FFCP PHASE1:Hg19::chr1:112939121..112939137,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:112939121..112939137,+ to FFCP PHASE1:Hg19::chr1:112939121..112939137,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55917 | |EntrezGene=55917 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25330 | |HGNC=25330 | ||
|TSSclassifier=strong | |||
|UniProt=B1AMN7 | |UniProt=B1AMN7 | ||
|association_with_transcript=-3bp_to_ENST00000441739_5end | |||
|cluster_id=chr1:112939121..112939137,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_5_at_CTTNBP2NL_5end | |||
|id=chr1:112939121..112939137,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.45e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000453;3.00e-17;5!CL:0000306;2.38e-12;4!CL:0002222;2.38e-12;4!CL:0002224;2.38e-12;4!CL:0002262;6.74e-11;2!CL:1000398;6.74e-11;2!CL:0000990;1.27e-09;8!CL:0000451;7.04e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.66e-17,5;CL:0000306,3.07e-12,4;CL:0002222,3.07e-12,4;CL:0002224,3.07e-12,4;CL:0002262,6.13e-11,2;CL:1000398,6.13e-11,2;CL:0000990,9.25e-10,8;CL:0000451,5.44e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;7.47e-07;1!DOID:4549;7.47e-07;1!DOID:5861;7.47e-07;1!DOID:6496;7.47e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.49e-07,1;DOID:4549,7.49e-07,1;DOID:5861,7.49e-07,1;DOID:6496,7.49e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000467!1.67e-10!625;UBERON:0000480!2.31e-10!626;UBERON:0000468!2.32e-10!659;UBERON:0000477!1.02e-08!286;UBERON:0000062!7.86e-08!511;UBERON:0002049!1.73e-07!79;UBERON:0007798!1.73e-07!79;UBERON:0000033!3.46e-07!123;UBERON:0000153!3.67e-07!129;UBERON:0007811!3.67e-07!129;UBERON:0000475!4.32e-07!365;UBERON:0000922!4.74e-07!612;UBERON:0001049!7.81e-07!57;UBERON:0005068!7.81e-07!57;UBERON:0006241!7.81e-07!57;UBERON:0007135!7.81e-07!57;UBERON:0000923!9.08e-07!604;UBERON:0005291!9.08e-07!604;UBERON:0006598!9.08e-07!604;UBERON:0002532!9.08e-07!604;UBERON:0003075!9.15e-07!86;UBERON:0007284!9.15e-07!86;UBERON:0000483!9.31e-07!309;UBERON:0000055!9.60e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;2.38e-12;4!UBERON:0005389;2.38e-12;4!UBERON:0000484;2.38e-12;4!UBERON:0000965;2.38e-12;4!UBERON:0001803;2.38e-12;4!UBERON:0001281;6.74e-11;2!UBERON:0003497;6.74e-11;2!UBERON:0003909;6.74e-11;2!UBERON:0003835;6.74e-11;2!UBERON:0001280;1.52e-07;3!UBERON:0004647;1.52e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,3.07e-12,4;UBERON:0005389,3.07e-12,4;UBERON:0000484,3.07e-12,4;UBERON:0002546,3.07e-12,4;UBERON:0000965,3.07e-12,4;UBERON:0001803,3.07e-12,4;UBERON:0003073,3.07e-12,4;UBERON:0005426,3.07e-12,4;UBERON:0001281,6.13e-11,2;UBERON:0003497,6.13e-11,2;UBERON:0003909,6.13e-11,2;UBERON:0003835,6.13e-11,2;UBERON:0001280,1.43e-07,3;UBERON:0004647,1.43e-07,3;UBERON:0005171,1.43e-07,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.662794751455832,0,0.602694528023977,0,0,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0.382067028739756,0.328402357799783,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0.32389366601898,0,0.436194716338694,0.755751887377619,0.242584061187816,0.464858073811369,0.411167888021826,0,0,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0.752969358170419,0.272906150057846,0,0,0,0,0,0.398927315243264,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0.795285947051099,0,0.0945348171640679,0.443458794925128,0.614843499851882,0.196468613246569,0,0,0,0.348259474598534,0.132957960518865,0,0,0,1.39133685156694,0,0.347140501607594,0.56530794192401,0.838998872419812,0.550236083880135,0.208994966536811,0,1.77883131343355,0.66944122552934,0.402829317109147,0,0.488124115096339,0.735326160691737,1.62028389576352,0.714397826272638,0.22452937262617,0.450445921933289,0,0,0.549605231791222,0,0,0,0.496971951695318,0.12663051166458,1.19168262731897,0.573673241497627,0,0,0,0,0,0.404132016209064,0,0,0,0,0,0.570471821544449,0,0.23486899728753,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,2.47266929278557,0,0,0,0.375355559615893,0.277064115484183,0.877955241761676,1.83892677479412,0.901428353439581,0,1.4351170855109,0.213557388818567,0,1.20036438433761,0.515262646192195,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.276149695926898,0,0.710019185033229,0.302256294682921,0,0.386521706326594,0.272746120590835,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0.928735856063958,0,0,0.168584690078102,0,0.55146986366197,0,0,0.134831308160164,0.392442930250692,0,1.4763109092493,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0.109750285408626,0,0,0.462942225792648,0,0,2.88662684050547,0,2.34817388471643,0.721832238805369,0.462985512576611,0.570762456703795,0,0,0,1.17002132569619,0,0,1.34385702559088,0.283550194484773,0.0895585227028483,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0.301439377059586,2.61460037580088,1.69954085009497,0,0,2.10833939483032,0.239624855491583,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.24538298343828,0,0,0.623912584592421,0.178428988797162,0.630809660135739,0.234282829985426,0,0,0,0.664225598535437,0,0.260650843404249,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.561320188866147,0.256278298511402,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0.802025881213139,0,0.114814448164607,0.364182336013434,0.393373244878272,0,0.231046011313244,0,0,0.73886140225013,1.13733384070897,0.170093705276516,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0.256450125116389,0.984043937099117,0,0.515205058238611,0.27470839445503,0.495056999523528,0,0,1.6068392984416,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0,0,0.382838137483752,0,0.464845549297286,1.25924938732256,0,0,0.532306030317022,0.869932992075073,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0,0.539617372749944,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0.731140468893853,0,0,0.424216295861138,0,0,0,0.438450885253763,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0.0982490410131212,0.35667105148125,0,0,0,0,0,0.192444225451024,0,0,0.376575203107117,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0.222886768554957,0,0.23874448473769,0.296964680832639,0.307160702099232,0.994147647766298,0.422008249231538,0.222617410045812,0,0,0.19924798825107,0.828851746593443,0,0.409074730008619,0,1.24415835064723,0,0,0,0.493217028184668,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.331737779793674,0,0.219385397153973,0,0,0.153900517007594,0.113942055847001,0,0.0897576444097721,0,0.638002319463839,0.549585560411174,0,0,0,0,0,0,0,0,0,0.843992258112108,0.979396848954886,0,0.216388639742091,0.995261931078505,0.353830258013357,2.4441205797345,2.07564790076435,0.370691816839509,0,0.337005664903385,0.802577647298789,0.468528891450678,0,0,0,0,0,1.83643656978294,0.379119477770928,0.300646838828985,0.103688191397247,0,0,0.313932918407225,0,0,1.52542140314453,0.173559738335131,0.0979923974143777,0,0.17472666824203,0,0,0.146178634172371,0,0.290967049465258,36.8910609570471,0.677942222341597,0,0.19871461170299,0.253243183823515,0,0,0.213452994739353,0,0,0.114536596165916,0.171594997861965,0,0.248505071130865,0,0,0.104602846312333,0,0,0,0.410716136675979,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0.223171457441873,0.335917362433631,0.36029988354240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| 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| ||
|short_description=p5@CTTNBP2NL | |||
}} | }} |
Latest revision as of 04:25, 16 September 2015
Short description: | p5@CTTNBP2NL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CTTNBP2NL_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -3bp_to_ENST00000441739_5end |
EntrezGene: | CTTNBP2NL |
HGNC: | 25330 |
UniProt: | B1AMN7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.66e-17 | 5 |
crystallin accumulating cell | 3.07e-12 | 4 |
vertebrate lens cell | 3.07e-12 | 4 |
lens epithelial cell | 3.07e-12 | 4 |
endothelial cell of sinusoid | 6.13e-11 | 2 |
endothelial cell of hepatic sinusoid | 6.13e-11 | 2 |
conventional dendritic cell | 9.25e-10 | 8 |
dendritic cell | 5.44e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 3.07e-12 | 4 |
transparent eye structure | 3.07e-12 | 4 |
simple cuboidal epithelium | 3.07e-12 | 4 |
cranial placode | 3.07e-12 | 4 |
lens of camera-type eye | 3.07e-12 | 4 |
epithelium of lens | 3.07e-12 | 4 |
lens placode | 3.07e-12 | 4 |
lens vesicle | 3.07e-12 | 4 |
hepatic sinusoid | 6.13e-11 | 2 |
abdomen blood vessel | 6.13e-11 | 2 |
sinusoid | 6.13e-11 | 2 |
abdominal segment blood vessel | 6.13e-11 | 2 |
liver parenchyma | 1.43e-07 | 3 |
liver lobule | 1.43e-07 | 3 |
hepatic duct | 1.43e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.49e-07 | 1 |
extraosseous chondrosarcoma | 7.49e-07 | 1 |
myxoid chondrosarcoma | 7.49e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 7.49e-07 | 1 |