FFCP PHASE1:Hg19::chr7:128578070..128578077,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:128578070..128578077,+ to FFCP PHASE1:Hg19::chr7:128578070..128578077,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3663 | |EntrezGene=3663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6120 | |HGNC=6120 | ||
|TSSclassifier=strong | |||
|UniProt=F8WDH6 | |UniProt=F8WDH6 | ||
|association_with_transcript=25bp_to_ENST00000473787_5end | |||
|cluster_id=chr7:128578070..128578077,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_3_at_IRF5_5end | |||
|id=chr7:128578070..128578077,+ | |||
|ontology_enrichment_celltype=CL:0002009!2.96e-51!65;CL:0000557!5.39e-49!71;CL:0002194!6.52e-49!63;CL:0000576!6.52e-49!63;CL:0000040!6.52e-49!63;CL:0000559!6.52e-49!63;CL:0000839!8.92e-46!70;CL:0000766!1.25e-44!76;CL:0000738!4.96e-43!140;CL:0002057!5.08e-43!42;CL:0000763!1.32e-42!112;CL:0000049!1.32e-42!112;CL:0002087!2.61e-40!119;CL:0002032!2.77e-40!165;CL:0000837!2.77e-40!165;CL:0000037!6.11e-40!172;CL:0000566!6.11e-40!172;CL:0000860!3.17e-39!45;CL:0002031!5.30e-39!124;CL:0000988!2.20e-38!182;CL:0000990!8.90e-13!8;CL:0000451!5.01e-10!10;CL:0002393!7.91e-10!9;CL:0002397!7.91e-10!9;CL:0000840!5.25e-09!5;CL:0001029!5.25e-09!5;CL:0000134!8.75e-09!358;CL:0002320!3.31e-08!365;CL:0000453!1.21e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.90e-58;33!CL:0002057;6.90e-58;33!CL:0000473;2.78e-47;39!CL:0000234;2.78e-47;39!CL:0000576;3.99e-39;48!CL:0000766;7.29e-21;69!CL:0000763;4.98e-13;100!CL:0000840;1.97e-09;5!CL:0002087;3.55e-09;104!CL:0000738;4.25e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,6.08e-69,59;CL:0000576,6.08e-69,59;CL:0000040,6.08e-69,59;CL:0000559,6.08e-69,59;CL:0000473,1.26e-68,48;CL:0000234,1.26e-68,48;CL:0002009,1.48e-66,61;CL:0000860,7.67e-66,42;CL:0002057,7.67e-66,42;CL:0000839,3.25e-61,66;CL:0000557,3.07e-60,67;CL:0000766,9.09e-56,72;CL:0002087,6.26e-39,115;CL:0000763,1.51e-38,108;CL:0000049,1.51e-38,108;CL:0002031,4.21e-37,120;CL:0000738,3.80e-32,136;CL:0002032,1.91e-28,161;CL:0000837,1.91e-28,161;CL:0000037,4.83e-27,168;CL:0000988,2.12e-25,177;CL:0000134,6.10e-10,354;CL:0002320,1.23e-09,361;CL:0000840,1.68e-09,5;CL:0001029,1.68e-09,5;CL:0000219,1.44e-08,386;CL:0000048,2.93e-07,427;CL:0000723,4.44e-07,433;CL:0000034,7.61e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.31e-48;42!CL:0000049;8.42e-15;108!UBERON:0000358;1.47e-07;1!UBERON:0005754;1.47e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;1.47e-07;1!DOID:0070004;1.47e-07;1!DOID:630;3.10e-07;1!DOID:0050177;3.10e-07;1!DOID:0050427;3.10e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.83e-07,1;DOID:0070004,1.83e-07,1;DOID:630,1.95e-07,1;DOID:0050177,1.95e-07,1;DOID:0050427,1.95e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.83e-43!80;UBERON:0002390!4.71e-41!102;UBERON:0003061!4.71e-41!102;UBERON:0001474!4.03e-39!86;UBERON:0002193!2.80e-38!112;UBERON:0002405!1.36e-32!115;UBERON:0004765!7.78e-32!101;UBERON:0001434!7.78e-32!101;UBERON:0002204!4.58e-13!167;UBERON:0003081!2.49e-11!216;UBERON:0002384!1.97e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.98e-09;3!UBERON:0004054;2.98e-09;3!UBERON:0001000;1.47e-07;1!UBERON:0000998;1.47e-07;1!UBERON:0006868;1.47e-07;1!UBERON:0005352;1.47e-07;1!UBERON:0005904;3.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.07e-57,76;UBERON:0001474,2.16e-52,82;UBERON:0004765,2.48e-47,90;UBERON:0002405,1.18e-45,93;UBERON:0002390,4.35e-43,98;UBERON:0003061,4.35e-43,98;UBERON:0001434,3.94e-42,100;UBERON:0002193,1.18e-38,108;UBERON:0002204,3.17e-23,167;UBERON:0003081,1.48e-21,203;UBERON:0000926,4.34e-13,315;UBERON:0004120,4.34e-13,315;UBERON:0006603,4.34e-13,315;UBERON:0006947,2.53e-09,3;UBERON:0004054,2.53e-09,3;UBERON:0002384,3.18e-09,371;UBERON:0001000,1.25e-07,1;UBERON:0005352,1.25e-07,1;UBERON:0000998,1.33e-07,1;UBERON:0006868,1.33e-07,1;UBERON:0005904,3.41e-07,4 | |||
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| ||
|short_description=p3@IRF5 | |||
}} | }} |
Latest revision as of 04:54, 16 September 2015
Short description: | p3@IRF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IRF5_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 25bp_to_ENST00000473787_5end |
EntrezGene: | IRF5 |
HGNC: | 6120 |
UniProt: | F8WDH6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 6.08e-69 | 59 |
monocyte | 6.08e-69 | 59 |
monoblast | 6.08e-69 | 59 |
promonocyte | 6.08e-69 | 59 |
defensive cell | 1.26e-68 | 48 |
phagocyte | 1.26e-68 | 48 |
macrophage dendritic cell progenitor | 1.48e-66 | 61 |
classical monocyte | 7.67e-66 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.67e-66 | 42 |
myeloid lineage restricted progenitor cell | 3.25e-61 | 66 |
granulocyte monocyte progenitor cell | 3.07e-60 | 67 |
myeloid leukocyte | 9.09e-56 | 72 |
nongranular leukocyte | 6.26e-39 | 115 |
myeloid cell | 1.51e-38 | 108 |
common myeloid progenitor | 1.51e-38 | 108 |
hematopoietic lineage restricted progenitor cell | 4.21e-37 | 120 |
leukocyte | 3.80e-32 | 136 |
hematopoietic oligopotent progenitor cell | 1.91e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.91e-28 | 161 |
hematopoietic stem cell | 4.83e-27 | 168 |
hematopoietic cell | 2.12e-25 | 177 |
mesenchymal cell | 6.10e-10 | 354 |
connective tissue cell | 1.23e-09 | 361 |
immature conventional dendritic cell | 1.68e-09 | 5 |
common dendritic progenitor | 1.68e-09 | 5 |
motile cell | 1.44e-08 | 386 |
multi fate stem cell | 2.93e-07 | 427 |
somatic stem cell | 4.44e-07 | 433 |
stem cell | 7.61e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.07e-57 | 76 |
bone element | 2.16e-52 | 82 |
skeletal element | 2.48e-47 | 90 |
immune system | 1.18e-45 | 93 |
hematopoietic system | 4.35e-43 | 98 |
blood island | 4.35e-43 | 98 |
skeletal system | 3.94e-42 | 100 |
hemolymphoid system | 1.18e-38 | 108 |
musculoskeletal system | 3.17e-23 | 167 |
lateral plate mesoderm | 1.48e-21 | 203 |
mesoderm | 4.34e-13 | 315 |
mesoderm-derived structure | 4.34e-13 | 315 |
presumptive mesoderm | 4.34e-13 | 315 |
male genital duct | 2.53e-09 | 3 |
internal male genitalia | 2.53e-09 | 3 |
connective tissue | 3.18e-09 | 371 |
vas deferens | 1.25e-07 | 1 |
spermatic cord | 1.25e-07 | 1 |
seminal vesicle | 1.33e-07 | 1 |
seminal fluid secreting gland | 1.33e-07 | 1 |
duct of male reproductive system | 3.41e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.83e-07 | 1 |
myeloma | 1.83e-07 | 1 |
genetic disease | 1.95e-07 | 1 |
monogenic disease | 1.95e-07 | 1 |
xeroderma pigmentosum | 1.95e-07 | 1 |