FFCP PHASE1:Hg19::chr16:30390232..30390261,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1731 | |EntrezGene=1731 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2879 | |HGNC=2879 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-170bp_to_uc002dxw.2_5end | |association_with_transcript=-170bp_to_uc002dxw.2_5end | ||
|cluster_id=chr16:30390232..30390261,- | |||
|description=CAGE_peak_4_at_SEPT1_5end | |description=CAGE_peak_4_at_SEPT1_5end | ||
|id=chr16:30390232..30390261,- | |id=chr16:30390232..30390261,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.57e-17!115;UBERON:0001049!7.45e-14!57;UBERON:0005068!7.45e-14!57;UBERON:0006241!7.45e-14!57;UBERON:0007135!7.45e-14!57;UBERON:0002616!2.12e-12!59;UBERON:0000955!3.10e-12!69;UBERON:0006238!3.10e-12!69;UBERON:0003080!6.04e-11!42;UBERON:0002780!2.22e-10!41;UBERON:0001890!2.22e-10!41;UBERON:0006240!2.22e-10!41;UBERON:0001017!2.01e-09!82;UBERON:0003075!2.76e-09!86;UBERON:0007284!2.76e-09!86;UBERON:0005743!8.36e-09!86;UBERON:0002346!1.47e-08!90;UBERON:0002020!1.65e-08!34;UBERON:0003528!1.65e-08!34;UBERON:0002791!3.02e-08!33;UBERON:0001893!3.62e-08!34;UBERON:0003056!2.59e-07!61;UBERON:0001869!2.65e-07!32;UBERON:0000073!2.65e-07!94;UBERON:0001016!2.65e-07!94;UBERON:0000153!3.38e-07!129;UBERON:0007811!3.38e-07!129;UBERON:0000033!4.07e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.69e-09;41!UBERON:0001890;3.69e-09;41!UBERON:0002791;3.24e-08;32!UBERON:0000073;4.34e-08;53!UBERON:0002616;4.34e-08;53!UBERON:0003528;8.88e-08;34!UBERON:0002020;8.88e-08;34!UBERON:0001893;2.05e-07;34!UBERON:0001869;6.05e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.04e-16,114;UBERON:0001049,1.90e-14,56;UBERON:0005068,1.90e-14,56;UBERON:0006241,1.90e-14,56;UBERON:0007135,1.90e-14,56;UBERON:0000073,1.41e-13,53;UBERON:0002616,1.41e-13,53;UBERON:0002780,8.12e-12,41;UBERON:0001890,8.12e-12,41;UBERON:0003080,8.12e-12,41;UBERON:0006240,8.12e-12,41;UBERON:0000955,1.93e-10,68;UBERON:0006238,1.93e-10,68;UBERON:0003528,8.91e-10,34;UBERON:0002020,8.91e-10,34;UBERON:0010314,3.98e-09,132;UBERON:0002791,5.94e-09,32;UBERON:0001893,6.68e-09,34;UBERON:0003075,1.04e-08,82;UBERON:0007284,1.04e-08,82;UBERON:0001017,1.35e-08,81;UBERON:0010371,8.46e-08,104;UBERON:0001869,8.54e-08,32;UBERON:0002346,1.16e-07,86;UBERON:0003056,1.76e-07,61;UBERON:0000125,4.59e-07,9;UBERON:0002308,4.59e-07,9;UBERON:0001016,9.12e-07,89 | |||
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| ||
|short_description=p4@SEPT1 | |short_description=p4@SEPT1 | ||
}} | }} |
Latest revision as of 07:33, 16 September 2015
Short description: | p4@SEPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEPT1_5end |
Coexpression cluster: | NA |
Association with transcript: | -170bp_to_uc002dxw.2_5end |
EntrezGene: | SEPT1 |
HGNC: | 2879 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.04e-16 | 114 |
neural tube | 1.90e-14 | 56 |
neural rod | 1.90e-14 | 56 |
future spinal cord | 1.90e-14 | 56 |
neural keel | 1.90e-14 | 56 |
regional part of nervous system | 1.41e-13 | 53 |
regional part of brain | 1.41e-13 | 53 |
regional part of forebrain | 8.12e-12 | 41 |
forebrain | 8.12e-12 | 41 |
anterior neural tube | 8.12e-12 | 41 |
future forebrain | 8.12e-12 | 41 |
brain | 1.93e-10 | 68 |
future brain | 1.93e-10 | 68 |
brain grey matter | 8.91e-10 | 34 |
gray matter | 8.91e-10 | 34 |
structure with developmental contribution from neural crest | 3.98e-09 | 132 |
regional part of telencephalon | 5.94e-09 | 32 |
telencephalon | 6.68e-09 | 34 |
neural plate | 1.04e-08 | 82 |
presumptive neural plate | 1.04e-08 | 82 |
central nervous system | 1.35e-08 | 81 |
ecto-epithelium | 8.46e-08 | 104 |
cerebral hemisphere | 8.54e-08 | 32 |
neurectoderm | 1.16e-07 | 86 |
pre-chordal neural plate | 1.76e-07 | 61 |
neural nucleus | 4.59e-07 | 9 |
nucleus of brain | 4.59e-07 | 9 |
nervous system | 9.12e-07 | 89 |