FFCP PHASE1:Hg19::chr16:3115626..3115648,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9235 | |EntrezGene=9235 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16830 | |HGNC=16830 | ||
|TSSclassifier=strong | |||
|UniProt=A8MPX0,E9PK07,E9PIV2,A6NNM0 | |UniProt=A8MPX0,E9PK07,E9PIV2,A6NNM0 | ||
|association_with_transcript=0bp_to_ENST00000008180,ENST00000396890,ENST00000525228,ENST00000525377,ENST00000532247,ENST00000534748,ENST00000548652,NM_001012634_5end | |association_with_transcript=0bp_to_ENST00000008180,ENST00000396890,ENST00000525228,ENST00000525377,ENST00000532247,ENST00000534748,ENST00000548652,NM_001012634_5end | ||
|cluster_id=chr16:3115626..3115648,+ | |||
|coexpression_cluster_id=C239 | |coexpression_cluster_id=C239 | ||
|description=CAGE_peak_1_at_IL32_5end | |description=CAGE_peak_1_at_IL32_5end | ||
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|ontology_enrichment_celltype=CL:0000791!2.66e-12!18;CL:0000789!2.66e-12!18;CL:0002420!2.66e-12!18;CL:0002419!2.66e-12!18;CL:0000790!2.66e-12!18;CL:0000084!5.99e-12!25;CL:0000827!5.99e-12!25;CL:0000213!1.03e-09!57;CL:0000215!1.03e-09!57;CL:0000222!3.81e-09!119;CL:0002078!5.92e-09!44;CL:0000625!2.71e-08!11;CL:0000115!3.76e-08!35;CL:1000497!4.60e-08!18;CL:0002518!4.60e-08!18;CL:1000449!2.68e-07!16;CL:0000838!4.36e-07!52;CL:0002139!9.15e-07!24 | |ontology_enrichment_celltype=CL:0000791!2.66e-12!18;CL:0000789!2.66e-12!18;CL:0002420!2.66e-12!18;CL:0002419!2.66e-12!18;CL:0000790!2.66e-12!18;CL:0000084!5.99e-12!25;CL:0000827!5.99e-12!25;CL:0000213!1.03e-09!57;CL:0000215!1.03e-09!57;CL:0000222!3.81e-09!119;CL:0002078!5.92e-09!44;CL:0000625!2.71e-08!11;CL:0000115!3.76e-08!35;CL:1000497!4.60e-08!18;CL:0002518!4.60e-08!18;CL:1000449!2.68e-07!16;CL:0000838!4.36e-07!52;CL:0002139!9.15e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.94e-12;18!CL:0000789;1.94e-12;18!CL:0002419;1.94e-12;18!CL:0000084;4.62e-12;25!CL:1000497;4.06e-09;17!CL:0002518;4.06e-09;17!CL:0000625;2.22e-08;11!CL:1000449;2.39e-08;15!CL:0000115;1.81e-07;36!CL:0002139;8.13e-07;24 | |ontology_enrichment_celltype_v019=CL:0000791;1.94e-12;18!CL:0000789;1.94e-12;18!CL:0002419;1.94e-12;18!CL:0000084;4.62e-12;25!CL:1000497;4.06e-09;17!CL:0002518;4.06e-09;17!CL:0000625;2.22e-08;11!CL:1000449;2.39e-08;15!CL:0000115;1.81e-07;36!CL:0002139;8.13e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.99e-12,18;CL:0000789,1.99e-12,18;CL:0002420,1.99e-12,18;CL:0002419,1.99e-12,18;CL:0000790,1.99e-12,18;CL:0000084,4.74e-12,25;CL:0000827,4.74e-12,25;CL:0000213,5.81e-10,58;CL:0000215,5.81e-10,58;CL:0002078,2.75e-09,45;CL:1000497,4.14e-09,17;CL:0002518,4.14e-09,17;CL:0000222,5.80e-09,121;CL:0000115,1.59e-08,36;CL:0000625,2.25e-08,11;CL:1000449,2.43e-08,15;CL:0000838,3.96e-07,52;CL:0002139,7.94e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;1.94e-12;18 | |ontology_enrichment_development_v019=CL:0000790;1.94e-12;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@IL32 | |short_description=p1@IL32 | ||
}} | }} |
Latest revision as of 11:28, 16 September 2015
Short description: | p1@IL32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IL32_5end |
Coexpression cluster: | C239_CD4_lymphangiectasia_CD8_NK_mycosis_Renal_hairy |
Association with transcript: | 0bp_to_ENST00000008180, ENST00000396890, ENST00000525228, ENST00000525377, ENST00000532247, ENST00000534748, ENST00000548652, NM_001012634_5end |
EntrezGene: | IL32 |
HGNC: | 16830 |
UniProt: | A8MPX0E9PK07E9PIV2A6NNM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.99e-12 | 18 |
alpha-beta T cell | 1.99e-12 | 18 |
immature T cell | 1.99e-12 | 18 |
mature T cell | 1.99e-12 | 18 |
immature alpha-beta T cell | 1.99e-12 | 18 |
T cell | 4.74e-12 | 25 |
pro-T cell | 4.74e-12 | 25 |
lining cell | 5.81e-10 | 58 |
barrier cell | 5.81e-10 | 58 |
meso-epithelial cell | 2.75e-09 | 45 |
kidney cell | 4.14e-09 | 17 |
kidney epithelial cell | 4.14e-09 | 17 |
mesodermal cell | 5.80e-09 | 121 |
endothelial cell | 1.59e-08 | 36 |
CD8-positive, alpha-beta T cell | 2.25e-08 | 11 |
epithelial cell of nephron | 2.43e-08 | 15 |
lymphoid lineage restricted progenitor cell | 3.96e-07 | 52 |
endothelial cell of vascular tree | 7.94e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 4.84e-15 | 117 |
abdomen element | 1.15e-11 | 54 |
abdominal segment element | 1.15e-11 | 54 |
abdominal segment of trunk | 7.08e-11 | 60 |
abdomen | 7.08e-11 | 60 |
circulatory system | 3.55e-10 | 112 |
cardiovascular system | 3.63e-10 | 109 |
gut epithelium | 3.19e-09 | 54 |
vessel | 5.29e-09 | 68 |
nephron epithelium | 2.43e-08 | 15 |
renal tubule | 2.43e-08 | 15 |
nephron tubule | 2.43e-08 | 15 |
nephron | 2.43e-08 | 15 |
uriniferous tubule | 2.43e-08 | 15 |
nephrogenic mesenchyme | 2.43e-08 | 15 |
excretory tube | 2.77e-08 | 16 |
kidney epithelium | 2.77e-08 | 16 |
unilaminar epithelium | 8.62e-08 | 148 |
mesenchyme | 1.07e-07 | 160 |
entire embryonic mesenchyme | 1.07e-07 | 160 |
blood | 1.46e-07 | 15 |
haemolymphatic fluid | 1.46e-07 | 15 |
organism substance | 1.46e-07 | 15 |
parenchyma | 1.61e-07 | 15 |
urinary system structure | 2.07e-07 | 47 |
renal system | 2.30e-07 | 48 |
compound organ | 2.95e-07 | 68 |
endo-epithelium | 4.25e-07 | 82 |