FFCP PHASE1:Hg19::chr10:112678692..112678695,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92482 | |EntrezGene=92482 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=28093 | |HGNC=28093 | ||
|TSSclassifier=strong | |||
|UniProt=A8MTZ0 | |UniProt=A8MTZ0 | ||
|association_with_transcript=0bp_to_NM_001195306,uc009xxw.2_5end | |association_with_transcript=0bp_to_NM_001195306,uc009xxw.2_5end | ||
|cluster_id=chr10:112678692..112678695,- | |||
|description=CAGE_peak_4_at_BBIP1_5end | |description=CAGE_peak_4_at_BBIP1_5end | ||
|id=chr10:112678692..112678695,- | |id=chr10:112678692..112678695,- | ||
|ontology_enrichment_celltype=CL:0000839!1.83e-08!70;CL:0002194!4.68e-08!63;CL:0000576!4.68e-08!63;CL:0000040!4.68e-08!63;CL:0000559!4.68e-08!63;CL:0000557!1.31e-07!71;CL:0000860!1.33e-07!45;CL:0002009!2.19e-07!65;CL:0000766!3.16e-07!76;CL:0002057!5.60e-07!42 | |ontology_enrichment_celltype=CL:0000839!1.83e-08!70;CL:0002194!4.68e-08!63;CL:0000576!4.68e-08!63;CL:0000040!4.68e-08!63;CL:0000559!4.68e-08!63;CL:0000557!1.31e-07!71;CL:0000860!1.33e-07!45;CL:0002009!2.19e-07!65;CL:0000766!3.16e-07!76;CL:0002057!5.60e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000228;2.20e-07;1!CL:0002372;2.20e-07;1 | |ontology_enrichment_celltype_v019=CL:0000228;2.20e-07;1!CL:0002372;2.20e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000228,1.51e-07,1;CL:0002372,1.51e-07,1;CL:0000473,5.22e-07,48;CL:0000234,5.22e-07,48 | |||
|ontology_enrichment_development_v019=UBERON:0000358;7.72e-08;1!UBERON:0005425;2.20e-07;1 | |ontology_enrichment_development_v019=UBERON:0000358;7.72e-08;1!UBERON:0005425;2.20e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.73e-14!57;UBERON:0005068!6.73e-14!57;UBERON:0006241!6.73e-14!57;UBERON:0007135!6.73e-14!57;UBERON:0000073!1.01e-11!94;UBERON:0001016!1.01e-11!94;UBERON:0002780!1.69e-11!41;UBERON:0001890!1.69e-11!41;UBERON:0006240!1.69e-11!41;UBERON:0003080!6.56e-11!42;UBERON:0001017!6.82e-11!82;UBERON:0003075!7.70e-11!86;UBERON:0007284!7.70e-11!86;UBERON:0005743!8.86e-11!86;UBERON:0002346!2.41e-10!90;UBERON:0002616!3.72e-10!59;UBERON:0001893!4.02e-10!34;UBERON:0002020!4.28e-10!34;UBERON:0003528!4.28e-10!34;UBERON:0000955!7.31e-10!69;UBERON:0006238!7.31e-10!69;UBERON:0002791!1.45e-09!33;UBERON:0000062!3.98e-09!511;UBERON:0001869!4.07e-09!32;UBERON:0000922!1.93e-08!612;UBERON:0004121!2.01e-08!169;UBERON:0000924!3.25e-08!173;UBERON:0006601!3.25e-08!173;UBERON:0003056!4.48e-08!61;UBERON:0002050!8.98e-08!605;UBERON:0005423!8.98e-08!605;UBERON:0000923!1.51e-07!604;UBERON:0005291!1.51e-07!604;UBERON:0006598!1.51e-07!604;UBERON:0002532!1.51e-07!604;UBERON:0000033!2.77e-07!123;UBERON:0000153!8.04e-07!129;UBERON:0007811!8.04e-07!129 | |ontology_enrichment_uberon=UBERON:0001049!6.73e-14!57;UBERON:0005068!6.73e-14!57;UBERON:0006241!6.73e-14!57;UBERON:0007135!6.73e-14!57;UBERON:0000073!1.01e-11!94;UBERON:0001016!1.01e-11!94;UBERON:0002780!1.69e-11!41;UBERON:0001890!1.69e-11!41;UBERON:0006240!1.69e-11!41;UBERON:0003080!6.56e-11!42;UBERON:0001017!6.82e-11!82;UBERON:0003075!7.70e-11!86;UBERON:0007284!7.70e-11!86;UBERON:0005743!8.86e-11!86;UBERON:0002346!2.41e-10!90;UBERON:0002616!3.72e-10!59;UBERON:0001893!4.02e-10!34;UBERON:0002020!4.28e-10!34;UBERON:0003528!4.28e-10!34;UBERON:0000955!7.31e-10!69;UBERON:0006238!7.31e-10!69;UBERON:0002791!1.45e-09!33;UBERON:0000062!3.98e-09!511;UBERON:0001869!4.07e-09!32;UBERON:0000922!1.93e-08!612;UBERON:0004121!2.01e-08!169;UBERON:0000924!3.25e-08!173;UBERON:0006601!3.25e-08!173;UBERON:0003056!4.48e-08!61;UBERON:0002050!8.98e-08!605;UBERON:0005423!8.98e-08!605;UBERON:0000923!1.51e-07!604;UBERON:0005291!1.51e-07!604;UBERON:0006598!1.51e-07!604;UBERON:0002532!1.51e-07!604;UBERON:0000033!2.77e-07!123;UBERON:0000153!8.04e-07!129;UBERON:0007811!8.04e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0005162;4.30e-13;2!UBERON:0000122;4.30e-13;2!UBERON:0002021;1.78e-11;5!UBERON:0002336;2.20e-07;1!UBERON:0003112;2.20e-07;1!UBERON:0000941;2.20e-07;1!UBERON:0001785;2.20e-07;1!UBERON:0002464;2.20e-07;1!UBERON:0004904;2.20e-07;1!UBERON:0011215;2.20e-07;1!UBERON:0001018;2.20e-07;1!UBERON:0011158;2.20e-07;1!UBERON:0001021;2.20e-07;1!UBERON:0002473;2.20e-07;1!UBERON:0005340;2.20e-07;1!UBERON:0003544;2.20e-07;1!UBERON:0005970;2.20e-07;1!UBERON:0002316;2.20e-07;1!UBERON:0001020;2.20e-07;1!UBERON:0003128;2.20e-07;1!UBERON:0002437;2.20e-07;1!UBERON:0001703;2.20e-07;1!UBERON:0002241;2.20e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0005162;4.30e-13;2!UBERON:0000122;4.30e-13;2!UBERON:0002021;1.78e-11;5!UBERON:0002336;2.20e-07;1!UBERON:0003112;2.20e-07;1!UBERON:0000941;2.20e-07;1!UBERON:0001785;2.20e-07;1!UBERON:0002464;2.20e-07;1!UBERON:0004904;2.20e-07;1!UBERON:0011215;2.20e-07;1!UBERON:0001018;2.20e-07;1!UBERON:0011158;2.20e-07;1!UBERON:0001021;2.20e-07;1!UBERON:0002473;2.20e-07;1!UBERON:0005340;2.20e-07;1!UBERON:0003544;2.20e-07;1!UBERON:0005970;2.20e-07;1!UBERON:0002316;2.20e-07;1!UBERON:0001020;2.20e-07;1!UBERON:0003128;2.20e-07;1!UBERON:0002437;2.20e-07;1!UBERON:0001703;2.20e-07;1!UBERON:0002241;2.20e-07;1 | ||
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| ||
|short_description=p4@BBIP1 | |short_description=p4@BBIP1 | ||
}} | }} |
Latest revision as of 09:31, 16 September 2015
Short description: | p4@BBIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BBIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001195306, uc009xxw.2_5end |
EntrezGene: | BBIP1 |
HGNC: | 28093 |
UniProt: | A8MTZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 1.51e-07 | 1 |
myotube | 1.51e-07 | 1 |
defensive cell | 5.22e-07 | 48 |
phagocyte | 5.22e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 5.53e-13 | 2 |
neuron projection bundle | 5.53e-13 | 2 |
occipital lobe | 2.86e-11 | 5 |
cranial nerve II | 1.42e-07 | 1 |
cranial nerve | 1.42e-07 | 1 |
nerve trunk | 1.42e-07 | 1 |
nerve connecting eye with brain | 1.42e-07 | 1 |
nerve | 1.42e-07 | 1 |
retinal neural layer | 1.42e-07 | 1 |
presumptive neural retina | 1.42e-07 | 1 |
olfactory region | 2.07e-07 | 1 |
primary subdivision of skull | 2.07e-07 | 1 |
cranium | 2.07e-07 | 1 |
neurocranium | 2.07e-07 | 1 |
chondrocranium | 2.07e-07 | 1 |
cartilaginous neurocranium | 2.07e-07 | 1 |
head paraxial mesoderm | 2.07e-07 | 1 |
nervous system | 3.45e-07 | 89 |
neural tube | 4.14e-07 | 56 |
neural rod | 4.14e-07 | 56 |
future spinal cord | 4.14e-07 | 56 |
neural keel | 4.14e-07 | 56 |
corpus callosum | 4.34e-07 | 1 |
central nervous system cell part cluster | 4.34e-07 | 1 |
axon tract | 4.34e-07 | 1 |
intercerebral commissure | 4.34e-07 | 1 |
dorsal telencephalic commissure | 4.34e-07 | 1 |
brain white matter | 4.34e-07 | 1 |
brain commissure | 4.34e-07 | 1 |
white matter | 4.34e-07 | 1 |
nervous system commissure | 4.34e-07 | 1 |
cerebral hemisphere white matter | 4.34e-07 | 1 |
central nervous system | 8.52e-07 | 81 |