FFCP PHASE1:Hg19::chr13:100153689..100153710,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:100153689..100153710,+ to FFCP PHASE1:Hg19::chr13:100153689..100153710,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9375 | |EntrezGene=9375 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11865 | |HGNC=11865 | ||
|TSSclassifier=strong | |||
|UniProt=Q99805 | |UniProt=Q99805 | ||
|association_with_transcript=-17bp_to_ENST00000463123,NM_004800,uc001voj.1,uc010afz.1_5end | |||
|cluster_id=chr13:100153689..100153710,+ | |||
|coexpression_cluster_id=C3349 | |||
|description=CAGE_peak_3_at_TM9SF2_5end | |||
|id=chr13:100153689..100153710,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.19e-21!115;UBERON:0000468!4.81e-19!659;UBERON:0000480!1.02e-18!626;UBERON:0000467!2.73e-18!625;UBERON:0000062!2.44e-17!511;UBERON:0002050!9.62e-12!605;UBERON:0005423!9.62e-12!605;UBERON:0000923!2.00e-11!604;UBERON:0005291!2.00e-11!604;UBERON:0006598!2.00e-11!604;UBERON:0002532!2.00e-11!604;UBERON:0000922!2.26e-11!612;UBERON:0001049!9.20e-11!57;UBERON:0005068!9.20e-11!57;UBERON:0006241!9.20e-11!57;UBERON:0007135!9.20e-11!57;UBERON:0003080!2.82e-10!42;UBERON:0002780!5.28e-10!41;UBERON:0001890!5.28e-10!41;UBERON:0006240!5.28e-10!41;UBERON:0002616!2.42e-09!59;UBERON:0000955!2.45e-08!69;UBERON:0006238!2.45e-08!69;UBERON:0001893!8.04e-08!34;UBERON:0001869!1.44e-07!32;UBERON:0002020!1.78e-07!34;UBERON:0003528!1.78e-07!34;UBERON:0002791!1.83e-07!33;UBERON:0005743!2.09e-07!86;UBERON:0002619!2.71e-07!22;UBERON:0000033!2.85e-07!123;UBERON:0004111!5.56e-07!241;UBERON:0000073!6.78e-07!94;UBERON:0001016!6.78e-07!94;UBERON:0001017!7.03e-07!82;UBERON:0001950!8.70e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.01e-07;41!UBERON:0001890;1.01e-07;41!UBERON:0002619;2.24e-07;22!UBERON:0001869;5.72e-07;32!UBERON:0001950;7.61e-07;20!UBERON:0001893;7.70e-07;34!UBERON:0002791;8.23e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.17e-20,114;UBERON:0002050,1.15e-11,564;UBERON:0000923,7.99e-11,560;UBERON:0010316,7.99e-11,560;UBERON:0005291,7.99e-11,560;UBERON:0006598,7.99e-11,560;UBERON:0010317,7.99e-11,560;UBERON:0002532,7.99e-11,560;UBERON:0005423,9.58e-11,581;UBERON:0001049,1.70e-10,56;UBERON:0005068,1.70e-10,56;UBERON:0006241,1.70e-10,56;UBERON:0007135,1.70e-10,56;UBERON:0002780,5.28e-10,41;UBERON:0001890,5.28e-10,41;UBERON:0003080,5.28e-10,41;UBERON:0006240,5.28e-10,41;UBERON:0000073,1.01e-09,53;UBERON:0002616,1.01e-09,53;UBERON:0000922,1.10e-09,592;UBERON:0011216,5.56e-09,223;UBERON:0000955,4.23e-08,68;UBERON:0006238,4.23e-08,68;UBERON:0001893,8.04e-08,34;UBERON:0001869,1.44e-07,32;UBERON:0003528,1.78e-07,34;UBERON:0002020,1.78e-07,34;UBERON:0002619,2.71e-07,22;UBERON:0002791,2.76e-07,32;UBERON:0004111,5.45e-07,240;UBERON:0001950,8.70e-07,20 | |||
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| ||
|short_description=p3@TM9SF2 | |||
}} | }} |
Latest revision as of 07:18, 16 September 2015
Short description: | p3@TM9SF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TM9SF2_5end |
Coexpression cluster: | C3349_Smooth_Fibroblast_parotid_Preadipocyte_cholangiocellular_Neutrophils_salivary |
Association with transcript: | -17bp_to_ENST00000463123, NM_004800, uc001voj.1, uc010afz.1_5end |
EntrezGene: | TM9SF2 |
HGNC: | 11865 |
UniProt: | Q99805 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.17e-20 | 114 |
embryonic structure | 1.15e-11 | 564 |
germ layer | 7.99e-11 | 560 |
germ layer / neural crest | 7.99e-11 | 560 |
embryonic tissue | 7.99e-11 | 560 |
presumptive structure | 7.99e-11 | 560 |
germ layer / neural crest derived structure | 7.99e-11 | 560 |
epiblast (generic) | 7.99e-11 | 560 |
developing anatomical structure | 9.58e-11 | 581 |
neural tube | 1.70e-10 | 56 |
neural rod | 1.70e-10 | 56 |
future spinal cord | 1.70e-10 | 56 |
neural keel | 1.70e-10 | 56 |
regional part of forebrain | 5.28e-10 | 41 |
forebrain | 5.28e-10 | 41 |
anterior neural tube | 5.28e-10 | 41 |
future forebrain | 5.28e-10 | 41 |
regional part of nervous system | 1.01e-09 | 53 |
regional part of brain | 1.01e-09 | 53 |
embryo | 1.10e-09 | 592 |
organ system subdivision | 5.56e-09 | 223 |
brain | 4.23e-08 | 68 |
future brain | 4.23e-08 | 68 |
telencephalon | 8.04e-08 | 34 |
cerebral hemisphere | 1.44e-07 | 32 |
brain grey matter | 1.78e-07 | 34 |
gray matter | 1.78e-07 | 34 |
regional part of cerebral cortex | 2.71e-07 | 22 |
regional part of telencephalon | 2.76e-07 | 32 |
anatomical conduit | 5.45e-07 | 240 |
neocortex | 8.70e-07 | 20 |