0001017!1.48e-07!82;UBERON:0007023!6.05e-07!115;UBERON:0000073!8.45e-07!94;UBERON:0001016!8.45e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.52e-11;41!UBERON:0001890;1.52e-11;41!UBERON:0002791;2.36e-11;32!UBERON:0001869;5.58e-11;32!UBERON:0002619;2.96e-09;22!UBERON:0001893;3.21e-09;34!UBERON:0000073;8.89e-09;53!UBERON:0002616;8.89e-09;53!UBERON:0003528;9.23e-09;34!UBERON:0002020;9.23e-09;34!UBERON:0001950;1.61e-08;20!UBERON:0000956;6.55e-08;25!UBERON:0000203;6.55e-08;25!UBERON:0002114;1.26e-07;2!UBERON:0002021;3.60e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.24e-14,53;UBERON:0002616,4.24e-14,53;UBERON:0002780,4.28e-14,41;UBERON:0001890,4.28e-14,41;UBERON:0003080,4.28e-14,41;UBERON:0006240,4.28e-14,41;UBERON:0001049,4.81e-13,56;UBERON:0005068,4.81e-13,56;UBERON:0006241,4.81e-13,56;UBERON:0007135,4.81e-13,56;UBERON:0002791,8.83e-12,32;UBERON:0001869,8.83e-12,32;UBERON:0000955,1.03e-11,68;UBERON:0006238,1.03e-11,68;UBERON:0003528,6.88e-11,34;UBERON:0002020,6.88e-11,34;UBERON:0001893,6.88e-11,34;UBERON:0001016,2.71e-10,89;UBERON:0001017,5.46e-10,81;UBERON:0002619,7.53e-10,22;UBERON:0003056,4.67e-09,61;UBERON:0001950,4.71e-09,20;UBERON:0000956,2.02e-08,25;UBERON:0000203,2.02e-08,25;UBERON:0002346,2.52e-08,86;UBERON:0003075,4.23e-08,82;UBERON:0007284,4.23e-08,82;UBERON:0002021,1.61e-07,5;UBERON:0002114,2.22e-07,2 | |||
|phase1_expression=0,0.856402095563933,0,1.0007329835313,0.446961094427288,0.872338524100369,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0.436882744260345,0,0,0,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0.684372125364421,0.753255837568817,0.534893840235659,0.821005894499457,0.629686250509434,0.786728553697808,0.767658796194425,0.154816123316076,0,0,0,0.387336002901508,0,0,0,0.401088894940283,0,0,0,0,0.145398238779565,0.377875943688809,0.727752183563449,0.232429036905685,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0.752969358170419,0.545812300115692,0,1.22433556948361,0,0,0,0.797854630486527,0,0.290209238628584,0.56738522469114,1.24564449799115,0,0,0.217188844705117,0,0.736555271975129,0,0,0,0,0.44931452458598,0.450530678524519,0.803627933485401,0,0,0.182664153764634,1.75996244461323,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0,1.32171328579026,0,0.526768169550154,1.57367816091066,1.96505381374582,1.64481199199607,0.167186495390678,0.651844533267181,0.473447805734733,0,0.111410456885174,1.17842362989935,0,1.08321545506006,0.384273959177026,0.390178042679635,0.328875809207352,0.276350017785848,1.15921234294021,0.14828656316206,0.267540828089713,0,0.226618685395132,0.383220493601921,0,1.26509846009751,0.318565414324097,0,0.950452044448374,0.301150238155546,0,1.24930726552346,0.236777252044017,0,1.41124720257313,3.4767225451856,1.44824403882799,2.43806866313962,1.34140171940727,0.12786256184353,0.361439152384566,1.00267582127178,0.144846518960824,0.795285947051099,0.486634870302636,0.472674085820339,0.886917589850256,0.527008714158756,0.261958150995425,0.728590576585084,0,0,0,0,0.238490624305342,0,0.74291500265913,0.198762407366705,0,0,0.56530794192401,0,0.275118041940067,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0.535798369704479,0.44905874525234,0.450445921933289,0,0,0.916008719652036,0,0,0.436094052142534,0,0.506522046658319,0,0,0.354668382198357,0,1.06748995729705,0,0.311211035399766,0.404132016209064,0.326923806226917,0.454072282934794,0.576175924479999,0.468642863667593,0.312160076830321,0,0.298897361103602,0.469737994575059,0.485618833104395,0.140450806702248,0.204154171254893,0.368502951935304,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0,0.500474079487857,0,0.438977620880838,0,0.600952235626387,0,0.358779271377724,0.427114777637135,0.211931901159562,0.600182192168805,0.103052529238439,0.515281080091258,0.18611685633159,0.168776332241266,0.0974370051611986,0.504867548488229,0.460249493211497,0.969876340912871,1.06502877754984,0,0.339121184620975,0.193260853163297,0,0.573609190778008,0.609868530647977,0,0.232387885739037,0.310983165046111,0.252320850875628,0.36497735907583,0,0,2.76269842704961,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0.330881918197182,0.435758888184812,0.71181185733329,0.134831308160164,0.196221465125346,0.769494313892781,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0.441463099414651,0.122988438543114,0.343135620597051,0.109750285408626,0,0.603173834469785,0.185176890317059,0,0,0,0.115930404975077,0.587043471179108,0,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0.335964256397719,0.425325291727159,0.179117045405697,0.581267877027924,0,217.264487912111,0.880484340132261,3.31724984865235,1.29707958075265,2.77733353538036,0.190493682876507,0,0,0,0.102827492703324,0.300343057843917,0,0.336393253036082,0,0.4400297149257,0.129271715757778,0,0,0.531876233169741,0,0.257207374262142,1.41849132023278,0.799266537048298,0.142977993658148,0.542621605391443,0.823240336780769,0.65147236858747,0,0.791951872933429,0,0,0.299918973546171,0,0,0,0,2.29723871668228,0,0,0.410952645100767,0,0.224170287987055,1.77327684181734,1.72502059887614,1.66845947163673,0,2.60279707715243,0.773288812777695,0.335032530668698,0,0.749007023947182,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0,0.535286966391485,0.473107245101804,0,0.601892199455438,0,0,0.664225598535437,0.368738337083406,0.173767228936166,0.391602314925481,0,0.82707210449155,1.72571360654893,0.426910231213777,0,0,0,0.496215615637554,0,0,0,0,0.804269605718038,1.48418066444991,0.308419387605311,0.532685175939381,0.246381468041427,1.55776328755086,0.116210378459959,0,0.200506470303285,0,0.229628896329213,0.546273504020151,0.262248829918848,0,0,0,0,0.316654886678627,1.13733384070897,0.170093705276516,0,1.54227252690289,0,0,0,0,0.223874754722178,0.219259876645935,0,0,0,0,0.309123034943167,0.27470839445503,0.082509499920588,0,0,0,0.193341436584244,0,0.614014698904518,0.137836572484531,0.107420244868274,0.870100163485371,0.340906509664404,0.623224249527161,0.165284915360978,0.192190067365106,0.127612712494584,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0,0,0.18532421910392,0.286249773483982,0,0,0,0.511795582622668,0,0.318203247925937,0.78494864019923,0.179872457583315,0.54907405947211,0,0.404364963146632,0,0.842516912477962,0,0.487426979262569,1.05650146756755,0.136499911407986,0.424216295861138,0,0.551365343546124,0.66343897524122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| ||
|short_description=p3@YLPM1 | |short_description=p3@YLPM1 | ||
}} | }} |
Latest revision as of 01:40, 16 September 2015
Short description: | p3@YLPM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_YLPM1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 445bp_to_ENST00000423680_5end |
EntrezGene: | YLPM1 |
HGNC: | 17798 |
UniProt: | P49750 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.47e-08 | 5 |
basophil mast progenitor cell | 2.47e-08 | 5 |
natural killer cell | 4.97e-08 | 3 |
pro-NK cell | 4.97e-08 | 3 |
mature alpha-beta T cell | 6.44e-07 | 18 |
alpha-beta T cell | 6.44e-07 | 18 |
immature T cell | 6.44e-07 | 18 |
mature T cell | 6.44e-07 | 18 |
immature alpha-beta T cell | 6.44e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.24e-14 | 53 |
regional part of brain | 4.24e-14 | 53 |
regional part of forebrain | 4.28e-14 | 41 |
forebrain | 4.28e-14 | 41 |
anterior neural tube | 4.28e-14 | 41 |
future forebrain | 4.28e-14 | 41 |
neural tube | 4.81e-13 | 56 |
neural rod | 4.81e-13 | 56 |
future spinal cord | 4.81e-13 | 56 |
neural keel | 4.81e-13 | 56 |
regional part of telencephalon | 8.83e-12 | 32 |
cerebral hemisphere | 8.83e-12 | 32 |
brain | 1.03e-11 | 68 |
future brain | 1.03e-11 | 68 |
brain grey matter | 6.88e-11 | 34 |
gray matter | 6.88e-11 | 34 |
telencephalon | 6.88e-11 | 34 |
nervous system | 2.71e-10 | 89 |
central nervous system | 5.46e-10 | 81 |
regional part of cerebral cortex | 7.53e-10 | 22 |
pre-chordal neural plate | 4.67e-09 | 61 |
neocortex | 4.71e-09 | 20 |
cerebral cortex | 2.02e-08 | 25 |
pallium | 2.02e-08 | 25 |
neurectoderm | 2.52e-08 | 86 |
neural plate | 4.23e-08 | 82 |
presumptive neural plate | 4.23e-08 | 82 |
occipital lobe | 1.61e-07 | 5 |
duodenum | 2.22e-07 | 2 |