FFCP PHASE1:Hg19::chrX:70752917..70752933,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8473 | |EntrezGene=8473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8127 | |HGNC=8127 | ||
|TSSclassifier=strong | |||
|UniProt=O15294 | |UniProt=O15294 | ||
|association_with_transcript=0bp_to_ENST00000373719,uc004eaa.1,uc004eab.1,uc011mpw.1_5end | |association_with_transcript=0bp_to_ENST00000373719,uc004eaa.1,uc004eab.1,uc011mpw.1_5end | ||
|cluster_id=chrX:70752917..70752933,+ | |||
|description=CAGE_peak_2_at_OGT_5end | |description=CAGE_peak_2_at_OGT_5end | ||
|id=chrX:70752917..70752933,+ | |id=chrX:70752917..70752933,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.25e-18!172;CL:0000566!2.25e-18!172;CL:0000988!1.13e-16!182;CL:0000838!1.95e-16!52;CL:0000542!3.93e-16!53;CL:0000051!3.93e-16!53;CL:0000738!4.03e-16!140;CL:0002032!6.70e-16!165;CL:0000837!6.70e-16!165;CL:0002031!1.98e-13!124;CL:0002087!3.97e-13!119;CL:0000791!4.02e-10!18;CL:0000789!4.02e-10!18;CL:0002420!4.02e-10!18;CL:0002419!4.02e-10!18;CL:0000790!4.02e-10!18;CL:0000084!1.02e-09!25;CL:0000827!1.02e-09!25;CL:0000625!3.43e-07!11;CL:0000945!5.70e-07!24;CL:0000826!5.70e-07!24 | |ontology_enrichment_celltype=CL:0000037!2.25e-18!172;CL:0000566!2.25e-18!172;CL:0000988!1.13e-16!182;CL:0000838!1.95e-16!52;CL:0000542!3.93e-16!53;CL:0000051!3.93e-16!53;CL:0000738!4.03e-16!140;CL:0002032!6.70e-16!165;CL:0000837!6.70e-16!165;CL:0002031!1.98e-13!124;CL:0002087!3.97e-13!119;CL:0000791!4.02e-10!18;CL:0000789!4.02e-10!18;CL:0002420!4.02e-10!18;CL:0002419!4.02e-10!18;CL:0000790!4.02e-10!18;CL:0000084!1.02e-09!25;CL:0000827!1.02e-09!25;CL:0000625!3.43e-07!11;CL:0000945!5.70e-07!24;CL:0000826!5.70e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.95e-10;18!CL:0000789;3.95e-10;18!CL:0002419;3.95e-10;18!CL:0000084;1.20e-09;25!CL:0000542;1.27e-09;53!CL:0000625;3.31e-07;11!CL:0000945;6.04e-07;24 | |ontology_enrichment_celltype_v019=CL:0000791;3.95e-10;18!CL:0000789;3.95e-10;18!CL:0002419;3.95e-10;18!CL:0000084;1.20e-09;25!CL:0000542;1.27e-09;53!CL:0000625;3.31e-07;11!CL:0000945;6.04e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.68e-17,168;CL:0000838,1.95e-16,52;CL:0000988,2.46e-16,177;CL:0000542,3.93e-16,53;CL:0000051,3.93e-16,53;CL:0000738,2.81e-15,136;CL:0002032,4.51e-15,161;CL:0000837,4.51e-15,161;CL:0002031,1.25e-12,120;CL:0002087,2.50e-12,115;CL:0000791,4.02e-10,18;CL:0000789,4.02e-10,18;CL:0002420,4.02e-10,18;CL:0002419,4.02e-10,18;CL:0000790,4.02e-10,18;CL:0000084,1.02e-09,25;CL:0000827,1.02e-09,25;CL:0000625,3.43e-07,11;CL:0000945,5.70e-07,24;CL:0000826,5.70e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;3.95e-10;18!CL:0000051;1.27e-09;53 | |ontology_enrichment_development_v019=CL:0000790;3.95e-10;18!CL:0000051;1.27e-09;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.74e-17!115;UBERON:0001049!3.48e-10!57;UBERON:0005068!3.48e-10!57;UBERON:0006241!3.48e-10!57;UBERON:0007135!3.48e-10!57;UBERON:0002780!1.20e-09!41;UBERON:0001890!1.20e-09!41;UBERON:0006240!1.20e-09!41;UBERON:0003080!3.94e-09!42;UBERON:0000955!1.95e-08!69;UBERON:0006238!1.95e-08!69;UBERON:0000073!3.41e-08!94;UBERON:0001016!3.41e-08!94;UBERON:0002616!4.31e-08!59;UBERON:0001893!6.34e-08!34;UBERON:0001017!1.05e-07!82;UBERON:0001869!1.05e-07!32;UBERON:0002791!1.13e-07!33;UBERON:0002020!1.39e-07!34;UBERON:0003528!1.39e-07!34;UBERON:0002619!1.64e-07!22;UBERON:0005743!4.07e-07!86;UBERON:0001950!4.25e-07!20;UBERON:0000178!4.56e-07!15;UBERON:0000179!4.56e-07!15;UBERON:0000463!4.56e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!4.74e-17!115;UBERON:0001049!3.48e-10!57;UBERON:0005068!3.48e-10!57;UBERON:0006241!3.48e-10!57;UBERON:0007135!3.48e-10!57;UBERON:0002780!1.20e-09!41;UBERON:0001890!1.20e-09!41;UBERON:0006240!1.20e-09!41;UBERON:0003080!3.94e-09!42;UBERON:0000955!1.95e-08!69;UBERON:0006238!1.95e-08!69;UBERON:0000073!3.41e-08!94;UBERON:0001016!3.41e-08!94;UBERON:0002616!4.31e-08!59;UBERON:0001893!6.34e-08!34;UBERON:0001017!1.05e-07!82;UBERON:0001869!1.05e-07!32;UBERON:0002791!1.13e-07!33;UBERON:0002020!1.39e-07!34;UBERON:0003528!1.39e-07!34;UBERON:0002619!1.64e-07!22;UBERON:0005743!4.07e-07!86;UBERON:0001950!4.25e-07!20;UBERON:0000178!4.56e-07!15;UBERON:0000179!4.56e-07!15;UBERON:0000463!4.56e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.51e-07;22!UBERON:0002780;2.57e-07;41!UBERON:0001890;2.57e-07;41!UBERON:0001950;3.91e-07;20!UBERON:0000178;4.44e-07;15!UBERON:0000179;4.44e-07;15!UBERON:0000463;4.44e-07;15!UBERON:0001869;4.98e-07;32!UBERON:0001893;5.30e-07;34!UBERON:0003528;6.08e-07;34!UBERON:0002020;6.08e-07;34!UBERON:0002791;6.40e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0002619;1.51e-07;22!UBERON:0002780;2.57e-07;41!UBERON:0001890;2.57e-07;41!UBERON:0001950;3.91e-07;20!UBERON:0000178;4.44e-07;15!UBERON:0000179;4.44e-07;15!UBERON:0000463;4.44e-07;15!UBERON:0001869;4.98e-07;32!UBERON:0001893;5.30e-07;34!UBERON:0003528;6.08e-07;34!UBERON:0002020;6.08e-07;34!UBERON:0002791;6.40e-07;32 | ||
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| ||
|short_description=p2@OGT | |short_description=p2@OGT | ||
}} | }} |
Latest revision as of 07:23, 16 September 2015
Short description: | p2@OGT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OGT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000373719, uc004eaa.1, uc004eab.1, uc011mpw.1_5end |
EntrezGene: | OGT |
HGNC: | 8127 |
UniProt: | O15294 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.68e-17 | 168 |
lymphoid lineage restricted progenitor cell | 1.95e-16 | 52 |
hematopoietic cell | 2.46e-16 | 177 |
lymphocyte | 3.93e-16 | 53 |
common lymphoid progenitor | 3.93e-16 | 53 |
leukocyte | 2.81e-15 | 136 |
hematopoietic oligopotent progenitor cell | 4.51e-15 | 161 |
hematopoietic multipotent progenitor cell | 4.51e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 1.25e-12 | 120 |
nongranular leukocyte | 2.50e-12 | 115 |
mature alpha-beta T cell | 4.02e-10 | 18 |
alpha-beta T cell | 4.02e-10 | 18 |
immature T cell | 4.02e-10 | 18 |
mature T cell | 4.02e-10 | 18 |
immature alpha-beta T cell | 4.02e-10 | 18 |
T cell | 1.02e-09 | 25 |
pro-T cell | 1.02e-09 | 25 |
CD8-positive, alpha-beta T cell | 3.43e-07 | 11 |
lymphocyte of B lineage | 5.70e-07 | 24 |
pro-B cell | 5.70e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.88e-17 | 114 |
neural tube | 1.21e-10 | 56 |
neural rod | 1.21e-10 | 56 |
future spinal cord | 1.21e-10 | 56 |
neural keel | 1.21e-10 | 56 |
regional part of nervous system | 3.02e-10 | 53 |
regional part of brain | 3.02e-10 | 53 |
regional part of forebrain | 1.20e-09 | 41 |
forebrain | 1.20e-09 | 41 |
anterior neural tube | 1.20e-09 | 41 |
future forebrain | 1.20e-09 | 41 |
nervous system | 4.11e-09 | 89 |
brain | 8.75e-09 | 68 |
future brain | 8.75e-09 | 68 |
central nervous system | 5.34e-08 | 81 |
telencephalon | 6.34e-08 | 34 |
cerebral hemisphere | 1.05e-07 | 32 |
brain grey matter | 1.39e-07 | 34 |
gray matter | 1.39e-07 | 34 |
regional part of cerebral cortex | 1.64e-07 | 22 |
regional part of telencephalon | 1.66e-07 | 32 |
neocortex | 4.25e-07 | 20 |
blood | 4.56e-07 | 15 |
haemolymphatic fluid | 4.56e-07 | 15 |
organism substance | 4.56e-07 | 15 |