FFCP PHASE1:Hg19::chr3:16306691..16306752,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:16306691..16306752,+ to FFCP PHASE1:Hg19::chr3:16306691..16306752,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=92106 | |EntrezGene=92106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25128 | |HGNC=25128 | ||
|TSSclassifier=strong | |||
|UniProt=Q96HP4,C9JLB7,F8WBF3,F8WB50 | |UniProt=Q96HP4,C9JLB7,F8WBF3,F8WB50 | ||
|association_with_transcript=0bp_to_ENST00000285083,ENST00000435829,ENST00000442255,ENST00000452581,ENST00000486267,uc003caw.2,uc003cax.2,uc010her.1_5end | |||
|cluster_id=chr3:16306691..16306752,+ | |||
|description=CAGE_peak_1_at_OXNAD1_5end | |||
|id=chr3:16306691..16306752,+ | |||
|ontology_enrichment_celltype=CL:0000542!8.95e-07!53;CL:0000051!8.95e-07!53 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.95e-07,53;CL:0000051,8.95e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!8.54e-18!235;DOID:14566!5.54e-17!239;DOID:2531!2.72e-12!51;DOID:0060083!2.72e-12!51;DOID:305!1.07e-10!106;DOID:1240!1.50e-10!39;DOID:0050687!2.08e-10!143;DOID:8692!4.53e-08!31;DOID:0050686!8.79e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;9.79e-09;39!DOID:2531;5.93e-08;51!DOID:0060083;5.93e-08;51!DOID:8692;7.41e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.54e-18,235;DOID:14566,5.54e-17,239;DOID:2531,2.72e-12,51;DOID:0060083,2.72e-12,51;DOID:305,1.07e-10,106;DOID:1240,1.50e-10,39;DOID:0050687,2.08e-10,143;DOID:8692,4.53e-08,31;DOID:0050686,8.79e-08,137 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.96e-08;41!UBERON:0001890;1.96e-08;41!UBERON:0001893;2.22e-08;34!UBERON:0001869;2.28e-08;32!UBERON:0002791;2.48e-08;32!UBERON:0003528;3.59e-08;34!UBERON:0002020;3.59e-08;34!UBERON:0002619;2.13e-07;22!UBERON:0001950;2.57e-07;20!UBERON:0000073;8.21e-07;53!UBERON:0002616;8.21e-07;53!UBERON:0000956;8.56e-07;25!UBERON:0000203;8.56e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.42e-11,41;UBERON:0001890,1.42e-11,41;UBERON:0003080,1.42e-11,41;UBERON:0006240,1.42e-11,41;UBERON:0001049,2.18e-11,56;UBERON:0005068,2.18e-11,56;UBERON:0006241,2.18e-11,56;UBERON:0007135,2.18e-11,56;UBERON:0000073,2.95e-11,53;UBERON:0002616,2.95e-11,53;UBERON:0001893,1.40e-09,34;UBERON:0003528,2.75e-09,34;UBERON:0002020,2.75e-09,34;UBERON:0002791,4.36e-09,32;UBERON:0001869,4.52e-09,32;UBERON:0011216,9.27e-08,223;UBERON:0000955,1.43e-07,68;UBERON:0006238,1.43e-07,68;UBERON:0001017,1.58e-07,81;UBERON:0001016,1.91e-07,89;UBERON:0002619,2.51e-07,22;UBERON:0001950,2.77e-07,20;UBERON:0007023,4.89e-07,114;UBERON:0000956,9.00e-07,25;UBERON:0000203,9.00e-07,25 | |||
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| ||
|short_description=p1@OXNAD1 | |||
}} | }} |
Latest revision as of 11:57, 16 September 2015
Short description: | p1@OXNAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OXNAD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000285083, ENST00000435829, ENST00000442255, ENST00000452581, ENST00000486267, uc003caw.2, uc003cax.2, uc010her.1_5end |
EntrezGene: | OXNAD1 |
HGNC: | 25128 |
UniProt: | Q96HP4C9JLB7F8WBF3F8WB50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.95e-07 | 53 |
common lymphoid progenitor | 8.95e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 1.42e-11 | 41 |
forebrain | 1.42e-11 | 41 |
anterior neural tube | 1.42e-11 | 41 |
future forebrain | 1.42e-11 | 41 |
neural tube | 2.18e-11 | 56 |
neural rod | 2.18e-11 | 56 |
future spinal cord | 2.18e-11 | 56 |
neural keel | 2.18e-11 | 56 |
regional part of nervous system | 2.95e-11 | 53 |
regional part of brain | 2.95e-11 | 53 |
telencephalon | 1.40e-09 | 34 |
brain grey matter | 2.75e-09 | 34 |
gray matter | 2.75e-09 | 34 |
regional part of telencephalon | 4.36e-09 | 32 |
cerebral hemisphere | 4.52e-09 | 32 |
organ system subdivision | 9.27e-08 | 223 |
brain | 1.43e-07 | 68 |
future brain | 1.43e-07 | 68 |
central nervous system | 1.58e-07 | 81 |
nervous system | 1.91e-07 | 89 |
regional part of cerebral cortex | 2.51e-07 | 22 |
neocortex | 2.77e-07 | 20 |
adult organism | 4.89e-07 | 114 |
cerebral cortex | 9.00e-07 | 25 |
pallium | 9.00e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.54e-18 | 235 |
disease of cellular proliferation | 5.54e-17 | 239 |
hematologic cancer | 2.72e-12 | 51 |
immune system cancer | 2.72e-12 | 51 |
carcinoma | 1.07e-10 | 106 |
leukemia | 1.50e-10 | 39 |
cell type cancer | 2.08e-10 | 143 |
myeloid leukemia | 4.53e-08 | 31 |
organ system cancer | 8.79e-08 | 137 |