FFCP PHASE1:Hg19::chr2:110873388..110873405,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7851 | |EntrezGene=7851 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6818 | |HGNC=6818 | ||
|TSSclassifier=strong | |||
|UniProt=F8WE57 | |UniProt=F8WE57 | ||
|association_with_transcript=0bp_to_ENST00000424988_5end | |association_with_transcript=0bp_to_ENST00000424988_5end | ||
|cluster_id=chr2:110873388..110873405,- | |||
|coexpression_cluster_id=C4117 | |||
|description=CAGE_peak_1_at_MALL_5end | |description=CAGE_peak_1_at_MALL_5end | ||
|id=chr2:110873388..110873405,- | |id=chr2:110873388..110873405,- | ||
|ontology_enrichment_celltype=CL:0000066!8.66e-17!254;CL:0000220!1.10e-11!246;CL:0002321!2.98e-11!248;CL:0002078!1.56e-10!44;CL:0000115!2.15e-10!35;CL:0002139!2.47e-10!24;CL:0002076!3.13e-09!43;CL:0000222!4.22e-09!119;CL:0000071!4.93e-09!18;CL:0002546!4.93e-09!18;CL:0000076!9.58e-09!62;CL:1000497!4.96e-08!18;CL:0002518!4.96e-08!18;CL:1000449!1.39e-07!16;CL:0000223!4.12e-07!59 | |ontology_enrichment_celltype=CL:0000066!8.66e-17!254;CL:0000220!1.10e-11!246;CL:0002321!2.98e-11!248;CL:0002078!1.56e-10!44;CL:0000115!2.15e-10!35;CL:0002139!2.47e-10!24;CL:0002076!3.13e-09!43;CL:0000222!4.22e-09!119;CL:0000071!4.93e-09!18;CL:0002546!4.93e-09!18;CL:0000076!9.58e-09!62;CL:1000497!4.96e-08!18;CL:0002518!4.96e-08!18;CL:1000449!1.39e-07!16;CL:0000223!4.12e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.08e-10;24!CL:0000115;8.59e-10;36!CL:0000071;2.38e-09;18!CL:1000497;1.71e-08;17!CL:0002518;1.71e-08;17!CL:1000449;4.73e-08;15!CL:0002078;9.89e-08;45!CL:0002076;2.25e-07;42!CL:0002681;4.49e-07;12!CL:0002584;4.49e-07;12!CL:0002368;9.25e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.25e-14,253;CL:0002078,1.04e-11,45;CL:0000115,1.50e-11,36;CL:0002321,5.63e-11,250;CL:0002139,1.15e-10,24;CL:0002076,4.69e-10,42;CL:0000222,1.80e-09,121;CL:0000071,2.56e-09,18;CL:0002546,2.56e-09,18;CL:0000076,1.53e-08,63;CL:1000497,1.65e-08,17;CL:0002518,1.65e-08,17;CL:1000449,4.61e-08,15;CL:0000223,8.81e-08,58;CL:0002681,4.39e-07,12;CL:0002584,4.39e-07,12;CL:0000213,4.56e-07,58;CL:0000215,4.56e-07,58;CL:0002368,9.02e-07,13 | |||
|ontology_enrichment_development_v019=CL:0002546;2.38e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!2.34e-25!241;UBERON:0000483!3.51e-24!309;UBERON:0000119!8.67e-24!312;UBERON:0000467!1.97e-22!625;UBERON:0000468!2.36e-22!659;UBERON:0000480!4.14e-22!626;UBERON:0000477!1.16e-21!286;UBERON:0000481!1.22e-20!347;UBERON:0000475!4.47e-20!365;UBERON:0003914!3.45e-18!118;UBERON:0000025!1.84e-17!194;UBERON:0002100!1.61e-15!216;UBERON:0004119!8.77e-15!169;UBERON:0000925!8.77e-15!169;UBERON:0006595!8.77e-15!169;UBERON:0000464!1.70e-14!104;UBERON:0003104!2.51e-14!238;UBERON:0009142!2.51e-14!238;UBERON:0000064!7.21e-14!219;UBERON:0004872!1.25e-13!84;UBERON:0000055!1.47e-13!69;UBERON:0002050!1.62e-13!605;UBERON:0005423!1.62e-13!605;UBERON:0000922!2.72e-13!612;UBERON:0000923!3.83e-13!604;UBERON:0005291!3.83e-13!604;UBERON:0006598!3.83e-13!604;UBERON:0002532!3.83e-13!604;UBERON:0003103!1.27e-12!69;UBERON:0001981!2.29e-12!60;UBERON:0007500!2.29e-12!60;UBERON:0004537!2.29e-12!60;UBERON:0006965!2.29e-12!60;UBERON:0002049!2.62e-12!79;UBERON:0007798!2.62e-12!79;UBERON:0000466!3.88e-12!126;UBERON:0001007!6.88e-12!155;UBERON:0001555!6.88e-12!155;UBERON:0007026!6.88e-12!155;UBERON:0004921!8.65e-12!129;UBERON:0004185!8.65e-12!129;UBERON:0000062!3.16e-11!511;UBERON:0000487!1.14e-10!22;UBERON:0000490!1.20e-10!138;UBERON:0001008!1.23e-10!45;UBERON:0005177!1.94e-10!107;UBERON:0006554!2.53e-10!44;UBERON:0003064!4.78e-10!37;UBERON:0009569!1.57e-09!113;UBERON:0006914!1.81e-09!25;UBERON:0001986!4.93e-09!18;UBERON:0004638!4.93e-09!18;UBERON:0004852!4.93e-09!18;UBERON:0000077!7.10e-09!130;UBERON:0005157!8.10e-09!51;UBERON:0002553!1.34e-08!70;UBERON:0000058!1.58e-08!26;UBERON:0001009!2.38e-08!113;UBERON:0003886!3.87e-08!63;UBERON:0005256!5.20e-08!143;UBERON:0000915!5.80e-08!52;UBERON:0004535!7.68e-08!110;UBERON:0001637!8.76e-08!42;UBERON:0003509!8.76e-08!42;UBERON:0004572!8.76e-08!42;UBERON:0004876!1.16e-07!20;UBERON:0004211!1.39e-07!16;UBERON:0001285!1.39e-07!16;UBERON:0007684!1.39e-07!16;UBERON:0003220!1.39e-07!16;UBERON:0004208!1.39e-07!16;UBERON:0001048!1.50e-07!168;UBERON:0006555!1.57e-07!17;UBERON:0005103!1.57e-07!17;UBERON:0000083!1.57e-07!17;UBERON:0009201!1.57e-07!17;UBERON:0004819!1.57e-07!17;UBERON:0006553!1.57e-07!17;UBERON:0003074!1.57e-07!17;UBERON:0003060!1.57e-07!17;UBERON:0000080!2.17e-07!18;UBERON:0002120!2.17e-07!18;UBERON:0004875!2.17e-07!18;UBERON:0005721!2.17e-07!18;UBERON:0005754!2.17e-07!18;UBERON:0007297!2.17e-07!18;UBERON:0005153!2.90e-07!37;UBERON:0005181!3.30e-07!35;UBERON:0000926!4.58e-07!448;UBERON:0004120!4.58e-07!448;UBERON:0006603!4.58e-07!448;UBERON:0005178!4.89e-07!34;UBERON:0002224!4.89e-07!34;UBERON:0000063!6.00e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;4.78e-11;22!UBERON:0006914;6.95e-10;25!UBERON:0004638;2.38e-09;18!UBERON:0001986;2.38e-09;18!UBERON:0004852;2.38e-09;18!UBERON:0003914;8.94e-09;74!UBERON:0000025;1.02e-08;93!UBERON:0000490;1.84e-08;33!UBERON:0006554;2.58e-08;30!UBERON:0001008;2.58e-08;30!UBERON:0006555;4.73e-08;15!UBERON:0004819;4.73e-08;15!UBERON:0001285;4.73e-08;15!UBERON:0007684;4.73e-08;15!UBERON:0007500;1.56e-07;56!UBERON:0001981;1.56e-07;56!UBERON:0004537;1.56e-07;56!UBERON:0000055;1.57e-07;65!UBERON:0001225;4.49e-07;12!UBERON:0008987;4.49e-07;12!UBERON:0000353;5.20e-07;15 | |||
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|phase1_expression=4.72363786103447,1.07050261945492,7.61153782118244,54.0395811106904,1.78784437770915,18.3191090061077,0,6.31719873426831,0.522371256399677,104.928390886144,444.499343998436,17.2568683982836,17.1448535848495,39.3577002412948,94.1168547067281,9.41255205032485,4.82155622419182,2.92124036154949,1.95173119516203,32.2577172161184,120.972409907842,2.5076377718247,1.14494394852423,11.3605772810494,2.63639543149086,0,0,0,0,0,0.928896739896456,86.4255951010192,121.385985267635,156.405946300551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.65939452896706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,60.9517165784904,8.71911117614727,2.68511379871414,119.636359439291,90.742161825096,133.403643962919,62.0323038699857,171.295474346528,0.945348171640679,9.97782288581538,7.81729592668822,21.3495893061272,562.107629835393,618.468450564428,0,0,0.132957960518865,0,0,0,120.05249404949,121.293077909964,127.400564089987,122.67182339751,82.2218894971416,108.121390482447,111.603312130657,155.308472260767,166.49861093738,34.476223114761,91.8450843008855,112.52027164634,10.2506064170231,112.504902585836,34.0259618110339,136.182085633222,240.695487455254,326.460681921151,121.120143598048,116.75967612688,104.791397528193,0,0,318.34865806405,7.45457927542978,78.0043951853811,13.1085089005087,167.512586517307,331.614937355464,40.9294648103884,1.06748995729705,10.853372130355,76.8691257437423,21.8231288752895,75.3559373353045,0.605429710579726,1.15235184896,2.57753575017176,0,24.5302883264113,2.09228152772521,7.63324241184472,1.45685649931318,1.68540968042698,0.204154171254893,0.737005903870608,0.103325781175765,0,0.989067717114227,47.3283908207774,16.5282172617735,0.336672227908132,1.25118519871964,0,2.19488810440419,0,2.55404700141215,56.7160915800105,34.2634204165726,0.85422955527427,14.6233011800098,276.984081685903,17.4158774412962,61.833729610951,92.127843884137,394.767841112322,366.850324431913,37.6126323623731,3.03764665519588,26.3483072614663,62.4816882829241,81.6091995643886,126.492201863624,64.5491249565411,51.5490167916677,27.8200457527334,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0,0,3.85944562915731,2.76269842704961,0,0.721879481669586,0.591534000199219,0.337169380156203,0.241011029883482,0.330881918197182,0.435758888184812,0.71181185733329,0.134831308160164,0.196221465125346,0.38474715694639,189.705951838535,91.1571529722398,18.520830509913,45.572700529518,0,0.982827216677626,1.77236972004421,0,19.5551617283551,29.8527989919434,115.457300249874,124.765946115958,242.777468374088,73.3300485655554,0.651616610620649,1.03993478527958,8.6598805215164,1.39116485970092,4.46153038096122,21.6549671641611,13.8895653772983,26.2550730083746,10.2726571734706,8.58486162094873,0,0,0,8.43604505880993,2.68771405118175,10.3495820986942,165.683267000269,77.8898955217418,87.4112508496681,0,0,0.829312462163088,0.864719720501769,0.50496973370552,3.6828778689458,0.763976851116555,0,5.13217338068116,0.411309970813294,0,0,0.784917590417525,1.30788020649984,0.66004457238855,0,0,3.381211010224,7.1803291477915,20.8014873822732,4.62973273671856,119.153270899554,7.19339883343468,0.142977993658148,0,0.823240336780769,7.16619605446217,0.355391948742546,0.791951872933429,12.9618932135622,2.61460037580088,36.2901957990867,0,0,0,0.718874566474748,0,38.511964360994,8.10775317338444,34.1090695433636,6.62525563987614,0,0,0,0,2.54094624222463,0,0,1.17261385734044,2.55175500661265,0,0,0,39.8747348087205,32.511083868879,9.76554085319048,1.24782516918484,0.535286966391485,0.157702415033935,0.117141414992713,0.902838299183157,0,6.2083842775503,13.2845119707087,9.40282759562686,1.91143951829782,2.15381273209015,0.686286847621712,0,0,0,6.66880657181771,6.65741758041988,3.62868351995616,10.6686357362074,5.52463103837025,8.98112302185835,25.7559690003959,129.973641262943,44.3956822356357,126.155356478242,2.00472601943452,5.68197521002007,14.9471423945133,2.59627214591811,56.1296127961603,10.877350463246,45.5149687588457,334.898556759855,107.695952378401,29.3166780490814,20.8487819785484,121.372695872094,36.7363157988058,90.9845732245152,90.6063192850216,39.1596543192569,376.457501274668,362.639779649531,107.742042134968,126.466347206037,247.915990352625,204.187737958925,66.522707264755,45.7091804910798,36.2677102649929,0,0,7.69350375349168,50.8422700834544,0.650756789328606,16.692643886931,0,0,43.6441808877091,38.3535545161548,19.2820715812991,1.83674364755032,4.00526404498075,3.53058451870098,1.10269257987624,0.214840489736547,1.45016693914229,5.02837101754995,0.0890320356467374,75.700491235328,95.5184634804578,18.1210051742309,92.154738359406,44.1603271832421,83.7400842569503,14.6377826733726,26.7989214753197,5.32306030317022,9.5692629128258,9.82218361250776,2.57624796135584,0.372158369359667,0.632758849437452,0,24.0543923832654,6.84702380854273,66.1862755685949,7.06453776179307,3.05783177891635,20.86481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| ||
|short_description=p1@MALL | |short_description=p1@MALL | ||
}} | }} |
Latest revision as of 07:38, 16 September 2015
Short description: | p1@MALL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MALL_5end |
Coexpression cluster: | C4117_Urothelial_small_Corneal_tubular_Smooth_cervical_pharyngeal |
Association with transcript: | 0bp_to_ENST00000424988_5end |
EntrezGene: | MALL |
HGNC: | 6818 |
UniProt: | F8WE57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.25e-14 | 253 |
meso-epithelial cell | 1.04e-11 | 45 |
endothelial cell | 1.50e-11 | 36 |
embryonic cell | 5.63e-11 | 250 |
endothelial cell of vascular tree | 1.15e-10 | 24 |
endo-epithelial cell | 4.69e-10 | 42 |
mesodermal cell | 1.80e-09 | 121 |
blood vessel endothelial cell | 2.56e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.56e-09 | 18 |
squamous epithelial cell | 1.53e-08 | 63 |
kidney cell | 1.65e-08 | 17 |
kidney epithelial cell | 1.65e-08 | 17 |
epithelial cell of nephron | 4.61e-08 | 15 |
endodermal cell | 8.81e-08 | 58 |
kidney cortical cell | 4.39e-07 | 12 |
renal cortical epithelial cell | 4.39e-07 | 12 |
lining cell | 4.56e-07 | 58 |
barrier cell | 4.56e-07 | 58 |
respiratory epithelial cell | 9.02e-07 | 13 |