FFCP PHASE1:Hg19::chr1:112282160..112282175,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:112282160..112282175,+
|short_description=p3@LOC100506343
|description=CAGE_peak_3_at_LOC100506343_5end
|association_with_transcript=-287bp_to_ENST00000430...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100506343 | |EntrezGene=100506343 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-287bp_to_ENST00000430373,NR_038951,NR_038952,uc001ebq.1_5end | |||
|cluster_id=chr1:112282160..112282175,+ | |||
|description=CAGE_peak_3_at_LOC100506343_5end | |||
|id=chr1:112282160..112282175,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.43e-33;5!CL:0000163;5.33e-19;9!CL:0002262;2.72e-10;2!CL:1000398;2.72e-10;2!CL:0002575;2.72e-10;2!CL:0002577;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.43e-33,5;CL:0002028,1.43e-33,5;CL:0000163,5.33e-19,9;CL:0002262,2.49e-10,2;CL:1000398,2.49e-10,2;CL:0002575,3.58e-10,2;CL:0002577,2.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.72e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002791!1.62e-08!33;UBERON:0001869!3.49e-08!32;UBERON:0001893!4.25e-08!34;UBERON:0002020!2.20e-07!34;UBERON:0003528!2.20e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001876;2.72e-10;2!UBERON:0001873;2.72e-10;2!UBERON:0001281;2.72e-10;2!UBERON:0003497;2.72e-10;2!UBERON:0003909;2.72e-10;2!UBERON:0003835;2.72e-10;2!UBERON:0002420;6.35e-09;9!UBERON:0007245;6.35e-09;9!UBERON:0010009;6.35e-09;9!UBERON:0010011;6.35e-09;9!UBERON:0000454;6.35e-09;9!UBERON:0002114;2.79e-07;2!UBERON:0001280;2.79e-07;3!UBERON:0004647;2.79e-07;3!UBERON:0005383;2.79e-07;3!UBERON:0005382;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,2.07e-10,2;UBERON:0010122,2.07e-10,2;UBERON:0001281,2.49e-10,2;UBERON:0003497,2.49e-10,2;UBERON:0003909,2.49e-10,2;UBERON:0003835,2.49e-10,2;UBERON:0001876,3.27e-10,2;UBERON:0002420,6.11e-09,9;UBERON:0007245,6.11e-09,9;UBERON:0010009,6.11e-09,9;UBERON:0010011,6.11e-09,9;UBERON:0000454,6.11e-09,9;UBERON:0005383,2.32e-07,3;UBERON:0005382,2.32e-07,3;UBERON:0001280,2.63e-07,3;UBERON:0004647,2.63e-07,3;UBERON:0005171,2.63e-07,3;UBERON:0002114,2.79e-07,2 | |||
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| ||
|short_description=p3@LOC100506343 | |||
}} | }} |
Latest revision as of 03:58, 16 September 2015
Short description: | p3@LOC100506343 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC100506343_5end |
Coexpression cluster: | NA |
Association with transcript: | -287bp_to_ENST00000430373, NR_038951, NR_038952, uc001ebq.1_5end |
EntrezGene: | LOC100506343 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.43e-33 | 5 |
basophil mast progenitor cell | 1.43e-33 | 5 |
endocrine cell | 5.33e-19 | 9 |
endothelial cell of sinusoid | 2.49e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.49e-10 | 2 |
central nervous system pericyte | 3.58e-10 | 2 |
placental epithelial cell | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 2.07e-10 | 2 |
future caudate nucleus | 2.07e-10 | 2 |
hepatic sinusoid | 2.49e-10 | 2 |
abdomen blood vessel | 2.49e-10 | 2 |
sinusoid | 2.49e-10 | 2 |
abdominal segment blood vessel | 2.49e-10 | 2 |
amygdala | 3.27e-10 | 2 |
basal ganglion | 6.11e-09 | 9 |
nuclear complex of neuraxis | 6.11e-09 | 9 |
aggregate regional part of brain | 6.11e-09 | 9 |
collection of basal ganglia | 6.11e-09 | 9 |
cerebral subcortex | 6.11e-09 | 9 |
caudate-putamen | 2.32e-07 | 3 |
dorsal striatum | 2.32e-07 | 3 |
liver parenchyma | 2.63e-07 | 3 |
liver lobule | 2.63e-07 | 3 |
hepatic duct | 2.63e-07 | 3 |
duodenum | 2.79e-07 | 2 |